| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yjcG [C]
Identifier: 119944049
GI number: 119944049
Start: 343463
End: 345181
Strand: Direct
Name: yjcG [C]
Synonym: Ping_0263
Alternate gene names: 119944049
Gene position: 343463-345181 (Clockwise)
Preceding gene: 119944048
Following gene: 119944050
Centisome position: 7.53
GC content: 42.06
Gene sequence:
>1719_bases ATGGATGTTCAAACTTTAACTTATACAATTGTAGGCATGACGTTTGCCCTTTATATTGTTATTGCAATATGGAGCCGAGC AGGCTCTACTAAAGAATTTTACGTAGCAGGCGGCGGTGTACACCCCATTGTCAACGGCATGGCGACAGCAGCAGACTGGA TGTCTGCAGCATCATTCATCTCATTAGCAGGTATCGTTTCATTTGTTGGTTATGATGGTTCGGTATATATAATGGGCTGG ACCGGTGGTTATGTATTACTTGCACTCCTAATGGCGCCTTACTTACGTAAATTTGGTAAATTTACTGTGCCTGACTTTGT TGGTGATCGCTACTACTCTCAAACTGCGCGTACTGTCGCTGTTATATGTGCACTTGTGGTCAGTTTCACTTATATTGCAG GCCAAATGCGTGGTACAGGTGTTGTATTTTCACGTTTCTTGGAAGTAGATATTGATACTGGTGTTTATATCGGTATGGCC GTTGTTTTCTTCTACTCTGTATTAGGTGGTATGAAAGGCATCACTTATACGCAAGTTGCTCAATACTGTGTAATGATTTT TGCATTCATGGTGCCAGCTATTTTCTTATCAATCATGATGACCGGCCATGTGTTCCCACAGATTGGTTTCGGTTCTGAAT TACTTGATGCCGCTGGTAATAATTCAGGCGTATATCTGCTTGATAAATTAGATGGATTGTCTACCCAACTCGGTTTTGCC GAATATACAGTCGGTACAAAAGATACGATTGATGTGTTCTTCATCTGTGGTGCATTAATGTTTGGTACTGCCGGTTTACC GCATGTTATCGTACGTTTCTTTACCGTTCCACGGGTTAAAGATGCACGTACTTCTGCAGGTTGGACATTAGTATTTATTG CCATTCTGTACACTACCATTCCTGCCTTAGCCGCTTTCTCTCGTGTAAATATGATTGAAACAATCAATGGCCCCGAAGGG AAAGGTGTTTCTCATGCAGAAGCGCCAAGCTGGATCAATAGCTGGGAAAAAACCGGTTTGATCGCATGGGATGATAAAAA CGGCGATGGTAAAATGTATTATGCTAAAGGCGAAGCTAATGAGATGAAGATCGATCGCGATATCATCGTATTAGCAACAC CTGAAATAGCTAACTTACCAGCTTGGGTTATCGCATTGATCGCTGCCGGTGGTTTAGCTGCTGCACTGTCAACCTCTGCC GGATTATTACTGGTTATCTCAACTTCTGTTTCACATGATTTACTGAAGAAAAATATGATGCCGGATATCTCCGATAAGAG GGAGTTACTGTATGCACGAATGGCAGCTGGTGTAGGTGTCCTTATTGCAGGTTACTTTGGTGTTAACCCTCCAGGTTTTG TAGCCGCAGTGGTTGCCATCGCGTTCGGGCTTGCCGCATCGTCTTTATTCCCTGCAATAACAATGGGTATCTTCTCTAAG AAGATGAATAAAGAAGGCGCTATTTCAGGTATGGCTGCAGGTTTACTGTTTTCAATAGCTTATATTGTTTACTTTAAATT TGTAAATCCAGCTGGGAACATTTCTGAGAACTGGTTATTTGGTATTTCACCAGAAGGTATCGGTTTAGTGGGTATGTGTC TTAACTTTATTGTTGCTATCATTGTTTGTCGCATGACAGCACCAGTACCTCAAGATGTACAAGATATGGTTGAAGCCATT CGTTTCCCTAAAGGATCAGGTGAAGCATCAGATCATTAA
Upstream 100 bases:
>100_bases GCGCGATATATGTGTTTCTTTTCTTGATTTTTTATTATAGAGCAAAAGCAAACAAACTCGATGAAAAATACGGTGTTCAA GAAGACTAAGGATTAGCATA
Downstream 100 bases:
>100_bases TATAATGATGTAATTAAAAAAAGCGCTTCGGCGCTTTTTTTTAATGCTTTTTTAGCCACATATCTATACTCGCAATACCC TCACCACCCTAAAAACCCTC
Product: Na+/solute symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MDVQTLTYTIVGMTFALYIVIAIWSRAGSTKEFYVAGGGVHPIVNGMATAADWMSAASFISLAGIVSFVGYDGSVYIMGW TGGYVLLALLMAPYLRKFGKFTVPDFVGDRYYSQTARTVAVICALVVSFTYIAGQMRGTGVVFSRFLEVDIDTGVYIGMA VVFFYSVLGGMKGITYTQVAQYCVMIFAFMVPAIFLSIMMTGHVFPQIGFGSELLDAAGNNSGVYLLDKLDGLSTQLGFA EYTVGTKDTIDVFFICGALMFGTAGLPHVIVRFFTVPRVKDARTSAGWTLVFIAILYTTIPALAAFSRVNMIETINGPEG KGVSHAEAPSWINSWEKTGLIAWDDKNGDGKMYYAKGEANEMKIDRDIIVLATPEIANLPAWVIALIAAGGLAAALSTSA GLLLVISTSVSHDLLKKNMMPDISDKRELLYARMAAGVGVLIAGYFGVNPPGFVAAVVAIAFGLAASSLFPAITMGIFSK KMNKEGAISGMAAGLLFSIAYIVYFKFVNPAGNISENWLFGISPEGIGLVGMCLNFIVAIIVCRMTAPVPQDVQDMVEAI RFPKGSGEASDH
Sequences:
>Translated_572_residues MDVQTLTYTIVGMTFALYIVIAIWSRAGSTKEFYVAGGGVHPIVNGMATAADWMSAASFISLAGIVSFVGYDGSVYIMGW TGGYVLLALLMAPYLRKFGKFTVPDFVGDRYYSQTARTVAVICALVVSFTYIAGQMRGTGVVFSRFLEVDIDTGVYIGMA VVFFYSVLGGMKGITYTQVAQYCVMIFAFMVPAIFLSIMMTGHVFPQIGFGSELLDAAGNNSGVYLLDKLDGLSTQLGFA EYTVGTKDTIDVFFICGALMFGTAGLPHVIVRFFTVPRVKDARTSAGWTLVFIAILYTTIPALAAFSRVNMIETINGPEG KGVSHAEAPSWINSWEKTGLIAWDDKNGDGKMYYAKGEANEMKIDRDIIVLATPEIANLPAWVIALIAAGGLAAALSTSA GLLLVISTSVSHDLLKKNMMPDISDKRELLYARMAAGVGVLIAGYFGVNPPGFVAAVVAIAFGLAASSLFPAITMGIFSK KMNKEGAISGMAAGLLFSIAYIVYFKFVNPAGNISENWLFGISPEGIGLVGMCLNFIVAIIVCRMTAPVPQDVQDMVEAI RFPKGSGEASDH >Mature_572_residues MDVQTLTYTIVGMTFALYIVIAIWSRAGSTKEFYVAGGGVHPIVNGMATAADWMSAASFISLAGIVSFVGYDGSVYIMGW TGGYVLLALLMAPYLRKFGKFTVPDFVGDRYYSQTARTVAVICALVVSFTYIAGQMRGTGVVFSRFLEVDIDTGVYIGMA VVFFYSVLGGMKGITYTQVAQYCVMIFAFMVPAIFLSIMMTGHVFPQIGFGSELLDAAGNNSGVYLLDKLDGLSTQLGFA EYTVGTKDTIDVFFICGALMFGTAGLPHVIVRFFTVPRVKDARTSAGWTLVFIAILYTTIPALAAFSRVNMIETINGPEG KGVSHAEAPSWINSWEKTGLIAWDDKNGDGKMYYAKGEANEMKIDRDIIVLATPEIANLPAWVIALIAAGGLAAALSTSA GLLLVISTSVSHDLLKKNMMPDISDKRELLYARMAAGVGVLIAGYFGVNPPGFVAAVVAIAFGLAASSLFPAITMGIFSK KMNKEGAISGMAAGLLFSIAYIVYFKFVNPAGNISENWLFGISPEGIGLVGMCLNFIVAIIVCRMTAPVPQDVQDMVEAI RFPKGSGEASDH
Specific function: Unknown
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=570, Percent_Identity=23.3333333333333, Blast_Score=80, Evalue=6e-15, Organism=Escherichia coli, GI1790503, Length=504, Percent_Identity=27.3809523809524, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI1787251, Length=491, Percent_Identity=24.2362525458248, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR019899 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 61150; Mature: 61150
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVQTLTYTIVGMTFALYIVIAIWSRAGSTKEFYVAGGGVHPIVNGMATAADWMSAASFI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH SLAGIVSFVGYDGSVYIMGWTGGYVLLALLMAPYLRKFGKFTVPDFVGDRYYSQTARTVA HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH VICALVVSFTYIAGQMRGTGVVFSRFLEVDIDTGVYIGMAVVFFYSVLGGMKGITYTQVA HHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHH QYCVMIFAFMVPAIFLSIMMTGHVFPQIGFGSELLDAAGNNSGVYLLDKLDGLSTQLGFA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCHHCCCH EYTVGTKDTIDVFFICGALMFGTAGLPHVIVRFFTVPRVKDARTSAGWTLVFIAILYTTI HEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH PALAAFSRVNMIETINGPEGKGVSHAEAPSWINSWEKTGLIAWDDKNGDGKMYYAKGEAN HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCEEEECCCCC EMKIDRDIIVLATPEIANLPAWVIALIAAGGLAAALSTSAGLLLVISTSVSHDLLKKNMM CEEECCCEEEEECCCHHCCHHHHHHHHHHCHHHHHHHCCCCEEEEEECHHHHHHHHHCCC PDISDKRELLYARMAAGVGVLIAGYFGVNPPGFVAAVVAIAFGLAASSLFPAITMGIFSK CCCCHHHHHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMNKEGAISGMAAGLLFSIAYIVYFKFVNPAGNISENWLFGISPEGIGLVGMCLNFIVAI HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH IVCRMTAPVPQDVQDMVEAIRFPKGSGEASDH HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDVQTLTYTIVGMTFALYIVIAIWSRAGSTKEFYVAGGGVHPIVNGMATAADWMSAASFI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH SLAGIVSFVGYDGSVYIMGWTGGYVLLALLMAPYLRKFGKFTVPDFVGDRYYSQTARTVA HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH VICALVVSFTYIAGQMRGTGVVFSRFLEVDIDTGVYIGMAVVFFYSVLGGMKGITYTQVA HHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHH QYCVMIFAFMVPAIFLSIMMTGHVFPQIGFGSELLDAAGNNSGVYLLDKLDGLSTQLGFA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCHHCCCH EYTVGTKDTIDVFFICGALMFGTAGLPHVIVRFFTVPRVKDARTSAGWTLVFIAILYTTI HEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH PALAAFSRVNMIETINGPEGKGVSHAEAPSWINSWEKTGLIAWDDKNGDGKMYYAKGEAN HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCEEEECCCCC EMKIDRDIIVLATPEIANLPAWVIALIAAGGLAAALSTSAGLLLVISTSVSHDLLKKNMM CEEECCCEEEEECCCHHCCHHHHHHHHHHCHHHHHHHCCCCEEEEEECHHHHHHHHHCCC PDISDKRELLYARMAAGVGVLIAGYFGVNPPGFVAAVVAIAFGLAASSLFPAITMGIFSK CCCCHHHHHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMNKEGAISGMAAGLLFSIAYIVYFKFVNPAGNISENWLFGISPEGIGLVGMCLNFIVAI HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH IVCRMTAPVPQDVQDMVEAIRFPKGSGEASDH HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1356967 [H]