Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is yjcG [C]

Identifier: 119944049

GI number: 119944049

Start: 343463

End: 345181

Strand: Direct

Name: yjcG [C]

Synonym: Ping_0263

Alternate gene names: 119944049

Gene position: 343463-345181 (Clockwise)

Preceding gene: 119944048

Following gene: 119944050

Centisome position: 7.53

GC content: 42.06

Gene sequence:

>1719_bases
ATGGATGTTCAAACTTTAACTTATACAATTGTAGGCATGACGTTTGCCCTTTATATTGTTATTGCAATATGGAGCCGAGC
AGGCTCTACTAAAGAATTTTACGTAGCAGGCGGCGGTGTACACCCCATTGTCAACGGCATGGCGACAGCAGCAGACTGGA
TGTCTGCAGCATCATTCATCTCATTAGCAGGTATCGTTTCATTTGTTGGTTATGATGGTTCGGTATATATAATGGGCTGG
ACCGGTGGTTATGTATTACTTGCACTCCTAATGGCGCCTTACTTACGTAAATTTGGTAAATTTACTGTGCCTGACTTTGT
TGGTGATCGCTACTACTCTCAAACTGCGCGTACTGTCGCTGTTATATGTGCACTTGTGGTCAGTTTCACTTATATTGCAG
GCCAAATGCGTGGTACAGGTGTTGTATTTTCACGTTTCTTGGAAGTAGATATTGATACTGGTGTTTATATCGGTATGGCC
GTTGTTTTCTTCTACTCTGTATTAGGTGGTATGAAAGGCATCACTTATACGCAAGTTGCTCAATACTGTGTAATGATTTT
TGCATTCATGGTGCCAGCTATTTTCTTATCAATCATGATGACCGGCCATGTGTTCCCACAGATTGGTTTCGGTTCTGAAT
TACTTGATGCCGCTGGTAATAATTCAGGCGTATATCTGCTTGATAAATTAGATGGATTGTCTACCCAACTCGGTTTTGCC
GAATATACAGTCGGTACAAAAGATACGATTGATGTGTTCTTCATCTGTGGTGCATTAATGTTTGGTACTGCCGGTTTACC
GCATGTTATCGTACGTTTCTTTACCGTTCCACGGGTTAAAGATGCACGTACTTCTGCAGGTTGGACATTAGTATTTATTG
CCATTCTGTACACTACCATTCCTGCCTTAGCCGCTTTCTCTCGTGTAAATATGATTGAAACAATCAATGGCCCCGAAGGG
AAAGGTGTTTCTCATGCAGAAGCGCCAAGCTGGATCAATAGCTGGGAAAAAACCGGTTTGATCGCATGGGATGATAAAAA
CGGCGATGGTAAAATGTATTATGCTAAAGGCGAAGCTAATGAGATGAAGATCGATCGCGATATCATCGTATTAGCAACAC
CTGAAATAGCTAACTTACCAGCTTGGGTTATCGCATTGATCGCTGCCGGTGGTTTAGCTGCTGCACTGTCAACCTCTGCC
GGATTATTACTGGTTATCTCAACTTCTGTTTCACATGATTTACTGAAGAAAAATATGATGCCGGATATCTCCGATAAGAG
GGAGTTACTGTATGCACGAATGGCAGCTGGTGTAGGTGTCCTTATTGCAGGTTACTTTGGTGTTAACCCTCCAGGTTTTG
TAGCCGCAGTGGTTGCCATCGCGTTCGGGCTTGCCGCATCGTCTTTATTCCCTGCAATAACAATGGGTATCTTCTCTAAG
AAGATGAATAAAGAAGGCGCTATTTCAGGTATGGCTGCAGGTTTACTGTTTTCAATAGCTTATATTGTTTACTTTAAATT
TGTAAATCCAGCTGGGAACATTTCTGAGAACTGGTTATTTGGTATTTCACCAGAAGGTATCGGTTTAGTGGGTATGTGTC
TTAACTTTATTGTTGCTATCATTGTTTGTCGCATGACAGCACCAGTACCTCAAGATGTACAAGATATGGTTGAAGCCATT
CGTTTCCCTAAAGGATCAGGTGAAGCATCAGATCATTAA

Upstream 100 bases:

>100_bases
GCGCGATATATGTGTTTCTTTTCTTGATTTTTTATTATAGAGCAAAAGCAAACAAACTCGATGAAAAATACGGTGTTCAA
GAAGACTAAGGATTAGCATA

Downstream 100 bases:

>100_bases
TATAATGATGTAATTAAAAAAAGCGCTTCGGCGCTTTTTTTTAATGCTTTTTTAGCCACATATCTATACTCGCAATACCC
TCACCACCCTAAAAACCCTC

Product: Na+/solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MDVQTLTYTIVGMTFALYIVIAIWSRAGSTKEFYVAGGGVHPIVNGMATAADWMSAASFISLAGIVSFVGYDGSVYIMGW
TGGYVLLALLMAPYLRKFGKFTVPDFVGDRYYSQTARTVAVICALVVSFTYIAGQMRGTGVVFSRFLEVDIDTGVYIGMA
VVFFYSVLGGMKGITYTQVAQYCVMIFAFMVPAIFLSIMMTGHVFPQIGFGSELLDAAGNNSGVYLLDKLDGLSTQLGFA
EYTVGTKDTIDVFFICGALMFGTAGLPHVIVRFFTVPRVKDARTSAGWTLVFIAILYTTIPALAAFSRVNMIETINGPEG
KGVSHAEAPSWINSWEKTGLIAWDDKNGDGKMYYAKGEANEMKIDRDIIVLATPEIANLPAWVIALIAAGGLAAALSTSA
GLLLVISTSVSHDLLKKNMMPDISDKRELLYARMAAGVGVLIAGYFGVNPPGFVAAVVAIAFGLAASSLFPAITMGIFSK
KMNKEGAISGMAAGLLFSIAYIVYFKFVNPAGNISENWLFGISPEGIGLVGMCLNFIVAIIVCRMTAPVPQDVQDMVEAI
RFPKGSGEASDH

Sequences:

>Translated_572_residues
MDVQTLTYTIVGMTFALYIVIAIWSRAGSTKEFYVAGGGVHPIVNGMATAADWMSAASFISLAGIVSFVGYDGSVYIMGW
TGGYVLLALLMAPYLRKFGKFTVPDFVGDRYYSQTARTVAVICALVVSFTYIAGQMRGTGVVFSRFLEVDIDTGVYIGMA
VVFFYSVLGGMKGITYTQVAQYCVMIFAFMVPAIFLSIMMTGHVFPQIGFGSELLDAAGNNSGVYLLDKLDGLSTQLGFA
EYTVGTKDTIDVFFICGALMFGTAGLPHVIVRFFTVPRVKDARTSAGWTLVFIAILYTTIPALAAFSRVNMIETINGPEG
KGVSHAEAPSWINSWEKTGLIAWDDKNGDGKMYYAKGEANEMKIDRDIIVLATPEIANLPAWVIALIAAGGLAAALSTSA
GLLLVISTSVSHDLLKKNMMPDISDKRELLYARMAAGVGVLIAGYFGVNPPGFVAAVVAIAFGLAASSLFPAITMGIFSK
KMNKEGAISGMAAGLLFSIAYIVYFKFVNPAGNISENWLFGISPEGIGLVGMCLNFIVAIIVCRMTAPVPQDVQDMVEAI
RFPKGSGEASDH
>Mature_572_residues
MDVQTLTYTIVGMTFALYIVIAIWSRAGSTKEFYVAGGGVHPIVNGMATAADWMSAASFISLAGIVSFVGYDGSVYIMGW
TGGYVLLALLMAPYLRKFGKFTVPDFVGDRYYSQTARTVAVICALVVSFTYIAGQMRGTGVVFSRFLEVDIDTGVYIGMA
VVFFYSVLGGMKGITYTQVAQYCVMIFAFMVPAIFLSIMMTGHVFPQIGFGSELLDAAGNNSGVYLLDKLDGLSTQLGFA
EYTVGTKDTIDVFFICGALMFGTAGLPHVIVRFFTVPRVKDARTSAGWTLVFIAILYTTIPALAAFSRVNMIETINGPEG
KGVSHAEAPSWINSWEKTGLIAWDDKNGDGKMYYAKGEANEMKIDRDIIVLATPEIANLPAWVIALIAAGGLAAALSTSA
GLLLVISTSVSHDLLKKNMMPDISDKRELLYARMAAGVGVLIAGYFGVNPPGFVAAVVAIAFGLAASSLFPAITMGIFSK
KMNKEGAISGMAAGLLFSIAYIVYFKFVNPAGNISENWLFGISPEGIGLVGMCLNFIVAIIVCRMTAPVPQDVQDMVEAI
RFPKGSGEASDH

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI310128183, Length=570, Percent_Identity=23.3333333333333, Blast_Score=80, Evalue=6e-15,
Organism=Escherichia coli, GI1790503, Length=504, Percent_Identity=27.3809523809524, Blast_Score=142, Evalue=5e-35,
Organism=Escherichia coli, GI1787251, Length=491, Percent_Identity=24.2362525458248, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 61150; Mature: 61150

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVQTLTYTIVGMTFALYIVIAIWSRAGSTKEFYVAGGGVHPIVNGMATAADWMSAASFI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
SLAGIVSFVGYDGSVYIMGWTGGYVLLALLMAPYLRKFGKFTVPDFVGDRYYSQTARTVA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH
VICALVVSFTYIAGQMRGTGVVFSRFLEVDIDTGVYIGMAVVFFYSVLGGMKGITYTQVA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
QYCVMIFAFMVPAIFLSIMMTGHVFPQIGFGSELLDAAGNNSGVYLLDKLDGLSTQLGFA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCHHCCCH
EYTVGTKDTIDVFFICGALMFGTAGLPHVIVRFFTVPRVKDARTSAGWTLVFIAILYTTI
HEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
PALAAFSRVNMIETINGPEGKGVSHAEAPSWINSWEKTGLIAWDDKNGDGKMYYAKGEAN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCEEEECCCCC
EMKIDRDIIVLATPEIANLPAWVIALIAAGGLAAALSTSAGLLLVISTSVSHDLLKKNMM
CEEECCCEEEEECCCHHCCHHHHHHHHHHCHHHHHHHCCCCEEEEEECHHHHHHHHHCCC
PDISDKRELLYARMAAGVGVLIAGYFGVNPPGFVAAVVAIAFGLAASSLFPAITMGIFSK
CCCCHHHHHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMNKEGAISGMAAGLLFSIAYIVYFKFVNPAGNISENWLFGISPEGIGLVGMCLNFIVAI
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
IVCRMTAPVPQDVQDMVEAIRFPKGSGEASDH
HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDVQTLTYTIVGMTFALYIVIAIWSRAGSTKEFYVAGGGVHPIVNGMATAADWMSAASFI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
SLAGIVSFVGYDGSVYIMGWTGGYVLLALLMAPYLRKFGKFTVPDFVGDRYYSQTARTVA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH
VICALVVSFTYIAGQMRGTGVVFSRFLEVDIDTGVYIGMAVVFFYSVLGGMKGITYTQVA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
QYCVMIFAFMVPAIFLSIMMTGHVFPQIGFGSELLDAAGNNSGVYLLDKLDGLSTQLGFA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCHHCCCH
EYTVGTKDTIDVFFICGALMFGTAGLPHVIVRFFTVPRVKDARTSAGWTLVFIAILYTTI
HEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
PALAAFSRVNMIETINGPEGKGVSHAEAPSWINSWEKTGLIAWDDKNGDGKMYYAKGEAN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCEEEECCCCC
EMKIDRDIIVLATPEIANLPAWVIALIAAGGLAAALSTSAGLLLVISTSVSHDLLKKNMM
CEEECCCEEEEECCCHHCCHHHHHHHHHHCHHHHHHHCCCCEEEEEECHHHHHHHHHCCC
PDISDKRELLYARMAAGVGVLIAGYFGVNPPGFVAAVVAIAFGLAASSLFPAITMGIFSK
CCCCHHHHHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMNKEGAISGMAAGLLFSIAYIVYFKFVNPAGNISENWLFGISPEGIGLVGMCLNFIVAI
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
IVCRMTAPVPQDVQDMVEAIRFPKGSGEASDH
HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]