| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944225
Identifier: 119944225
GI number: 119944225
Start: 569828
End: 571756
Strand: Reverse
Name: 119944225
Synonym: Ping_0448
Alternate gene names: NA
Gene position: 571756-569828 (Counterclockwise)
Preceding gene: 119944226
Following gene: 119944224
Centisome position: 12.54
GC content: 33.85
Gene sequence:
>1929_bases ATGAAATTAAAAATAACTATAATATTACTTGGCTTTTATTGTATTTTTATCAATGCACTAACGGGGTCAATTCTTGTACC AACGTTTCACTTGGATGGTGCTTTTCAGACTGCCAGTGGTTTATTTCGCCTAGACTCAGGACAACTACCGGGGAAAGATT TTTTCCCCTATTTAGGTATCGGCCCCATTTTAATAATTTTCCCTGTTTTTAAACTGGCAGGAAGTGATCTCATTGCAAGT TCATTTTCAACACTATTTGTCACAAGAGTTTTAGCCTGGGTTTCTGTGTCACTAGTTGTGCATTTAATTTTAAGAAGTAA ATCGTTTATATCATCACTCTGCATAGGAATAATTCTGTTGATAATCCTTATAGGAATTGACAAGAGTGGATTTTTCATCA ATAAACCATTTTCTTTTTTAATCGACCCAGGCACCTCATTAAGACCAGTGAGGGCTTCTGCACCCTATTTGCTTGGAATA CTCAGCTATTTTATAGTAACCACTTCCATCCCCTATTCTTTAAAAAAGTATTTGGCTGGAGTATCAGCGGGTATATTTCT GCTTTGGTCAAATGACTATGCATTACCAACAGTTGCAACGTTTTCTCTATTTTTTTGTATTTACTTTTATAAAAATTCTG CAACTAACTGGCTCAAAGATGCGCTAGTATTTTCCTTAATTTTAATATCAACATGGCTAGTGCTTTTGTTGTTGATAACC GCGGGACATCCATTAGAGTTATTAAAATATAATTTCAGAGATGTTGCGACTGATCAATGGTGGTATTTCAGCCCTTATTA CGATCGTATATTCCATTTATCAGACCTTGGAAAATTGATAAATGCAGATCTACTCATACTACTAGTATTTTCCATTTATG CTTACAAGACAAAATACATTGAATCAATAATTTTATGTATAATTGGTTTTGCCCTATTCTTTGGCGGAGTCCTTGCATCT ATAGGCGGCCACTTTACCAAAATTTATTTTAACGCTTATCATGCTTGGGCAATAATAATAGCTATTATTTTCACAATAAA CTTAATTGTTAAATTAATTAGTAAAAATATCCAATCAAATCAAATTTTATTCCTAAGAAACTTAGTCAGCCCTAGCATTA TAATTTGCCTACTTATGGTAGCTTCGGCTGGCTCCTATAAGTATTATCGTAATTTAAATAGTGTTCAAAACAATAAGTAT TTTTATTATATTGATGAGTTTGGAGGGTACTTAAATGTTAAGTGGAAAGACTATATAGAGTTCATTAAGCTTAATAAACA CAAACCTATCATTGAGGAATATTGGGGCTTAGCCAGTGCATTAAATAGAACATTCTCACCCTGGCCCGTTGATTCGGTTA TTCATGCTTTAGGTGACGTGAGAAAAAAAGCCCAAGATAGCTTGGTTAAGGCAGATTATATAATCACTTCAAAAAATGGT AATTTTTCCATTTGGCAACCTTGGAGCGTAAGCCAAAATTTTTGGTTTTATAAAACGTTATTTTCAGAATGGGAACCCAT TTTTCACTCACCTGCAACCACCATTTGGAAAAAGCTCCCACATAAGCGAACAGAGCAAAATGTGGAATGTGAAATTACTA AAAATAGAGATGCATTTACCATAAAAACAGATAAAACCGGTTTAATTAATGTGAAGCTGAATTATTCAATAACCGCTAAA GGCCGTTACTTATCTATGGTAAAAAACAATTTATCCTATGCTTCTGATGCTGCCGGCTATGTTTCTATAAATCCAAAATC AGATAATGCCTTTTTTCCAGTCCTTAGCAAAGGAGATGAGAATGAAATTTATGATGCGAAAATTGTTGGTAGCGATAATG GTGAAATAATTATCGAGTCATGTGAAGCGTCTCGATTTATCATTGACCTTGACGATGAGGATGAAATTTACCCTTCAGTC TTTAAATAA
Upstream 100 bases:
>100_bases ATGAGCGAAATAGCTCTGTGATGTTAGATGAAGATCGCAGTAATGTGTTATTTACTTCTTTGGGTGAAAGTGTAAACAAC AGCCAAACAGGTAGAAATCG
Downstream 100 bases:
>100_bases TAAGCACTCATTTCCAAAATAAATAATGTGTATTATCAATACAAAATTAAGCGACAGAAAACAGGTGGAAATATATGGTG AATAAACCTAAGTACTACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MKLKITIILLGFYCIFINALTGSILVPTFHLDGAFQTASGLFRLDSGQLPGKDFFPYLGIGPILIIFPVFKLAGSDLIAS SFSTLFVTRVLAWVSVSLVVHLILRSKSFISSLCIGIILLIILIGIDKSGFFINKPFSFLIDPGTSLRPVRASAPYLLGI LSYFIVTTSIPYSLKKYLAGVSAGIFLLWSNDYALPTVATFSLFFCIYFYKNSATNWLKDALVFSLILISTWLVLLLLIT AGHPLELLKYNFRDVATDQWWYFSPYYDRIFHLSDLGKLINADLLILLVFSIYAYKTKYIESIILCIIGFALFFGGVLAS IGGHFTKIYFNAYHAWAIIIAIIFTINLIVKLISKNIQSNQILFLRNLVSPSIIICLLMVASAGSYKYYRNLNSVQNNKY FYYIDEFGGYLNVKWKDYIEFIKLNKHKPIIEEYWGLASALNRTFSPWPVDSVIHALGDVRKKAQDSLVKADYIITSKNG NFSIWQPWSVSQNFWFYKTLFSEWEPIFHSPATTIWKKLPHKRTEQNVECEITKNRDAFTIKTDKTGLINVKLNYSITAK GRYLSMVKNNLSYASDAAGYVSINPKSDNAFFPVLSKGDENEIYDAKIVGSDNGEIIIESCEASRFIIDLDDEDEIYPSV FK
Sequences:
>Translated_642_residues MKLKITIILLGFYCIFINALTGSILVPTFHLDGAFQTASGLFRLDSGQLPGKDFFPYLGIGPILIIFPVFKLAGSDLIAS SFSTLFVTRVLAWVSVSLVVHLILRSKSFISSLCIGIILLIILIGIDKSGFFINKPFSFLIDPGTSLRPVRASAPYLLGI LSYFIVTTSIPYSLKKYLAGVSAGIFLLWSNDYALPTVATFSLFFCIYFYKNSATNWLKDALVFSLILISTWLVLLLLIT AGHPLELLKYNFRDVATDQWWYFSPYYDRIFHLSDLGKLINADLLILLVFSIYAYKTKYIESIILCIIGFALFFGGVLAS IGGHFTKIYFNAYHAWAIIIAIIFTINLIVKLISKNIQSNQILFLRNLVSPSIIICLLMVASAGSYKYYRNLNSVQNNKY FYYIDEFGGYLNVKWKDYIEFIKLNKHKPIIEEYWGLASALNRTFSPWPVDSVIHALGDVRKKAQDSLVKADYIITSKNG NFSIWQPWSVSQNFWFYKTLFSEWEPIFHSPATTIWKKLPHKRTEQNVECEITKNRDAFTIKTDKTGLINVKLNYSITAK GRYLSMVKNNLSYASDAAGYVSINPKSDNAFFPVLSKGDENEIYDAKIVGSDNGEIIIESCEASRFIIDLDDEDEIYPSV FK >Mature_642_residues MKLKITIILLGFYCIFINALTGSILVPTFHLDGAFQTASGLFRLDSGQLPGKDFFPYLGIGPILIIFPVFKLAGSDLIAS SFSTLFVTRVLAWVSVSLVVHLILRSKSFISSLCIGIILLIILIGIDKSGFFINKPFSFLIDPGTSLRPVRASAPYLLGI LSYFIVTTSIPYSLKKYLAGVSAGIFLLWSNDYALPTVATFSLFFCIYFYKNSATNWLKDALVFSLILISTWLVLLLLIT AGHPLELLKYNFRDVATDQWWYFSPYYDRIFHLSDLGKLINADLLILLVFSIYAYKTKYIESIILCIIGFALFFGGVLAS IGGHFTKIYFNAYHAWAIIIAIIFTINLIVKLISKNIQSNQILFLRNLVSPSIIICLLMVASAGSYKYYRNLNSVQNNKY FYYIDEFGGYLNVKWKDYIEFIKLNKHKPIIEEYWGLASALNRTFSPWPVDSVIHALGDVRKKAQDSLVKADYIITSKNG NFSIWQPWSVSQNFWFYKTLFSEWEPIFHSPATTIWKKLPHKRTEQNVECEITKNRDAFTIKTDKTGLINVKLNYSITAK GRYLSMVKNNLSYASDAAGYVSINPKSDNAFFPVLSKGDENEIYDAKIVGSDNGEIIIESCEASRFIIDLDDEDEIYPSV FK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72789; Mature: 72789
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKITIILLGFYCIFINALTGSILVPTFHLDGAFQTASGLFRLDSGQLPGKDFFPYLGI CEEEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCEEECCCCCCCCCCCCCCCC GPILIIFPVFKLAGSDLIASSFSTLFVTRVLAWVSVSLVVHLILRSKSFISSLCIGIILL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILIGIDKSGFFINKPFSFLIDPGTSLRPVRASAPYLLGILSYFIVTTSIPYSLKKYLAG HHHHCCCCCCCEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCC VSAGIFLLWSNDYALPTVATFSLFFCIYFYKNSATNWLKDALVFSLILISTWLVLLLLIT CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGHPLELLKYNFRDVATDQWWYFSPYYDRIFHLSDLGKLINADLLILLVFSIYAYKTKYI CCCCHHHHHCCCHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESIILCIIGFALFFGGVLASIGGHFTKIYFNAYHAWAIIIAIIFTINLIVKLISKNIQSN HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QILFLRNLVSPSIIICLLMVASAGSYKYYRNLNSVQNNKYFYYIDEFGGYLNVKWKDYIE CEEEEHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEECCCCEEEEEHHHHHH FIKLNKHKPIIEEYWGLASALNRTFSPWPVDSVIHALGDVRKKAQDSLVKADYIITSKNG HHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCC NFSIWQPWSVSQNFWFYKTLFSEWEPIFHSPATTIWKKLPHKRTEQNVECEITKNRDAFT CEEEECCCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHCCCCCCCCCCEEEEECCCCEEE IKTDKTGLINVKLNYSITAKGRYLSMVKNNLSYASDAAGYVSINPKSDNAFFPVLSKGDE EEECCCEEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEECCCCC NEIYDAKIVGSDNGEIIIESCEASRFIIDLDDEDEIYPSVFK CCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MKLKITIILLGFYCIFINALTGSILVPTFHLDGAFQTASGLFRLDSGQLPGKDFFPYLGI CEEEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCEEECCCCCCCCCCCCCCCC GPILIIFPVFKLAGSDLIASSFSTLFVTRVLAWVSVSLVVHLILRSKSFISSLCIGIILL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILIGIDKSGFFINKPFSFLIDPGTSLRPVRASAPYLLGILSYFIVTTSIPYSLKKYLAG HHHHCCCCCCCEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCC VSAGIFLLWSNDYALPTVATFSLFFCIYFYKNSATNWLKDALVFSLILISTWLVLLLLIT CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGHPLELLKYNFRDVATDQWWYFSPYYDRIFHLSDLGKLINADLLILLVFSIYAYKTKYI CCCCHHHHHCCCHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESIILCIIGFALFFGGVLASIGGHFTKIYFNAYHAWAIIIAIIFTINLIVKLISKNIQSN HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QILFLRNLVSPSIIICLLMVASAGSYKYYRNLNSVQNNKYFYYIDEFGGYLNVKWKDYIE CEEEEHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEECCCCEEEEEHHHHHH FIKLNKHKPIIEEYWGLASALNRTFSPWPVDSVIHALGDVRKKAQDSLVKADYIITSKNG HHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCC NFSIWQPWSVSQNFWFYKTLFSEWEPIFHSPATTIWKKLPHKRTEQNVECEITKNRDAFT CEEEECCCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHCCCCCCCCCCEEEEECCCCEEE IKTDKTGLINVKLNYSITAKGRYLSMVKNNLSYASDAAGYVSINPKSDNAFFPVLSKGDE EEECCCEEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEECCCCC NEIYDAKIVGSDNGEIIIESCEASRFIIDLDDEDEIYPSVFK CCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA