| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944050
Identifier: 119944050
GI number: 119944050
Start: 345301
End: 347145
Strand: Direct
Name: 119944050
Synonym: Ping_0264
Alternate gene names: NA
Gene position: 345301-347145 (Clockwise)
Preceding gene: 119944049
Following gene: 119944051
Centisome position: 7.57
GC content: 39.35
Gene sequence:
>1845_bases ATGGATAATAGTGAATTACAGCCAATTGTTGATTTCATGGGTAAATTAGCCCCTTTTGATTCATTGCCTGAACATATCAT CAAGCAATGCTGCCAAATATTAACTATTGCCTATTACAGTAAACAACAGAAATTAGTATCAGTAGACAGTAATGCTCCAC AACTCTATATTGTTCGCAGTGGTGCTTTTGAAGTAACGACGGAAGATGGAGAACTAATTGATAGAGTGGGTGAAGGCCAA TACTTTGGATTTAGCGGTTTGCTATCGGGAGAAAAAGTTGTTAACCAAATACATATTTTAGAAGATGGTTTGGTTTATCA CCTGCCTGCTAAAATGTTCGACCAACTACGTGCCAACAGCCATTCGTTTGATCGTTTCTTTAATCAAGCCTTTGCCAAAC GTTTACGTAATCAAGGCACACTTCAACATGATAATATTAGCACTGCGCGTATTACTCATATAATGTCTAAAGATCTTACC ACGATCACAGCTGATGCGAGTATTCATCAAGCAGCACTTTTAATGTCTAAAAAGCGTCTTTCCTCTCTGGTGGTGGTCGA TCAAGAAAAACTGTGTGGTATCTTAACCGATCGTGATTTACGCAATCGCGTGTTAGCAAAAGGACTCAATGGCGATCTAT TAGTAGGACAAATAATGACGAAGGATCCCGTTATCATCGAACCTAATGCATTGATGTTTGAAGCCATGTTAAAAATGAGC GAAAATAATATCCATCATTTACCTGTGGTGCGTGAAGGCAGACCAATAGGGATCATTACCAGCACTGACTTGATCCGCAG TCAAAGCTCTCAACCATTGTTGTTAATTGGTCAAATAGAGCGCCAAAATAGTTTAGAAGCGCTTATTAAAGTTAGCCAAA AAATACCTGATCTACTACACAATTTAATCAGCAGCGATGCTAAAGCTATTGAAATTGGACGGATTCTTACCTCAGTCACC GACTCATTAACACGGCGTTTAATTACCTTAAAACAGAAACAATTAGGTCCGGCGCCAATGGGATTTTGTTGGTTAGCTTT TGGATCACAAGGCCGCCAGGATCAAATGGCAGGCTCTGATCAAGATAACGCATTGATCTTAGCAAGAGACACCACAGCGG CAGAAAAAGACTACTTTAAACAATTGTCAGAGTATGTATGCAGTGCTTTAAATGAGTGCGGCTTTCCATTTTGCCCGGGT AATATCATGGCTCAAAATCCGCAATGGCAATTAACATTACAGCAATGGCAACAACAGTTTTCAAGTTGGGTTAAAACGCC AAAACCGAGTGCATTATTAAACGCGACTATCTTTTTTGATATGCGTGGAGTATTTGGTGATTTAGCATTATTTAACACTC TGCAATTAAGCGTATTAAAAAATACCAAAAATAACGATATATTTATCGCTGCGCTTAGCCAGAACGCCCTGCAATCAACA CCACCAATCGGTTTTTTCCGCAGCTTTGTTATTGAACGCGATGGCAGTGAAGTAAAAGGAATAGACTTAAAACATAAAGG CAATGCATTAATCAATGATATTGTCAGGATCTATGCGCTAGCAGCAGGTATCAAGGAAGTAAATACGACTAAACGCCTTG AAAGTTTAATGGCCAAATCTAAGATAGATAAAGATATTGCAATGAGTTTGTTAGATTCCTGGGAGTTTATCGCCCATAAA CGGCTTATCAATCAGGGGCGGCAATTTAACAATACGGAGCCGGTCTCTAACTATATTTTACCCGACAGCCTCTCTTCATT GGTGCGTCATCAGCTAAAGGATGCCTTTAAAGTTATCCATGAAGCACAAGACACCGTTAGGCTAAAATTCTTAAGGCAAT TTTGA
Upstream 100 bases:
>100_bases AAAGCGCTTCGGCGCTTTTTTTTAATGCTTTTTTAGCCACATATCTATACTCGCAATACCCTCACCACCCTAAAAACCCT CAACCTATAGTCAGGTGCAT
Downstream 100 bases:
>100_bases TGTTTAAACAATGGTGGTTACAGTACAAATTAAAACGGCTGATTAAAAATAGCAAACTCGCCGCGCTAAAAGCACATTAT CAGTATCTGTTAACACAGCT
Product: signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MDNSELQPIVDFMGKLAPFDSLPEHIIKQCCQILTIAYYSKQQKLVSVDSNAPQLYIVRSGAFEVTTEDGELIDRVGEGQ YFGFSGLLSGEKVVNQIHILEDGLVYHLPAKMFDQLRANSHSFDRFFNQAFAKRLRNQGTLQHDNISTARITHIMSKDLT TITADASIHQAALLMSKKRLSSLVVVDQEKLCGILTDRDLRNRVLAKGLNGDLLVGQIMTKDPVIIEPNALMFEAMLKMS ENNIHHLPVVREGRPIGIITSTDLIRSQSSQPLLLIGQIERQNSLEALIKVSQKIPDLLHNLISSDAKAIEIGRILTSVT DSLTRRLITLKQKQLGPAPMGFCWLAFGSQGRQDQMAGSDQDNALILARDTTAAEKDYFKQLSEYVCSALNECGFPFCPG NIMAQNPQWQLTLQQWQQQFSSWVKTPKPSALLNATIFFDMRGVFGDLALFNTLQLSVLKNTKNNDIFIAALSQNALQST PPIGFFRSFVIERDGSEVKGIDLKHKGNALINDIVRIYALAAGIKEVNTTKRLESLMAKSKIDKDIAMSLLDSWEFIAHK RLINQGRQFNNTEPVSNYILPDSLSSLVRHQLKDAFKVIHEAQDTVRLKFLRQF
Sequences:
>Translated_614_residues MDNSELQPIVDFMGKLAPFDSLPEHIIKQCCQILTIAYYSKQQKLVSVDSNAPQLYIVRSGAFEVTTEDGELIDRVGEGQ YFGFSGLLSGEKVVNQIHILEDGLVYHLPAKMFDQLRANSHSFDRFFNQAFAKRLRNQGTLQHDNISTARITHIMSKDLT TITADASIHQAALLMSKKRLSSLVVVDQEKLCGILTDRDLRNRVLAKGLNGDLLVGQIMTKDPVIIEPNALMFEAMLKMS ENNIHHLPVVREGRPIGIITSTDLIRSQSSQPLLLIGQIERQNSLEALIKVSQKIPDLLHNLISSDAKAIEIGRILTSVT DSLTRRLITLKQKQLGPAPMGFCWLAFGSQGRQDQMAGSDQDNALILARDTTAAEKDYFKQLSEYVCSALNECGFPFCPG NIMAQNPQWQLTLQQWQQQFSSWVKTPKPSALLNATIFFDMRGVFGDLALFNTLQLSVLKNTKNNDIFIAALSQNALQST PPIGFFRSFVIERDGSEVKGIDLKHKGNALINDIVRIYALAAGIKEVNTTKRLESLMAKSKIDKDIAMSLLDSWEFIAHK RLINQGRQFNNTEPVSNYILPDSLSSLVRHQLKDAFKVIHEAQDTVRLKFLRQF >Mature_614_residues MDNSELQPIVDFMGKLAPFDSLPEHIIKQCCQILTIAYYSKQQKLVSVDSNAPQLYIVRSGAFEVTTEDGELIDRVGEGQ YFGFSGLLSGEKVVNQIHILEDGLVYHLPAKMFDQLRANSHSFDRFFNQAFAKRLRNQGTLQHDNISTARITHIMSKDLT TITADASIHQAALLMSKKRLSSLVVVDQEKLCGILTDRDLRNRVLAKGLNGDLLVGQIMTKDPVIIEPNALMFEAMLKMS ENNIHHLPVVREGRPIGIITSTDLIRSQSSQPLLLIGQIERQNSLEALIKVSQKIPDLLHNLISSDAKAIEIGRILTSVT DSLTRRLITLKQKQLGPAPMGFCWLAFGSQGRQDQMAGSDQDNALILARDTTAAEKDYFKQLSEYVCSALNECGFPFCPG NIMAQNPQWQLTLQQWQQQFSSWVKTPKPSALLNATIFFDMRGVFGDLALFNTLQLSVLKNTKNNDIFIAALSQNALQST PPIGFFRSFVIERDGSEVKGIDLKHKGNALINDIVRIYALAAGIKEVNTTKRLESLMAKSKIDKDIAMSLLDSWEFIAHK RLINQGRQFNNTEPVSNYILPDSLSSLVRHQLKDAFKVIHEAQDTVRLKFLRQF
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 68854; Mature: 68854
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNSELQPIVDFMGKLAPFDSLPEHIIKQCCQILTIAYYSKQQKLVSVDSNAPQLYIVRS CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEC GAFEVTTEDGELIDRVGEGQYFGFSGLLSGEKVVNQIHILEDGLVYHLPAKMFDQLRANS CCEEEECCCHHHHHHCCCCCEECHHHCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHCCC HSFDRFFNQAFAKRLRNQGTLQHDNISTARITHIMSKDLTTITADASIHQAALLMSKKRL CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHH SSLVVVDQEKLCGILTDRDLRNRVLAKGLNGDLLVGQIMTKDPVIIEPNALMFEAMLKMS HHEEEECHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCHHHHHHHHHHC ENNIHHLPVVREGRPIGIITSTDLIRSQSSQPLLLIGQIERQNSLEALIKVSQKIPDLLH CCCCEECCEEECCCCEEEEECHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH NLISSDAKAIEIGRILTSVTDSLTRRLITLKQKQLGPAPMGFCWLAFGSQGRQDQMAGSD HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCHHCCCCC QDNALILARDTTAAEKDYFKQLSEYVCSALNECGFPFCPGNIMAQNPQWQLTLQQWQQQF CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEHHHHHHHHH SSWVKTPKPSALLNATIFFDMRGVFGDLALFNTLQLSVLKNTKNNDIFIAALSQNALQST HHHHCCCCCCHHEEEEEEEEHHHHHHHHHHHHHHHHHHECCCCCCCEEEEEECCCHHCCC PPIGFFRSFVIERDGSEVKGIDLKHKGNALINDIVRIYALAAGIKEVNTTKRLESLMAKS CCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIDKDIAMSLLDSWEFIAHKRLINQGRQFNNTEPVSNYILPDSLSSLVRHQLKDAFKVIH HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH EAQDTVRLKFLRQF HHHHHHHHHHHHCC >Mature Secondary Structure MDNSELQPIVDFMGKLAPFDSLPEHIIKQCCQILTIAYYSKQQKLVSVDSNAPQLYIVRS CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEC GAFEVTTEDGELIDRVGEGQYFGFSGLLSGEKVVNQIHILEDGLVYHLPAKMFDQLRANS CCEEEECCCHHHHHHCCCCCEECHHHCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHCCC HSFDRFFNQAFAKRLRNQGTLQHDNISTARITHIMSKDLTTITADASIHQAALLMSKKRL CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHH SSLVVVDQEKLCGILTDRDLRNRVLAKGLNGDLLVGQIMTKDPVIIEPNALMFEAMLKMS HHEEEECHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCHHHHHHHHHHC ENNIHHLPVVREGRPIGIITSTDLIRSQSSQPLLLIGQIERQNSLEALIKVSQKIPDLLH CCCCEECCEEECCCCEEEEECHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH NLISSDAKAIEIGRILTSVTDSLTRRLITLKQKQLGPAPMGFCWLAFGSQGRQDQMAGSD HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCHHCCCCC QDNALILARDTTAAEKDYFKQLSEYVCSALNECGFPFCPGNIMAQNPQWQLTLQQWQQQF CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEHHHHHHHHH SSWVKTPKPSALLNATIFFDMRGVFGDLALFNTLQLSVLKNTKNNDIFIAALSQNALQST HHHHCCCCCCHHEEEEEEEEHHHHHHHHHHHHHHHHHHECCCCCCCEEEEEECCCHHCCC PPIGFFRSFVIERDGSEVKGIDLKHKGNALINDIVRIYALAAGIKEVNTTKRLESLMAKS CCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIDKDIAMSLLDSWEFIAHKRLINQGRQFNNTEPVSNYILPDSLSSLVRHQLKDAFKVIH HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH EAQDTVRLKFLRQF HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]