| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944224
Identifier: 119944224
GI number: 119944224
Start: 568965
End: 569753
Strand: Reverse
Name: 119944224
Synonym: Ping_0447
Alternate gene names: NA
Gene position: 569753-568965 (Counterclockwise)
Preceding gene: 119944225
Following gene: 119944223
Centisome position: 12.5
GC content: 33.33
Gene sequence:
>789_bases ATGGTGAATAAACCTAAGTACTACGAAATCCCAAAGTATGAGCAATTATTTACATCTGAAAAGCAGCATGACTATTGTGT TGCTATCTTTGTCATAAATGAAGGCGAAAAGCTCCATAAGCAGTTACAACGTATGAAAAATTCAAACTTGAATGTAGATG TTATTATTTCTGATGGTGGCAGTACCGATGGTTCGACAGATAATCAAACCTTGAAAGACTTAGGCGTTAATACATTACTG GTCAAAAAAGAAAATGGAAAGCTAGGAAGTCAAATGCGCATTGCTTTTGCATGGGCAATTGAGAAAGGTTATCAAGGTAT TATTACTATTGACGGAAATAATAAAGACAGTGTAGAAAGTATTAATAATTTTGTTGGAAAACTTAAACTTGGTTATGATC ATATACAAGGCTCTCGATTTATACCGGGTGGTAAAGCTATCAATACGCCAAGATCACGCTTATTAGGCCTAAAACTATTA CATGTCCCAATGATGAGATTAGCTTCTGGGTTTAAGTACACAGATACAACTAATGGATTTAGGGCATACAGTAAAAAATT ACTCTTAGCGAATAGTATGGCTGTATTTAGAGATGTATTTACTAGCTACGAATTTCATTATTATTTGGCAATTGAAGCTG TAAAACAGGGATATAAATGTATAGAAATCCCTGTAACAAGAACATACCCGAAAGGGAAAGTACCTACAAAAATATCGCCT ATCAAAGGTAATTTAAATATAATTAAAACGCTAATATTTACTAGTATGGGCGGTTATAATGTTAAATAG
Upstream 100 bases:
>100_bases AAATTTACCCTTCAGTCTTTAAATAATAAGCACTCATTTCCAAAATAAATAATGTGTATTATCAATACAAAATTAAGCGA CAGAAAACAGGTGGAAATAT
Downstream 100 bases:
>100_bases AGCAAACCTAGAACATAAGACATTTCAATTAATGATAATACCTTGTTTGCTCCTCCTTTTTTCTTTTCTCTCTTATCAAG AAAATTTATTTAGAGTGATA
Product: dolichyl-phosphate beta-D-mannosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyltransferase; Apolipo; Glycosyl Transferase Group 2 Family Protein; Dolichol-Phosphate Mannosyltransferase; Apolipoprotein N-Acyltransferase; Polyprenol Phosphate Mannosyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Polyprenol-Phosphate-Mannose Synthase; Family 2 Glycosyl Transferase; Group 2 Family Glycosyltransferase; Group 2 Family Glycosyl Transferase; Prenol Monophospho-Mannose Synthase; Polyprenyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase Family Beta-Glycosyltransferase; Polyprenol-Monophosphomannose Synthase Ppm1B; Polyprenol-Monophosphomannose Synthase
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MVNKPKYYEIPKYEQLFTSEKQHDYCVAIFVINEGEKLHKQLQRMKNSNLNVDVIISDGGSTDGSTDNQTLKDLGVNTLL VKKENGKLGSQMRIAFAWAIEKGYQGIITIDGNNKDSVESINNFVGKLKLGYDHIQGSRFIPGGKAINTPRSRLLGLKLL HVPMMRLASGFKYTDTTNGFRAYSKKLLLANSMAVFRDVFTSYEFHYYLAIEAVKQGYKCIEIPVTRTYPKGKVPTKISP IKGNLNIIKTLIFTSMGGYNVK
Sequences:
>Translated_262_residues MVNKPKYYEIPKYEQLFTSEKQHDYCVAIFVINEGEKLHKQLQRMKNSNLNVDVIISDGGSTDGSTDNQTLKDLGVNTLL VKKENGKLGSQMRIAFAWAIEKGYQGIITIDGNNKDSVESINNFVGKLKLGYDHIQGSRFIPGGKAINTPRSRLLGLKLL HVPMMRLASGFKYTDTTNGFRAYSKKLLLANSMAVFRDVFTSYEFHYYLAIEAVKQGYKCIEIPVTRTYPKGKVPTKISP IKGNLNIIKTLIFTSMGGYNVK >Mature_262_residues MVNKPKYYEIPKYEQLFTSEKQHDYCVAIFVINEGEKLHKQLQRMKNSNLNVDVIISDGGSTDGSTDNQTLKDLGVNTLL VKKENGKLGSQMRIAFAWAIEKGYQGIITIDGNNKDSVESINNFVGKLKLGYDHIQGSRFIPGGKAINTPRSRLLGLKLL HVPMMRLASGFKYTDTTNGFRAYSKKLLLANSMAVFRDVFTSYEFHYYLAIEAVKQGYKCIEIPVTRTYPKGKVPTKISP IKGNLNIIKTLIFTSMGGYNVK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29464; Mature: 29464
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKPKYYEIPKYEQLFTSEKQHDYCVAIFVINEGEKLHKQLQRMKNSNLNVDVIISDGG CCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCC STDGSTDNQTLKDLGVNTLLVKKENGKLGSQMRIAFAWAIEKGYQGIITIDGNNKDSVES CCCCCCCCHHHHHCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCHHHHH INNFVGKLKLGYDHIQGSRFIPGGKAINTPRSRLLGLKLLHVPMMRLASGFKYTDTTNGF HHHHHHEEEECHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH RAYSKKLLLANSMAVFRDVFTSYEFHYYLAIEAVKQGYKCIEIPVTRTYPKGKVPTKISP HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCEEEEEEEECCCCCCCCCCEECC IKGNLNIIKTLIFTSMGGYNVK CCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVNKPKYYEIPKYEQLFTSEKQHDYCVAIFVINEGEKLHKQLQRMKNSNLNVDVIISDGG CCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCC STDGSTDNQTLKDLGVNTLLVKKENGKLGSQMRIAFAWAIEKGYQGIITIDGNNKDSVES CCCCCCCCHHHHHCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCHHHHH INNFVGKLKLGYDHIQGSRFIPGGKAINTPRSRLLGLKLLHVPMMRLASGFKYTDTTNGF HHHHHHEEEECHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH RAYSKKLLLANSMAVFRDVFTSYEFHYYLAIEAVKQGYKCIEIPVTRTYPKGKVPTKISP HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCEEEEEEEECCCCCCCCCCEECC IKGNLNIIKTLIFTSMGGYNVK CCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA