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The map label for this gene is omp32 [H]

Identifier: 119899580

GI number: 119899580

Start: 3629820

End: 3630890

Strand: Reverse

Name: omp32 [H]

Synonym: azo3291

Alternate gene names: 119899580

Gene position: 3630890-3629820 (Counterclockwise)

Preceding gene: 119899582

Following gene: 119899579

Centisome position: 82.97

GC content: 64.15

Gene sequence:

>1071_bases
ATGCAAAAGAAACTGATCGCGCTGGCCGTGGCCGGCCTGATGTCCGCTCCGGCTTTCGCTCAGTCCAACGTCACCATCTA
TGGCCTGGTCGACTTCGGCTACGTCTATACCGGTGACAGCGCCCGCTCGGGCGTCAAGTCGCGCAACGCGATTGACGCGG
GCAACTCCGCCGGCAACCGCCTCGGCTTCAAGGGCACGGAAGACCTGGGTAATGGCCTGAAGGCCTCCTTCGTGTATGAA
TCCGCTGTCCGCGGTGACGCCAACGACAACGGCCTGTGGGGCAGCACGGGTTCGCGCCAGTCCTACGTCGCGCTGTCCGG
CAACTTCGGTACGGTCGCGCTGGGCCGCCAATATGCGCCGCAGTACACGCTGGCGAGCGCCGTCGACGCGTTCAGCCGCG
GTACTGTCGCGACCATCGCCAACGTGTACATCCACGAGTCCCGCCTGGACAACCTGGCCGCCTATGTGTCGCCGAACTGG
AGCGGCTTCTCGTTCGTGACCGCGTACACCAACAGCGCCGCCGGCGACGAAGGTATCCACAACGACTTCGGCAACCAGTC
CACCAGTTCCGATGCGCGCGCCTGGGCGATCAGCCCGAGCTACAAGAACGGTCCGGTCTATGTCGCGCTGAACGTTCACC
AGATCCGCGTCAATGCCAGCGACGCCACCACCAAGGTCTGGGACCTCGGCGGCACCTACGATCTGGGCGTGGTCAAGCTC
GGTGCCATCTACGGCGTGCGTGATGTCAGCGACTCCGTGAAGCACAAGCAGTGGGGCCTCACCGCCGTTGTGCCGGTGGG
TGCTGCGGGCAAGATCCAGGCGTCCTACCTGCATCGCAAGAGCGACTGGGATGCTGCGATCAGCGACGCCAAGGTCAGCC
AGTGGGGCATTGGTTACCAGCACGAACTGTCCAAGCGTACCGCTATCTACACGGCCTTCTCCGATATCAACAACAAGGGT
TCGGCCAAGGACCTCGGGCCGGGCGCCGGCTACATCGGCACCGCCCAGACCTCGTCGATCAGCGGCAACTACCAGCGCGG
CTTCACGGTCGGTCTGCGTCACTCCTTCTGA

Upstream 100 bases:

>100_bases
CCTTGCCCGGGCGGTTCGCCGTGGTCATGCGGAACGTTTCCGTAACGGTGAACCTGGCCGTCGCCATGCGAGGGTCCCGT
CTTCAATCAAGGGGTATTAC

Downstream 100 bases:

>100_bases
TCGCGCCCGAGCGCGAACATTGCGGTGTGACGAACGGGTGCTCCGGCACCCGTTCCCTTTTCGTGCCGGCGGCGGGTGGA
ACGCCTCTTTGCCCGCCGTT

Product: outer membrane porin protein

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MQKKLIALAVAGLMSAPAFAQSNVTIYGLVDFGYVYTGDSARSGVKSRNAIDAGNSAGNRLGFKGTEDLGNGLKASFVYE
SAVRGDANDNGLWGSTGSRQSYVALSGNFGTVALGRQYAPQYTLASAVDAFSRGTVATIANVYIHESRLDNLAAYVSPNW
SGFSFVTAYTNSAAGDEGIHNDFGNQSTSSDARAWAISPSYKNGPVYVALNVHQIRVNASDATTKVWDLGGTYDLGVVKL
GAIYGVRDVSDSVKHKQWGLTAVVPVGAAGKIQASYLHRKSDWDAAISDAKVSQWGIGYQHELSKRTAIYTAFSDINNKG
SAKDLGPGAGYIGTAQTSSISGNYQRGFTVGLRHSF

Sequences:

>Translated_356_residues
MQKKLIALAVAGLMSAPAFAQSNVTIYGLVDFGYVYTGDSARSGVKSRNAIDAGNSAGNRLGFKGTEDLGNGLKASFVYE
SAVRGDANDNGLWGSTGSRQSYVALSGNFGTVALGRQYAPQYTLASAVDAFSRGTVATIANVYIHESRLDNLAAYVSPNW
SGFSFVTAYTNSAAGDEGIHNDFGNQSTSSDARAWAISPSYKNGPVYVALNVHQIRVNASDATTKVWDLGGTYDLGVVKL
GAIYGVRDVSDSVKHKQWGLTAVVPVGAAGKIQASYLHRKSDWDAAISDAKVSQWGIGYQHELSKRTAIYTAFSDINNKG
SAKDLGPGAGYIGTAQTSSISGNYQRGFTVGLRHSF
>Mature_356_residues
MQKKLIALAVAGLMSAPAFAQSNVTIYGLVDFGYVYTGDSARSGVKSRNAIDAGNSAGNRLGFKGTEDLGNGLKASFVYE
SAVRGDANDNGLWGSTGSRQSYVALSGNFGTVALGRQYAPQYTLASAVDAFSRGTVATIANVYIHESRLDNLAAYVSPNW
SGFSFVTAYTNSAAGDEGIHNDFGNQSTSSDARAWAISPSYKNGPVYVALNVHQIRVNASDATTKVWDLGGTYDLGVVKL
GAIYGVRDVSDSVKHKQWGLTAVVPVGAAGKIQASYLHRKSDWDAAISDAKVSQWGIGYQHELSKRTAIYTAFSDINNKG
SAKDLGPGAGYIGTAQTSSISGNYQRGFTVGLRHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37595; Mature: 37595

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKLIALAVAGLMSAPAFAQSNVTIYGLVDFGYVYTGDSARSGVKSRNAIDAGNSAGNR
CCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEECCHHHCCCCCCCCCCCCCCCCCC
LGFKGTEDLGNGLKASFVYESAVRGDANDNGLWGSTGSRQSYVALSGNFGTVALGRQYAP
CCCCCCHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCC
QYTLASAVDAFSRGTVATIANVYIHESRLDNLAAYVSPNWSGFSFVTAYTNSAAGDEGIH
CHHHHHHHHHHCCCCCEEHEEEEEEHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCC
NDFGNQSTSSDARAWAISPSYKNGPVYVALNVHQIRVNASDATTKVWDLGGTYDLGVVKL
CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEECCCCCCCHHEEE
GAIYGVRDVSDSVKHKQWGLTAVVPVGAAGKIQASYLHRKSDWDAAISDAKVSQWGIGYQ
HHHHCCHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHCCCCCCHHHCCCCHHHCCCCHH
HELSKRTAIYTAFSDINNKGSAKDLGPGAGYIGTAQTSSISGNYQRGFTVGLRHSF
HHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MQKKLIALAVAGLMSAPAFAQSNVTIYGLVDFGYVYTGDSARSGVKSRNAIDAGNSAGNR
CCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEECCHHHCCCCCCCCCCCCCCCCCC
LGFKGTEDLGNGLKASFVYESAVRGDANDNGLWGSTGSRQSYVALSGNFGTVALGRQYAP
CCCCCCHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCC
QYTLASAVDAFSRGTVATIANVYIHESRLDNLAAYVSPNWSGFSFVTAYTNSAAGDEGIH
CHHHHHHHHHHCCCCCEEHEEEEEEHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCC
NDFGNQSTSSDARAWAISPSYKNGPVYVALNVHQIRVNASDATTKVWDLGGTYDLGVVKL
CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEECCCCCCCHHEEE
GAIYGVRDVSDSVKHKQWGLTAVVPVGAAGKIQASYLHRKSDWDAAISDAKVSQWGIGYQ
HHHHCCHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHCCCCCCHHHCCCCHHHCCCCHH
HELSKRTAIYTAFSDINNKGSAKDLGPGAGYIGTAQTSSISGNYQRGFTVGLRHSF
HHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]