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The map label for this gene is scoB [H]

Identifier: 119867437

GI number: 119867437

Start: 1487993

End: 1488682

Strand: Direct

Name: scoB [H]

Synonym: Mkms_1387

Alternate gene names: 119867437

Gene position: 1487993-1488682 (Clockwise)

Preceding gene: 119867436

Following gene: 119867442

Centisome position: 25.94

GC content: 68.84

Gene sequence:

>690_bases
ATGAGCTGGACCCGGGATGAGATGGCCGCGCGCGCCGCGGCCGAACTACGCGACGGCGACTACGTCAATCTCGGAATCGG
TTTGCCCACTTTGATTCCCGATCACCTGCCCGACGGTTCGCAGGTCACGCTGCACGCCGAGAACGGCATCCTCGGTGTCG
GCCCGTTCCCGTACGAGGACCAGGTCGACCCCGATCTGATCAACGCGGGCAAGCAGACGGTGTCGGTCGTGTCCGGGGCG
TCCTACTTCGATTCGGCGACCAGTTTCGCGATGATCCGCGGCGGCCACGTCGACGTCGCAGTCCTGGGCGGCATGCAGGT
GTCGATGGCCGGTGACCTCGCGAACTGGATGGTCCCCGGCGCGATGGTCAAGGGCATCGGCGGCGCGATGGACCTGGTCA
ACGGGGCGGGCCGGGTCGTGGTCCTGATGGAACACGTGACCCGGGGCGGTGCCGCGCGCCTGGTCACCACCTGCGATCTC
CCGCTCACCGGCCGCCAGGTGGTGAGCCGGGTGATCACCAATCTGGGGGTGCTCGACGTGACCGGTGCCGGATTCGAGCT
CGTCGAGACGGCGCCGGGGGTCACCTTCGACGACGTGGTCGCCGCGACCGCCGCGCCGGTCACCGACGGGCGGGTTCAAC
TGCGCAGCGCGGCGAGTTCCGTACGTGAGCGCACTCCGAGCTTGGCGTAG

Upstream 100 bases:

>100_bases
TCCAGCGCATCGTGGCGCTCACCCCGATCCAGGCGCTGCGCAAGGACATCGAGAAGCGCACCACCCGGCCCCGTCCGGAC
GCGACACAGGAGGCGACGCG

Downstream 100 bases:

>100_bases
ATCCGGGTCAGGTGATACTGCACGGTCTTCGGCGAGACGTACAGTTCGGCAGCCACCTCACGATTCGAAAGACCCTGTGC
AACAAGGGTTGTGACTGCAT

Product: butyryl-CoA:acetate CoA transferase

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSWTRDEMAARAAAELRDGDYVNLGIGLPTLIPDHLPDGSQVTLHAENGILGVGPFPYEDQVDPDLINAGKQTVSVVSGA
SYFDSATSFAMIRGGHVDVAVLGGMQVSMAGDLANWMVPGAMVKGIGGAMDLVNGAGRVVVLMEHVTRGGAARLVTTCDL
PLTGRQVVSRVITNLGVLDVTGAGFELVETAPGVTFDDVVAATAAPVTDGRVQLRSAASSVRERTPSLA

Sequences:

>Translated_229_residues
MSWTRDEMAARAAAELRDGDYVNLGIGLPTLIPDHLPDGSQVTLHAENGILGVGPFPYEDQVDPDLINAGKQTVSVVSGA
SYFDSATSFAMIRGGHVDVAVLGGMQVSMAGDLANWMVPGAMVKGIGGAMDLVNGAGRVVVLMEHVTRGGAARLVTTCDL
PLTGRQVVSRVITNLGVLDVTGAGFELVETAPGVTFDDVVAATAAPVTDGRVQLRSAASSVRERTPSLA
>Mature_228_residues
SWTRDEMAARAAAELRDGDYVNLGIGLPTLIPDHLPDGSQVTLHAENGILGVGPFPYEDQVDPDLINAGKQTVSVVSGAS
YFDSATSFAMIRGGHVDVAVLGGMQVSMAGDLANWMVPGAMVKGIGGAMDLVNGAGRVVVLMEHVTRGGAARLVTTCDLP
LTGRQVVSRVITNLGVLDVTGAGFELVETAPGVTFDDVVAATAAPVTDGRVQLRSAASSVRERTPSLA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=201, Percent_Identity=54.228855721393, Blast_Score=223, Evalue=1e-58,
Organism=Homo sapiens, GI11545841, Length=203, Percent_Identity=52.2167487684729, Blast_Score=211, Evalue=5e-55,
Organism=Escherichia coli, GI1788552, Length=201, Percent_Identity=49.2537313432836, Blast_Score=200, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI17531517, Length=204, Percent_Identity=53.4313725490196, Blast_Score=227, Evalue=3e-60,
Organism=Drosophila melanogaster, GI21358325, Length=206, Percent_Identity=55.8252427184466, Blast_Score=240, Evalue=6e-64,
Organism=Drosophila melanogaster, GI24655794, Length=206, Percent_Identity=55.8252427184466, Blast_Score=239, Evalue=1e-63,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 23641; Mature: 23510

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWTRDEMAARAAAELRDGDYVNLGIGLPTLIPDHLPDGSQVTLHAENGILGVGPFPYED
CCCCHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCCCEEEEEECCCEEECCCCCCCC
QVDPDLINAGKQTVSVVSGASYFDSATSFAMIRGGHVDVAVLGGMQVSMAGDLANWMVPG
CCCHHHHHCCHHHHHHHCCCHHHHCCCCEEEEECCCEEEEEECCEEEEECCCHHHHHCCH
AMVKGIGGAMDLVNGAGRVVVLMEHVTRGGAARLVTTCDLPLTGRQVVSRVITNLGVLDV
HHHHHCCHHHHHHCCCCEEEEEEEHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEE
TGAGFELVETAPGVTFDDVVAATAAPVTDGRVQLRSAASSVRERTPSLA
CCCCEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SWTRDEMAARAAAELRDGDYVNLGIGLPTLIPDHLPDGSQVTLHAENGILGVGPFPYED
CCCHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCCCEEEEEECCCEEECCCCCCCC
QVDPDLINAGKQTVSVVSGASYFDSATSFAMIRGGHVDVAVLGGMQVSMAGDLANWMVPG
CCCHHHHHCCHHHHHHHCCCHHHHCCCCEEEEECCCEEEEEECCEEEEECCCHHHHHCCH
AMVKGIGGAMDLVNGAGRVVVLMEHVTRGGAARLVTTCDLPLTGRQVVSRVITNLGVLDV
HHHHHCCHHHHHHCCCCEEEEEEEHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEE
TGAGFELVETAPGVTFDDVVAATAAPVTDGRVQLRSAASSVRERTPSLA
CCCCEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]