| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is mpb70 [H]
Identifier: 119870183
GI number: 119870183
Start: 4381277
End: 4382020
Strand: Direct
Name: mpb70 [H]
Synonym: Mkms_4153
Alternate gene names: 119870183
Gene position: 4381277-4382020 (Clockwise)
Preceding gene: 119870181
Following gene: 119870187
Centisome position: 76.37
GC content: 70.83
Gene sequence:
>744_bases GTGAAGACCCGTACCAGGACCCTGGGCGCAGCCGTGGGCATCGCCGCCATCGCCGTGTCGCTGCCCCTTTCGGTCACCGC CAACGCCGAGCCGGCGACGGTGGAAACCCCGCTGCCCAACCTCGAGGGCGACTGTGATCCCTTCCGCGCCGAGGTACCGA ACTGGAAGACCTTCGTCAACCAGCCGGTCAGCCAGGTGCTCGCCCAGATCCCGGACATCAGCACCTTCAGCTCCGCGGTC TCCGGTGGGCTCAACCCCGCCGTGAACGTCGCCTCGGTGCTCGACAACGGGCCGTACGTCGTGTTCGCCCCGACCGACGA GGCGTTCGCGAAGCTCCCGCCGGAGCAGCTCGAAGCGCTCAAGGCCAACCCGGCCGCGTTGACCGACCTGGACTACTACC ACGTGTTCCTCGGCCTGCTCGGCCCGGCCGACGTGAAGGGTCAGCGCGCCACCCAGCAGGGCGCCGACATCAAGGTCGTG GGCACCAACGGCGACATCAAGGTCAACGACACCGCCAAGGTGATCTGCGGCGGCATCGCGGCCCAGAACGCCCGCATCTA CCTGATCGACACCGTGCTCGACCCGGCGGCCGCGCCGGATGCGGTCAGCCCGTCCGGCACCTCGACGACGGCGACCACCT CGTCGACGGAGAGCACGCCGACGACGGAGCCCACCCCGCTGCCGGCCGAGCAGACCCCGGCCGCCGCGGCCGACATCCCC GCCGCGGACGCGCCGATCGGCTGA
Upstream 100 bases:
>100_bases CGTGACCAATTCGTGCCCTTACGATCCGAGACGGCGCCGCATAGGTAGCCGGCCCGACGCCGCCCATCGGCAGGCGTCCT GACGAGCTGAGGAGCCGATC
Downstream 100 bases:
>100_bases GCTACAGCCCAGCAGTCCCCCGCAAGCGGGAGGTGCCCCGTACAGAATCGCCCCTTTTCCGAGGAAAAGGGGCGATTCTG TGTCTGCTGGGCGGAGTCAG
Product: beta-Ig-H3/fasciclin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKTRTRTLGAAVGIAAIAVSLPLSVTANAEPATVETPLPNLEGDCDPFRAEVPNWKTFVNQPVSQVLAQIPDISTFSSAV SGGLNPAVNVASVLDNGPYVVFAPTDEAFAKLPPEQLEALKANPAALTDLDYYHVFLGLLGPADVKGQRATQQGADIKVV GTNGDIKVNDTAKVICGGIAAQNARIYLIDTVLDPAAAPDAVSPSGTSTTATTSSTESTPTTEPTPLPAEQTPAAAADIP AADAPIG
Sequences:
>Translated_247_residues MKTRTRTLGAAVGIAAIAVSLPLSVTANAEPATVETPLPNLEGDCDPFRAEVPNWKTFVNQPVSQVLAQIPDISTFSSAV SGGLNPAVNVASVLDNGPYVVFAPTDEAFAKLPPEQLEALKANPAALTDLDYYHVFLGLLGPADVKGQRATQQGADIKVV GTNGDIKVNDTAKVICGGIAAQNARIYLIDTVLDPAAAPDAVSPSGTSTTATTSSTESTPTTEPTPLPAEQTPAAAADIP AADAPIG >Mature_247_residues MKTRTRTLGAAVGIAAIAVSLPLSVTANAEPATVETPLPNLEGDCDPFRAEVPNWKTFVNQPVSQVLAQIPDISTFSSAV SGGLNPAVNVASVLDNGPYVVFAPTDEAFAKLPPEQLEALKANPAALTDLDYYHVFLGLLGPADVKGQRATQQGADIKVV GTNGDIKVNDTAKVICGGIAAQNARIYLIDTVLDPAAAPDAVSPSGTSTTATTSSTESTPTTEPTPLPAEQTPAAAADIP AADAPIG
Specific function: Unknown
COG id: COG2335
COG function: function code M; Secreted and surface protein containing fasciclin-like repeats
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAS1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000782 [H]
Pfam domain/function: PF02469 Fasciclin [H]
EC number: NA
Molecular weight: Translated: 25181; Mature: 25181
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS50213 FAS1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRTRTLGAAVGIAAIAVSLPLSVTANAEPATVETPLPNLEGDCDPFRAEVPNWKTFVN CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCCCCCCHHCCCCCHHHHHH QPVSQVLAQIPDISTFSSAVSGGLNPAVNVASVLDNGPYVVFAPTDEAFAKLPPEQLEAL HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHCCHHHHHHH KANPAALTDLDYYHVFLGLLGPADVKGQRATQQGADIKVVGTNGDIKVNDTAKVICGGIA CCCCCEECCCHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEECCCCEEECCCCEEEECCEE AQNARIYLIDTVLDPAAAPDAVSPSGTSTTATTSSTESTPTTEPTPLPAEQTPAAAADIP ECCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC AADAPIG CCCCCCC >Mature Secondary Structure MKTRTRTLGAAVGIAAIAVSLPLSVTANAEPATVETPLPNLEGDCDPFRAEVPNWKTFVN CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCCCCCCHHCCCCCHHHHHH QPVSQVLAQIPDISTFSSAVSGGLNPAVNVASVLDNGPYVVFAPTDEAFAKLPPEQLEAL HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHCCHHHHHHH KANPAALTDLDYYHVFLGLLGPADVKGQRATQQGADIKVVGTNGDIKVNDTAKVICGGIA CCCCCEECCCHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEECCCCEEECCCCEEEECCEE AQNARIYLIDTVLDPAAAPDAVSPSGTSTTATTSSTESTPTTEPTPLPAEQTPAAAADIP ECCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC AADAPIG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2663636; 1691265; 7551028; 12788972; 3278986 [H]