| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868960
Identifier: 119868960
GI number: 119868960
Start: 3066224
End: 3066994
Strand: Direct
Name: 119868960
Synonym: Mkms_2928
Alternate gene names: NA
Gene position: 3066224-3066994 (Clockwise)
Preceding gene: 119868959
Following gene: 119868961
Centisome position: 53.44
GC content: 70.04
Gene sequence:
>771_bases GTGTCCGGGTATACGCGCTACGTGGCGATCGGCGACAGCCAGACCGAGGGGCTGTGGGACCGCGACGGCGACGGCGGGTT GATCGGTTTCGCCGACCGGCTGGCCGCGCATCTGGACACCCTTTATCCCGGTATCGCATACGCCAACCTCGCGGTGCGTG GCCGCCGGATCGCCCACGTGCTCGACGACCAGTTACCCCTGGCGCTTTCCATGCGGCCGGATCTGATCACGGTCTGTATC GGGATGAACGACGTGACGCGGCCCGGCCGGTCGTTCGGCGCGGCGCTGGCCGACCTCGATGCCCTCTACGCGAAGCTGGC CGCCTCCGGCGCGACGGTCGTCACCACGATGTTCCCCGACATCACCGCGATACTGCCGGTGGGCAGGCTGATCGCCGGCC GGGTGCGTCGGGTCAACGGCGTCATCGAGACGGCCGCGCAGCGGTACGGGTTCCGGCTCGTCGACCTGTACCACGCCGAG TCGATGCGTGAGCACGACACCTGGAGCGCCGACCGCGTGCACGGTTCGGCGAAAGGACACCGGTTGTTCGCCGCGGCCGC CGCCGAAGCCCTCGGCCTGCCGGGCAGCGACCACAGCTGGGCTTCGGCCGGCGCGTGCGCCGAGCAGCCGTCGTTCCGGA CCCGGGCGGCCTCGCAGGTGTCCTGGACACGCAATATGTTCGTCCCACACCTGTGGGGCAATCTGCGGGGCGTGTCCAGC GGTGACGGGCTCGCACCGCGGCGTCCGGTATTGGCCCCGGTAATACGATGA
Upstream 100 bases:
>100_bases GGCTACTACTTCTTCCCCGGCGTGCATGCCGAAGAGGACGTCGCCTACGAAATCGTCGCCGAGGTGCTGGCGAAACCGTT CCGCCGCTAGGCTTTTGGTC
Downstream 100 bases:
>100_bases GCGGATGCCCGACACACCGGACGACCCGGACGAGATGAAGCCGCACTTCGACGACGTGCAGGCCCACTACGACCTCTCCG ACGAGTTCTTCGCGCTTTTC
Product: GDSL family lipase
Products: NA
Alternate protein names: Lipolytic Protein G-D-S-L Family; GDSL Family Lipase; Lipase/Acylhydrolase; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; Lipolytic G-D-S-L; G-D-S-L Family Lipolytic Protein; Lysophospholipase L1-Like Esterase; GDSL-Like Lipase/Esterase; SGNH Hydrolase; SGNH Hydrolase Family Protein; Lipolytic Protein; Gdsl-Like Lipase; Lipase_GDSL Domain-Containing Protein; Lipase; GDSL-Like Lipase/Acylhydrolase; Secreted Protein
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSGYTRYVAIGDSQTEGLWDRDGDGGLIGFADRLAAHLDTLYPGIAYANLAVRGRRIAHVLDDQLPLALSMRPDLITVCI GMNDVTRPGRSFGAALADLDALYAKLAASGATVVTTMFPDITAILPVGRLIAGRVRRVNGVIETAAQRYGFRLVDLYHAE SMREHDTWSADRVHGSAKGHRLFAAAAAEALGLPGSDHSWASAGACAEQPSFRTRAASQVSWTRNMFVPHLWGNLRGVSS GDGLAPRRPVLAPVIR
Sequences:
>Translated_256_residues MSGYTRYVAIGDSQTEGLWDRDGDGGLIGFADRLAAHLDTLYPGIAYANLAVRGRRIAHVLDDQLPLALSMRPDLITVCI GMNDVTRPGRSFGAALADLDALYAKLAASGATVVTTMFPDITAILPVGRLIAGRVRRVNGVIETAAQRYGFRLVDLYHAE SMREHDTWSADRVHGSAKGHRLFAAAAAEALGLPGSDHSWASAGACAEQPSFRTRAASQVSWTRNMFVPHLWGNLRGVSS GDGLAPRRPVLAPVIR >Mature_255_residues SGYTRYVAIGDSQTEGLWDRDGDGGLIGFADRLAAHLDTLYPGIAYANLAVRGRRIAHVLDDQLPLALSMRPDLITVCIG MNDVTRPGRSFGAALADLDALYAKLAASGATVVTTMFPDITAILPVGRLIAGRVRRVNGVIETAAQRYGFRLVDLYHAES MREHDTWSADRVHGSAKGHRLFAAAAAEALGLPGSDHSWASAGACAEQPSFRTRAASQVSWTRNMFVPHLWGNLRGVSSG DGLAPRRPVLAPVIR
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27460; Mature: 27328
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYTRYVAIGDSQTEGLWDRDGDGGLIGFADRLAAHLDTLYPGIAYANLAVRGRRIAHV CCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH LDDQLPLALSMRPDLITVCIGMNDVTRPGRSFGAALADLDALYAKLAASGATVVTTMFPD HCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC ITAILPVGRLIAGRVRRVNGVIETAAQRYGFRLVDLYHAESMREHDTWSADRVHGSAKGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCHHHCCCCCCCC RLFAAAAAEALGLPGSDHSWASAGACAEQPSFRTRAASQVSWTRNMFVPHLWGNLRGVSS EEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCC GDGLAPRRPVLAPVIR CCCCCCCCCCCCCCCC >Mature Secondary Structure SGYTRYVAIGDSQTEGLWDRDGDGGLIGFADRLAAHLDTLYPGIAYANLAVRGRRIAHV CCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH LDDQLPLALSMRPDLITVCIGMNDVTRPGRSFGAALADLDALYAKLAASGATVVTTMFPD HCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC ITAILPVGRLIAGRVRRVNGVIETAAQRYGFRLVDLYHAESMREHDTWSADRVHGSAKGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCHHHCCCCCCCC RLFAAAAAEALGLPGSDHSWASAGACAEQPSFRTRAASQVSWTRNMFVPHLWGNLRGVSS EEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCC GDGLAPRRPVLAPVIR CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA