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The map label for this gene is 119867856

Identifier: 119867856

GI number: 119867856

Start: 1927969

End: 1928721

Strand: Reverse

Name: 119867856

Synonym: Mkms_1817

Alternate gene names: NA

Gene position: 1928721-1927969 (Counterclockwise)

Preceding gene: 119867865

Following gene: 119867852

Centisome position: 33.62

GC content: 65.6

Gene sequence:

>753_bases
GTGGCCAGACAAGCGACAGCTGAGAAGCGGCAGCGCCGCGAACGCGGGTCCATCAACCCCGAGGACATCATCAAGGGCGC
CTTCGAACTCGCCGAGGAGGTGTCGGTCGACAACCTCAGCATGCCGTTGTTGGGCAAGCATCTGGGAGTCGGCGTCACGA
GCATCTACTGGTACTTCCGCAAGAAGGACGACCTGCTCAACGCGATGGCCGACCGGGCGCTGCGTCAGATCGCCTTCGAA
GCGCCCTACGTCGACGCGGCGAACTGGCGCGAATCGCTGCACAACCACGCACACAACATGCGCAAGACCTTCCTCGCGAG
CCCGATCCTGTGTGACCTCGTGCTGATCCGCGGCGCGCTGTCGACCAAGGCGCTGCGACTCGGTCTCGAGCAGATCGAGG
CCGCGGTGTCCGGGCTGGTGGGTGCCGGCCTGTCACCGGAGGATGCGTTCGACACCTACTCGGCGGTGTCGGTCCACGTC
CGCGGTTCGGTGGTGCTCGCCCGTCTGTACGAGAAGACCCGGTCGTTGGAGAGTTCGGAGTTCCGGCTCGACGACTCGGC
GACGATCGATCCCGAATCCACCCCGCTGATGGCCGAACTCAGCGCCAAGGGCCATCACGTCGGCGTCCCCAACGACATGA
ACTTCGAGTACGGGCTCAACTGCATCCTCGACCACGCCGCCCGGCTCATCGAGCAGCAGGACACGACTGCGAAACCGGCG
GCCGCGCGACGGAAGAACGCCTCGTCGCGCTAG

Upstream 100 bases:

>100_bases
GCACCCACGGGGCCGTGGCGCGGCGGTGTCGCCATGGATCAGACCGCCTCGGCCGATCATTCCCCATGCGCATCATCGAT
CTTCGACGGAGGTACTCGCG

Downstream 100 bases:

>100_bases
CCTGCCGGACCGTCAGACCTCGATGACGACCGCGCCGCCCTGCCCACCGCCGGCGCACATCGCCGCGACGCCGATTCCAC
CGCCGCGCCGCTGCAGTTCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MARQATAEKRQRRERGSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMADRALRQIAFE
APYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGALSTKALRLGLEQIEAAVSGLVGAGLSPEDAFDTYSAVSVHV
RGSVVLARLYEKTRSLESSEFRLDDSATIDPESTPLMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQQDTTAKPA
AARRKNASSR

Sequences:

>Translated_250_residues
MARQATAEKRQRRERGSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMADRALRQIAFE
APYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGALSTKALRLGLEQIEAAVSGLVGAGLSPEDAFDTYSAVSVHV
RGSVVLARLYEKTRSLESSEFRLDDSATIDPESTPLMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQQDTTAKPA
AARRKNASSR
>Mature_249_residues
ARQATAEKRQRRERGSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMADRALRQIAFEA
PYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGALSTKALRLGLEQIEAAVSGLVGAGLSPEDAFDTYSAVSVHVR
GSVVLARLYEKTRSLESSEFRLDDSATIDPESTPLMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQQDTTAKPAA
ARRKNASSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR004111
- InterPro:   IPR001647 [H]

Pfam domain/function: PF02909 TetR_C; PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 27585; Mature: 27453

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQATAEKRQRRERGSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFR
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHH
KKDDLLNAMADRALRQIAFEAPYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGAL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STKALRLGLEQIEAAVSGLVGAGLSPEDAFDTYSAVSVHVRGSVVLARLYEKTRSLESSE
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEECHHHHHHHHHHHHHCCCCCC
FRLDDSATIDPESTPLMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQQDTTAKPA
EECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
AARRKNASSR
HHHHCCCCCC
>Mature Secondary Structure 
ARQATAEKRQRRERGSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFR
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHH
KKDDLLNAMADRALRQIAFEAPYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGAL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STKALRLGLEQIEAAVSGLVGAGLSPEDAFDTYSAVSVHVRGSVVLARLYEKTRSLESSE
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEECHHHHHHHHHHHHHCCCCCC
FRLDDSATIDPESTPLMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQQDTTAKPA
EECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
AARRKNASSR
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]