| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is dinG [H]
Identifier: 119869959
GI number: 119869959
Start: 4132580
End: 4134577
Strand: Direct
Name: dinG [H]
Synonym: Mkms_3929
Alternate gene names: 119869959
Gene position: 4132580-4134577 (Clockwise)
Preceding gene: 119869958
Following gene: 119869960
Centisome position: 72.03
GC content: 73.42
Gene sequence:
>1998_bases GTGGCCACGGGTAACGACGACGCCGGCGAACGCGTCACCGATCTGTTGGCCGCGGCCGTCGCTGCGGTGGGCGGTGCCGA GCGGCCCGGTCAGGTCGAGATGGCCAGGGCCGTGGCGACGGCGTTCGACACCGGCCGGCACCTCGCGGTGCAGGCCGGCA CCGGCACCGGCAAGTCGCTGGCCTATCTCGTGCCCGCGATCGCCCACGCGATCGCCGTCGACGAACCGGTCGTGGTGTCG ACCGCCACGATCGCCCTGCAGCGCCAGCTCGTCGACCGCGACCTGCCCCGCCTCGCCGACGCCCTGAGCGGGTCGCTGCC GCGCCGACCGCAGTTCGCGTTGCTCAAGGGCCGCGGAAACTACCTGTGTCTCAACAAGATTCACAACGGGAGCACCGGAA TCGGCGACGCCCCCGACGACCGGCCCCAGGAGGAGCTCTTCGACGCGGTCGCGGCCACCGCCCTGGGCCGAGACGTGCAG CGGCTGACCAAGTGGGCGTCGGACACCGAGACCGGTGACCGCGACGAACTGCGACCCGGCGTCCCCGAGCGGTCGTGGCG TCAGGTCAGCGTGTCGGCGCGGGAGTGCATCGGCGTCTCCCGATGCCCGTACGGCACCGACTGCTTCGCCGAGAAGGCCC GCGAGAAGGCGGCCGACGTGGACGTGGTGGTGACCAACCACGCGCTGCTGGCGATCGATGCGATCTCCGATGCCGCGGTG CTGCCCGAACACAGCGCGGTGGTGATCGACGAGGCGCACGAACTGGCCGACCGGGTGACGTCGGTGGCGACCGGTGAGCT CTCGGCGACCTCGCTGGGCATCGCCCACCGCCGGGTGGCGCGGCTGGTCGAGGGTGAGCTCGCGGATCGGCTGGAGGCCG CCGTCGCCACCGTGTCGTCGGCCATCCACGACGGCACGCCCGGACGCATCGACCGCCTCGACGACGAGCTGGCCACCTAC CTGACCGCGCTGCGCGACGCGGCCGACCGGGCCCGGTCGGCGATCGACACCGCACCGAGCGATCCGAAGGCCGCCGCCGC GCGCACCGAGGCGGTGACCGCGCTGAGCGATGTCAGCGACACCGCCAACCGGATCCTGGACTCCTTCGTTCCCGCCATCC CCGACCGCGTCGACGTCGTGTGGCTGGACCACGAGGGCGGCGGCGCCGGTTCGGTCAGCGCGATCCTGCGGGTGGCGCCG CTGTCGGTGGCCGGGCTGCTGCGCACCCGGCTGTTCGAGCACGCGACCACCGTGCTGACGTCGGCGACGCTGACCGTGGG CGGCAACTTCGAGGCGATGGCCCGGGCCTGGGGGCTGGCCGACACCAAGTGGCACGGACTCGACGTCGGCTCACCGTTCG ACCATGCCAAGGCCGGGATCCTCTACGTCGCCGCCCACCTCCCGCCGCCCGGCCGCGACGGCACCGGTTCGGCCGAACAG CTCAAGGAGATCGAGGCCCTGATCACCGCCGCGGGCGGACGCACGCTGGGCCTGTTCTCCTCCATGCGGGCGGCGAAGGC CGCCGCGGAGGTGATGCGCGACCGGCTCGACACCCCGGTGCTGTGCCAGGGTGAGGACACCACCTCGGCGCTGGTGGAGC GGTTCGCCGACGATCCGCAGACCTCGCTGTTCGGCACGCTGTCGCTGTGGCAGGGCGTCGACGTGCCGGGGCCGTCGCTG TCGCTGGTGCTCATCGACCGGATCCCGTTCCCGCGGCCCGACGATCCGTTGCTGACGGCCAGGCAGCGGGCGGTCACCGC ACACGGCGGCAACGGTTTCATGGCCGTCGCGGCCTCGCACGCCGCACTGCTGCTCGCCCAGGGGGCCGGCCGGTTGCTGC GGCGCACCGACGACCGCGGTGTGGTCGCGGTCCTGGACTCGCGCATGGCGACGGCCCGCTACAGCGGTTACCTGCGCGCC TCGCTGCCGCCGTTCTGGGCCACCACCGACCCGGCCCGGGTGCGCGCGGCGCTCGAACGCCTCCGCGCCGGGTCCTGA
Upstream 100 bases:
>100_bases TGCACAGCCTGCCGTGGGACGGGCTGAAACTGTCCCGCGGCGAACCGGCGATCCCGACCCGCATGATGGCCCCTGTCCGC GGCGCCGGACGACCCTAGGA
Downstream 100 bases:
>100_bases CGTCACTATCCTTCGAACGAAGTGACACGGAAAGGCGCCAGCATGAGCCGACGGCGGGTGTTCGGCGTCCAGGTCACCGC GGCGGCGGTGCTGGTGGTCG
Product: helicase c2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MATGNDDAGERVTDLLAAAVAAVGGAERPGQVEMARAVATAFDTGRHLAVQAGTGTGKSLAYLVPAIAHAIAVDEPVVVS TATIALQRQLVDRDLPRLADALSGSLPRRPQFALLKGRGNYLCLNKIHNGSTGIGDAPDDRPQEELFDAVAATALGRDVQ RLTKWASDTETGDRDELRPGVPERSWRQVSVSARECIGVSRCPYGTDCFAEKAREKAADVDVVVTNHALLAIDAISDAAV LPEHSAVVIDEAHELADRVTSVATGELSATSLGIAHRRVARLVEGELADRLEAAVATVSSAIHDGTPGRIDRLDDELATY LTALRDAADRARSAIDTAPSDPKAAAARTEAVTALSDVSDTANRILDSFVPAIPDRVDVVWLDHEGGGAGSVSAILRVAP LSVAGLLRTRLFEHATTVLTSATLTVGGNFEAMARAWGLADTKWHGLDVGSPFDHAKAGILYVAAHLPPPGRDGTGSAEQ LKEIEALITAAGGRTLGLFSSMRAAKAAAEVMRDRLDTPVLCQGEDTTSALVERFADDPQTSLFGTLSLWQGVDVPGPSL SLVLIDRIPFPRPDDPLLTARQRAVTAHGGNGFMAVAASHAALLLAQGAGRLLRRTDDRGVVAVLDSRMATARYSGYLRA SLPPFWATTDPARVRAALERLRAGS
Sequences:
>Translated_665_residues MATGNDDAGERVTDLLAAAVAAVGGAERPGQVEMARAVATAFDTGRHLAVQAGTGTGKSLAYLVPAIAHAIAVDEPVVVS TATIALQRQLVDRDLPRLADALSGSLPRRPQFALLKGRGNYLCLNKIHNGSTGIGDAPDDRPQEELFDAVAATALGRDVQ RLTKWASDTETGDRDELRPGVPERSWRQVSVSARECIGVSRCPYGTDCFAEKAREKAADVDVVVTNHALLAIDAISDAAV LPEHSAVVIDEAHELADRVTSVATGELSATSLGIAHRRVARLVEGELADRLEAAVATVSSAIHDGTPGRIDRLDDELATY LTALRDAADRARSAIDTAPSDPKAAAARTEAVTALSDVSDTANRILDSFVPAIPDRVDVVWLDHEGGGAGSVSAILRVAP LSVAGLLRTRLFEHATTVLTSATLTVGGNFEAMARAWGLADTKWHGLDVGSPFDHAKAGILYVAAHLPPPGRDGTGSAEQ LKEIEALITAAGGRTLGLFSSMRAAKAAAEVMRDRLDTPVLCQGEDTTSALVERFADDPQTSLFGTLSLWQGVDVPGPSL SLVLIDRIPFPRPDDPLLTARQRAVTAHGGNGFMAVAASHAALLLAQGAGRLLRRTDDRGVVAVLDSRMATARYSGYLRA SLPPFWATTDPARVRAALERLRAGS >Mature_664_residues ATGNDDAGERVTDLLAAAVAAVGGAERPGQVEMARAVATAFDTGRHLAVQAGTGTGKSLAYLVPAIAHAIAVDEPVVVST ATIALQRQLVDRDLPRLADALSGSLPRRPQFALLKGRGNYLCLNKIHNGSTGIGDAPDDRPQEELFDAVAATALGRDVQR LTKWASDTETGDRDELRPGVPERSWRQVSVSARECIGVSRCPYGTDCFAEKAREKAADVDVVVTNHALLAIDAISDAAVL PEHSAVVIDEAHELADRVTSVATGELSATSLGIAHRRVARLVEGELADRLEAAVATVSSAIHDGTPGRIDRLDDELATYL TALRDAADRARSAIDTAPSDPKAAAARTEAVTALSDVSDTANRILDSFVPAIPDRVDVVWLDHEGGGAGSVSAILRVAPL SVAGLLRTRLFEHATTVLTSATLTVGGNFEAMARAWGLADTKWHGLDVGSPFDHAKAGILYVAAHLPPPGRDGTGSAEQL KEIEALITAAGGRTLGLFSSMRAAKAAAEVMRDRLDTPVLCQGEDTTSALVERFADDPQTSLFGTLSLWQGVDVPGPSLS LVLIDRIPFPRPDDPLLTARQRAVTAHGGNGFMAVAASHAALLLAQGAGRLLRRTDDRGVVAVLDSRMATARYSGYLRAS LPPFWATTDPARVRAALERLRAGS
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase ATP-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=653, Percent_Identity=33.5375191424196, Blast_Score=272, Evalue=5e-74, Organism=Escherichia coli, GI1787018, Length=693, Percent_Identity=25.5411255411255, Blast_Score=140, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR014013 - InterPro: IPR006555 [H]
Pfam domain/function: PF00270 DEAD [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 69896; Mature: 69765
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00690 DEAH_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGNDDAGERVTDLLAAAVAAVGGAERPGQVEMARAVATAFDTGRHLAVQAGTGTGKSL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHH AYLVPAIAHAIAVDEPVVVSTATIALQRQLVDRDLPRLADALSGSLPRRPQFALLKGRGN HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC YLCLNKIHNGSTGIGDAPDDRPQEELFDAVAATALGRDVQRLTKWASDTETGDRDELRPG EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC VPERSWRQVSVSARECIGVSRCPYGTDCFAEKAREKAADVDVVVTNHALLAIDAISDAAV CCCCCHHEECCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCC LPEHSAVVIDEAHELADRVTSVATGELSATSLGIAHRRVARLVEGELADRLEAAVATVSS CCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIHDGTPGRIDRLDDELATYLTALRDAADRARSAIDTAPSDPKAAAARTEAVTALSDVSD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TANRILDSFVPAIPDRVDVVWLDHEGGGAGSVSAILRVAPLSVAGLLRTRLFEHATTVLT HHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SATLTVGGNFEAMARAWGLADTKWHGLDVGSPFDHAKAGILYVAAHLPPPGRDGTGSAEQ HEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCEEEEEEECCCCCCCCCCCHHH LKEIEALITAAGGRTLGLFSSMRAAKAAAEVMRDRLDTPVLCQGEDTTSALVERFADDPQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCC TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLTARQRAVTAHGGNGFMAVAASH HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHEEEEECCCCEEEEHHHH AALLLAQGAGRLLRRTDDRGVVAVLDSRMATARYSGYLRASLPPFWATTDPARVRAALER HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHH LRAGS HHCCC >Mature Secondary Structure ATGNDDAGERVTDLLAAAVAAVGGAERPGQVEMARAVATAFDTGRHLAVQAGTGTGKSL CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHH AYLVPAIAHAIAVDEPVVVSTATIALQRQLVDRDLPRLADALSGSLPRRPQFALLKGRGN HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC YLCLNKIHNGSTGIGDAPDDRPQEELFDAVAATALGRDVQRLTKWASDTETGDRDELRPG EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC VPERSWRQVSVSARECIGVSRCPYGTDCFAEKAREKAADVDVVVTNHALLAIDAISDAAV CCCCCHHEECCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCC LPEHSAVVIDEAHELADRVTSVATGELSATSLGIAHRRVARLVEGELADRLEAAVATVSS CCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIHDGTPGRIDRLDDELATYLTALRDAADRARSAIDTAPSDPKAAAARTEAVTALSDVSD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TANRILDSFVPAIPDRVDVVWLDHEGGGAGSVSAILRVAPLSVAGLLRTRLFEHATTVLT HHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SATLTVGGNFEAMARAWGLADTKWHGLDVGSPFDHAKAGILYVAAHLPPPGRDGTGSAEQ HEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCEEEEEEECCCCCCCCCCCHHH LKEIEALITAAGGRTLGLFSSMRAAKAAAEVMRDRLDTPVLCQGEDTTSALVERFADDPQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCC TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLTARQRAVTAHGGNGFMAVAASH HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHEEEEECCCCEEEEHHHH AALLLAQGAGRLLRRTDDRGVVAVLDSRMATARYSGYLRASLPPFWATTDPARVRAALER HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHH LRAGS HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]