| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867865
Identifier: 119867865
GI number: 119867865
Start: 1937595
End: 1938740
Strand: Reverse
Name: 119867865
Synonym: Mkms_1826
Alternate gene names: NA
Gene position: 1938740-1937595 (Counterclockwise)
Preceding gene: 119867866
Following gene: 119867856
Centisome position: 33.79
GC content: 67.28
Gene sequence:
>1146_bases ATGAACGATGTCGCGATCATCGGTGTGGGGCTGCATCCGTTCGGCCGGTTCGAGGGTAAGTCGGCGATGCAGATGGGCGT CGACGCGATCTTCGCCGCGGTCGACGACGCCGGCGTCGCGTGGTCGGATGTGCAGTTCGCCACCGGCGGCAGTTGGACGG TGGCCAACCCCGACGCCATCGTCGGCATGGTCGGGCTCTCGGGTATTCCGTTCACCAATGTCTTCAACGCCTGCGCCACC GCAGCGAGTGCGCTGAAGGCCTGCGCCGACGGAATCCGATTGGGCGACTACGACATCGGCATCGCGATCGGCCTGGACAA GCATCCGCGCGGCGCCTTCACCGAGGATCCCGCACTGGTGGGCATGCCGTCCTGGTACGCGGAGAACGGCCAGTACCTGA CCACGCAGTTCTTCGGTATGAAGGCCAATCGCTATCTGCACGATCACCAGATCTCCCACGCCACGCTCGCCAAGGTGGCC GCCAAGAACTTCCGCAACGGGGCGCTCAACCCGAATGCGTTCCGGCGCAAGCCGATGACCGAGGAGCAGATCCTCGACTC GACGATGCTGAACTATCCGCTCACGCAGTACATGTTCTGCGCGCCCGACGAAGGGGCCGCCGCGGTGGTGATGTGCCGCG CCGACCTGGCCCACCGCTACACCTCGAAACCGGTGTACCTGCGCGCGGTGGAGGTCCGCACCCGGCAGTACGGCGCGTAC GAGGTCAATACCACGTTCGCGCCCGTCGACGAGGACGTCGCGCCGACGGTGTACGCGGCCAGGTCGGCGTTCGAGAAGGC CGGCATCGCGCCGACCGACGTCGACGTCGTCCAGTTGCAGGACACCGACGCCGGCGCGGAGATCATCCACATGGCCGAAT GCGGATTCTGCGCCGACGGCGATCAGGAGAAGCTGCTGGCCGACGGCGCCACCGAGATCGGCGGCCCACTGCCGATCAAC ACCGACGGTGGCCTGATCGCCAACGGCGAGCCGATCGGCGCATCGGGCCTGCGCCAGATCCACGAGCTGGTCCGGCAATT GCGGGGCGAGGCCGGAGACCGACAGGTACCCGGTGAGCCACGGGTCGGGTTCGGGCAGCTCTACGGTGCGCCCGGTACCG CCGCGGCCATGATCGTGTCCACCTGA
Upstream 100 bases:
>100_bases ATCGAGGCGCTCAAGGACTCGGGCGCCATCGCCTGATCCCCGCAGCCCGCGAGCCACAGACACTTACCGTAAGCGTTACA GTTGAGATATCATCACCGGC
Downstream 100 bases:
>100_bases CCACCGCGAGCAGACAGAGAATCGCCCCGAAACACCTGCGTTTAGGCGATTCTGCGTCTGCTCGCCGAATTTTCCCGGCG CTCACCGACTTCATCCCCAA
Product: thiolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNDVAIIGVGLHPFGRFEGKSAMQMGVDAIFAAVDDAGVAWSDVQFATGGSWTVANPDAIVGMVGLSGIPFTNVFNACAT AASALKACADGIRLGDYDIGIAIGLDKHPRGAFTEDPALVGMPSWYAENGQYLTTQFFGMKANRYLHDHQISHATLAKVA AKNFRNGALNPNAFRRKPMTEEQILDSTMLNYPLTQYMFCAPDEGAAAVVMCRADLAHRYTSKPVYLRAVEVRTRQYGAY EVNTTFAPVDEDVAPTVYAARSAFEKAGIAPTDVDVVQLQDTDAGAEIIHMAECGFCADGDQEKLLADGATEIGGPLPIN TDGGLIANGEPIGASGLRQIHELVRQLRGEAGDRQVPGEPRVGFGQLYGAPGTAAAMIVST
Sequences:
>Translated_381_residues MNDVAIIGVGLHPFGRFEGKSAMQMGVDAIFAAVDDAGVAWSDVQFATGGSWTVANPDAIVGMVGLSGIPFTNVFNACAT AASALKACADGIRLGDYDIGIAIGLDKHPRGAFTEDPALVGMPSWYAENGQYLTTQFFGMKANRYLHDHQISHATLAKVA AKNFRNGALNPNAFRRKPMTEEQILDSTMLNYPLTQYMFCAPDEGAAAVVMCRADLAHRYTSKPVYLRAVEVRTRQYGAY EVNTTFAPVDEDVAPTVYAARSAFEKAGIAPTDVDVVQLQDTDAGAEIIHMAECGFCADGDQEKLLADGATEIGGPLPIN TDGGLIANGEPIGASGLRQIHELVRQLRGEAGDRQVPGEPRVGFGQLYGAPGTAAAMIVST >Mature_381_residues MNDVAIIGVGLHPFGRFEGKSAMQMGVDAIFAAVDDAGVAWSDVQFATGGSWTVANPDAIVGMVGLSGIPFTNVFNACAT AASALKACADGIRLGDYDIGIAIGLDKHPRGAFTEDPALVGMPSWYAENGQYLTTQFFGMKANRYLHDHQISHATLAKVA AKNFRNGALNPNAFRRKPMTEEQILDSTMLNYPLTQYMFCAPDEGAAAVVMCRADLAHRYTSKPVYLRAVEVRTRQYGAY EVNTTFAPVDEDVAPTVYAARSAFEKAGIAPTDVDVVQLQDTDAGAEIIHMAECGFCADGDQEKLLADGATEIGGPLPIN TDGGLIANGEPIGASGLRQIHELVRQLRGEAGDRQVPGEPRVGFGQLYGAPGTAAAMIVST
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=375, Percent_Identity=29.6, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI302344760, Length=311, Percent_Identity=31.1897106109325, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI302344767, Length=304, Percent_Identity=30.9210526315789, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI302344762, Length=301, Percent_Identity=28.9036544850498, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI55956775, Length=279, Percent_Identity=25.4480286738351, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17537653, Length=376, Percent_Identity=29.2553191489362, Blast_Score=142, Evalue=2e-34, Organism=Drosophila melanogaster, GI24585051, Length=378, Percent_Identity=29.1005291005291, Blast_Score=144, Evalue=9e-35, Organism=Drosophila melanogaster, GI19921506, Length=374, Percent_Identity=28.6096256684492, Blast_Score=142, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 40395; Mature: 40395
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVAIIGVGLHPFGRFEGKSAMQMGVDAIFAAVDDAGVAWSDVQFATGGSWTVANPDAI CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCEEEECCCCEEECCCCCE VGMVGLSGIPFTNVFNACATAASALKACADGIRLGDYDIGIAIGLDKHPRGAFTEDPALV EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEEECCCCCCCCCCCCCCEE GMPSWYAENGQYLTTQFFGMKANRYLHDHQISHATLAKVAAKNFRNGALNPNAFRRKPMT CCCCHHCCCCCEEEEEEECCCCCCEEHHHCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCC EEQILDSTMLNYPLTQYMFCAPDEGAAAVVMCRADLAHRYTSKPVYLRAVEVRTRQYGAY HHHHHHHHHHCCCHHHEEEECCCCCCEEEEEEEHHHHHHHCCCCEEEEEEEEHHHCCCCE EVNTTFAPVDEDVAPTVYAARSAFEKAGIAPTDVDVVQLQDTDAGAEIIHMAECGFCADG EECCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCC DQEKLLADGATEIGGPLPINTDGGLIANGEPIGASGLRQIHELVRQLRGEAGDRQVPGEP CHHHHHHCCCHHCCCCCEECCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC RVGFGQLYGAPGTAAAMIVST CCCHHHEECCCCCEEEEEEEC >Mature Secondary Structure MNDVAIIGVGLHPFGRFEGKSAMQMGVDAIFAAVDDAGVAWSDVQFATGGSWTVANPDAI CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCEEEECCCCEEECCCCCE VGMVGLSGIPFTNVFNACATAASALKACADGIRLGDYDIGIAIGLDKHPRGAFTEDPALV EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEEECCCCCCCCCCCCCCEE GMPSWYAENGQYLTTQFFGMKANRYLHDHQISHATLAKVAAKNFRNGALNPNAFRRKPMT CCCCHHCCCCCEEEEEEECCCCCCEEHHHCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCC EEQILDSTMLNYPLTQYMFCAPDEGAAAVVMCRADLAHRYTSKPVYLRAVEVRTRQYGAY HHHHHHHHHHCCCHHHEEEECCCCCCEEEEEEEHHHHHHHCCCCEEEEEEEEHHHCCCCE EVNTTFAPVDEDVAPTVYAARSAFEKAGIAPTDVDVVQLQDTDAGAEIIHMAECGFCADG EECCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCC DQEKLLADGATEIGGPLPINTDGGLIANGEPIGASGLRQIHELVRQLRGEAGDRQVPGEP CHHHHHHCCCHHCCCCCEECCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC RVGFGQLYGAPGTAAAMIVST CCCHHHEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]