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The map label for this gene is arnC [H]

Identifier: 119944226

GI number: 119944226

Start: 571753

End: 572757

Strand: Reverse

Name: arnC [H]

Synonym: Ping_0449

Alternate gene names: 119944226

Gene position: 572757-571753 (Counterclockwise)

Preceding gene: 119944227

Following gene: 119944225

Centisome position: 12.56

GC content: 35.82

Gene sequence:

>1005_bases
ATGAAAAGTGAAATATTTGTATCTGTCGTTTTGATTGTAAAAAACCAGACAGATAAACTAATAAACTATTTAGATAAACT
TTCCCCCTATTTGAATGAGCAATATAATGACTATGAAGTTGTCATTATCGACGAAAAATCTACTGATGATATTGAACATA
AATTAAGAAAATCACTCGAGACTCATCAATCTATACGCCATATTCGCCTATCACAAGAAGTGAGCACTGATGTGGCGTTA
GCGGCTGGAATAGAGAATGCGATCGGTGATTTTGTTGTGAATCTGAATATCCTAACAGACCATCCTGAACTGGTGAATGC
TCTGCTAGAAAGCGGACTTGCCGGGAATGATGTTGTGGTTGGTGTTTCTCAAAAAATAAACTCTTTCATATATCGGCATT
TAAGAAAACTTTCGACATGGTTACTAAAGTCTATTGGTTATAGCCTACCAAGTAATTCAACGGGTACTTTTTGCTTTAGT
CGCCGGGCTGTAAATGCCATTACAGAATCAGGTCGATTTTACTGTAAGTTACATTTAAAAATAGCGAATACTGGTTATAC
ATTATCTCCTTTTCTTTGTGATGACTTCATCAGTAATACACATAAAAAAAGTCTCACTCACGGTATAAAAGAAACGCTCC
ATCACATGGTCTTTAATTCAACAAAACCGCTTCGCTGGATGAGTGCTCTTGGTATATTTGGCAGCCTTATGGCAATGTTA
TTCTCGTTCTATAGTCTGATCGTTCATTTTATTAATGATCAAGTTGCACCCGGTTGGACAACAACAATTTTATTCATGTC
CTTCTTGTTTGCGATGATGTTTACCATGCTTTCATTCTTTGGTGAATATTTAGCCAGATTGTTAAATGATCGAAGTGAAC
ATAAAGAATACAATATCGTTTATGAGCGAAATAGCTCTGTGATGTTAGATGAAGATCGCAGTAATGTGTTATTTACTTCT
TTGGGTGAAAGTGTAAACAACAGCCAAACAGGTAGAAATCGATGA

Upstream 100 bases:

>100_bases
CTAACTATGGCTTACCAGGCTTACACTGTGTAATGGGTGGAAAAATCGATAATATTTACGATGTCATACAAACCATTAAT
AATTTAGGGTTGGATGTATA

Downstream 100 bases:

>100_bases
AATTAAAAATAACTATAATATTACTTGGCTTTTATTGTATTTTTATCAATGCACTAACGGGGTCAATTCTTGTACCAACG
TTTCACTTGGATGGTGCTTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKSEIFVSVVLIVKNQTDKLINYLDKLSPYLNEQYNDYEVVIIDEKSTDDIEHKLRKSLETHQSIRHIRLSQEVSTDVAL
AAGIENAIGDFVVNLNILTDHPELVNALLESGLAGNDVVVGVSQKINSFIYRHLRKLSTWLLKSIGYSLPSNSTGTFCFS
RRAVNAITESGRFYCKLHLKIANTGYTLSPFLCDDFISNTHKKSLTHGIKETLHHMVFNSTKPLRWMSALGIFGSLMAML
FSFYSLIVHFINDQVAPGWTTTILFMSFLFAMMFTMLSFFGEYLARLLNDRSEHKEYNIVYERNSSVMLDEDRSNVLFTS
LGESVNNSQTGRNR

Sequences:

>Translated_334_residues
MKSEIFVSVVLIVKNQTDKLINYLDKLSPYLNEQYNDYEVVIIDEKSTDDIEHKLRKSLETHQSIRHIRLSQEVSTDVAL
AAGIENAIGDFVVNLNILTDHPELVNALLESGLAGNDVVVGVSQKINSFIYRHLRKLSTWLLKSIGYSLPSNSTGTFCFS
RRAVNAITESGRFYCKLHLKIANTGYTLSPFLCDDFISNTHKKSLTHGIKETLHHMVFNSTKPLRWMSALGIFGSLMAML
FSFYSLIVHFINDQVAPGWTTTILFMSFLFAMMFTMLSFFGEYLARLLNDRSEHKEYNIVYERNSSVMLDEDRSNVLFTS
LGESVNNSQTGRNR
>Mature_334_residues
MKSEIFVSVVLIVKNQTDKLINYLDKLSPYLNEQYNDYEVVIIDEKSTDDIEHKLRKSLETHQSIRHIRLSQEVSTDVAL
AAGIENAIGDFVVNLNILTDHPELVNALLESGLAGNDVVVGVSQKINSFIYRHLRKLSTWLLKSIGYSLPSNSTGTFCFS
RRAVNAITESGRFYCKLHLKIANTGYTLSPFLCDDFISNTHKKSLTHGIKETLHHMVFNSTKPLRWMSALGIFGSLMAML
FSFYSLIVHFINDQVAPGWTTTILFMSFLFAMMFTMLSFFGEYLARLLNDRSEHKEYNIVYERNSSVMLDEDRSNVLFTS
LGESVNNSQTGRNR

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=317, Percent_Identity=24.6056782334385, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 38025; Mature: 38025

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSEIFVSVVLIVKNQTDKLINYLDKLSPYLNEQYNDYEVVIIDEKSTDDIEHKLRKSLE
CCCHHEEEEEEEEECCHHHHHHHHHHHCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHH
THQSIRHIRLSQEVSTDVALAAGIENAIGDFVVNLNILTDHPELVNALLESGLAGNDVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHCCCCCCCEEE
GVSQKINSFIYRHLRKLSTWLLKSIGYSLPSNSTGTFCFSRRAVNAITESGRFYCKLHLK
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE
IANTGYTLSPFLCDDFISNTHKKSLTHGIKETLHHMVFNSTKPLRWMSALGIFGSLMAML
EECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
FSFYSLIVHFINDQVAPGWTTTILFMSFLFAMMFTMLSFFGEYLARLLNDRSEHKEYNIV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEE
YERNSSVMLDEDRSNVLFTSLGESVNNSQTGRNR
EECCCCEEEECCCCCEEHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKSEIFVSVVLIVKNQTDKLINYLDKLSPYLNEQYNDYEVVIIDEKSTDDIEHKLRKSLE
CCCHHEEEEEEEEECCHHHHHHHHHHHCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHH
THQSIRHIRLSQEVSTDVALAAGIENAIGDFVVNLNILTDHPELVNALLESGLAGNDVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHCCCCCCCEEE
GVSQKINSFIYRHLRKLSTWLLKSIGYSLPSNSTGTFCFSRRAVNAITESGRFYCKLHLK
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE
IANTGYTLSPFLCDDFISNTHKKSLTHGIKETLHHMVFNSTKPLRWMSALGIFGSLMAML
EECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
FSFYSLIVHFINDQVAPGWTTTILFMSFLFAMMFTMLSFFGEYLARLLNDRSEHKEYNIV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEE
YERNSSVMLDEDRSNVLFTSLGESVNNSQTGRNR
EECCCCEEEECCCCCEEHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA