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The map label for this gene is omp32 [H]

Identifier: 119899579

GI number: 119899579

Start: 3628428

End: 3629525

Strand: Reverse

Name: omp32 [H]

Synonym: azo3290

Alternate gene names: 119899579

Gene position: 3629525-3628428 (Counterclockwise)

Preceding gene: 119899580

Following gene: 119899575

Centisome position: 82.94

GC content: 62.02

Gene sequence:

>1098_bases
ATGCAAAAGAAACTGATCGCGCTGGCTGTGGCTGGCCTGATGTCCGCTCCGGCTTTCGCTCAGTCGAACGTGACGATCTA
CGGTGTGGTCGACTTCGGCTACAAGTGGACCGGTGACAGCGCGCTGTCCGGCTATGACTCCCGTTCCGCCATCGATTCCG
GCATCTCCGCTGGCAACCGCCTCGGCTTCAAGGGCACGGAAGATCTGGGCAACGGCCTGAAGGCTTCCTTCGTGTATGAA
ACCGGTATCGTTGGCGACCGCAGCGGTAGCAACGGCCTGTGGGGCGGCGCTGGTTCCCGTCAGTCTTACATTGCCCTGTC
CGGCAACTTCGGTACCGTGGCCCTGGGTCGTCAGTACACCCCGGCGCACGCCCTGCTGGCTGGCAACATCGACCCGTTCG
GCTTCGGCAAGGGTACGGTCGCGTCGCTGGCCAACGTTTACATCAGCCCGGCCCGCCTGGACAACCTGGCTGCCTACGTG
TCGCCGACCTTCGGTGGCTTCAGTGTCGTTGCGGCTTACACCAACCAATACTCTGGCGACGAAACCTCGGGTAACGGCTT
CGGCAACGACGAAGACGCGTGGACCGACGCGCGTGCTTGGGCTATCGCCCCGACCTACAAGAACGGTCCGGTCTACGTTG
CCCTGAACGTCCACCAGATCCGCGGCAATGCGGCTGAAGCCTCCGGCCAAAACGTTGTGGGTACGGTTAAGGCTTGGGAT
CTGGGCGGAACCTACGACTTCGGCGTTGTCAAGGTTGGTGCCGTCTATGGCGTCAATGACATCAAGGATGTCGTGAAGCA
CAAGCAGTGGGCCCTGACCGCCGCTGTGCCGGTTGGCGCCGCTGGCAAGGTTCAGGCTTCCTTCGTTCGCCGCAAGAGCG
AAGTTGATGCCGGTTCTGACGCCCGTGTCAGCCAGTGGGGTATCGGCTACGAGCACGCGCTGTCCAAGCGCACTGCGCTT
TACACCGCCTACGCCGACATCAACAACAAGGGTGCGGCCGACGACGGCGTCTACTCCGCTTCCATCGGCGATGCCACTGG
CACTACTGAAGGTGCCTACCAGCGTGGTTTCACCGTTGGTGTCCGTCACTCCTTCTAA

Upstream 100 bases:

>100_bases
TGGCTGCGTGGGTCATCACAATCGCCGCAACTTCTCGTGCGAGAGGTAAGTCGGGCCGGCGCCAAGGCGACGGTCTCAAC
TTCAAATTGAGGAGAAATAC

Downstream 100 bases:

>100_bases
TTTCGCTTACCAGCGAAATCAGGGATGACAAAAACGGGCGCTTCGGCGCCCGTTTTTTTTTTCACTCCAAGTGCGTGGAA
GTGGTTTCCTGCGCCTGGAT

Product: outer membrane porin protein

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MQKKLIALAVAGLMSAPAFAQSNVTIYGVVDFGYKWTGDSALSGYDSRSAIDSGISAGNRLGFKGTEDLGNGLKASFVYE
TGIVGDRSGSNGLWGGAGSRQSYIALSGNFGTVALGRQYTPAHALLAGNIDPFGFGKGTVASLANVYISPARLDNLAAYV
SPTFGGFSVVAAYTNQYSGDETSGNGFGNDEDAWTDARAWAIAPTYKNGPVYVALNVHQIRGNAAEASGQNVVGTVKAWD
LGGTYDFGVVKVGAVYGVNDIKDVVKHKQWALTAAVPVGAAGKVQASFVRRKSEVDAGSDARVSQWGIGYEHALSKRTAL
YTAYADINNKGAADDGVYSASIGDATGTTEGAYQRGFTVGVRHSF

Sequences:

>Translated_365_residues
MQKKLIALAVAGLMSAPAFAQSNVTIYGVVDFGYKWTGDSALSGYDSRSAIDSGISAGNRLGFKGTEDLGNGLKASFVYE
TGIVGDRSGSNGLWGGAGSRQSYIALSGNFGTVALGRQYTPAHALLAGNIDPFGFGKGTVASLANVYISPARLDNLAAYV
SPTFGGFSVVAAYTNQYSGDETSGNGFGNDEDAWTDARAWAIAPTYKNGPVYVALNVHQIRGNAAEASGQNVVGTVKAWD
LGGTYDFGVVKVGAVYGVNDIKDVVKHKQWALTAAVPVGAAGKVQASFVRRKSEVDAGSDARVSQWGIGYEHALSKRTAL
YTAYADINNKGAADDGVYSASIGDATGTTEGAYQRGFTVGVRHSF
>Mature_365_residues
MQKKLIALAVAGLMSAPAFAQSNVTIYGVVDFGYKWTGDSALSGYDSRSAIDSGISAGNRLGFKGTEDLGNGLKASFVYE
TGIVGDRSGSNGLWGGAGSRQSYIALSGNFGTVALGRQYTPAHALLAGNIDPFGFGKGTVASLANVYISPARLDNLAAYV
SPTFGGFSVVAAYTNQYSGDETSGNGFGNDEDAWTDARAWAIAPTYKNGPVYVALNVHQIRGNAAEASGQNVVGTVKAWD
LGGTYDFGVVKVGAVYGVNDIKDVVKHKQWALTAAVPVGAAGKVQASFVRRKSEVDAGSDARVSQWGIGYEHALSKRTAL
YTAYADINNKGAADDGVYSASIGDATGTTEGAYQRGFTVGVRHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37931; Mature: 37931

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKLIALAVAGLMSAPAFAQSNVTIYGVVDFGYKWTGDSALSGYDSRSAIDSGISAGNR
CCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEECCCCCCCCCCCHHHHHHHCCCCCC
LGFKGTEDLGNGLKASFVYETGIVGDRSGSNGLWGGAGSRQSYIALSGNFGTVALGRQYT
CCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCC
PAHALLAGNIDPFGFGKGTVASLANVYISPARLDNLAAYVSPTFGGFSVVAAYTNQYSGD
CCEEEEECCCCCCCCCCHHHHHHHHHEECHHHHHCCCEEECCCCCCEEEEEEECCCCCCC
ETSGNGFGNDEDAWTDARAWAIAPTYKNGPVYVALNVHQIRGNAAEASGQNVVGTVKAWD
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEE
LGGTYDFGVVKVGAVYGVNDIKDVVKHKQWALTAAVPVGAAGKVQASFVRRKSEVDAGSD
CCCCCCCCEEEEEEEECHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
ARVSQWGIGYEHALSKRTALYTAYADINNKGAADDGVYSASIGDATGTTEGAYQRGFTVG
CCHHHCCCCHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCEEE
VRHSF
EECCC
>Mature Secondary Structure
MQKKLIALAVAGLMSAPAFAQSNVTIYGVVDFGYKWTGDSALSGYDSRSAIDSGISAGNR
CCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEECCCCCCCCCCCHHHHHHHCCCCCC
LGFKGTEDLGNGLKASFVYETGIVGDRSGSNGLWGGAGSRQSYIALSGNFGTVALGRQYT
CCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCC
PAHALLAGNIDPFGFGKGTVASLANVYISPARLDNLAAYVSPTFGGFSVVAAYTNQYSGD
CCEEEEECCCCCCCCCCHHHHHHHHHEECHHHHHCCCEEECCCCCCEEEEEEECCCCCCC
ETSGNGFGNDEDAWTDARAWAIAPTYKNGPVYVALNVHQIRGNAAEASGQNVVGTVKAWD
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEE
LGGTYDFGVVKVGAVYGVNDIKDVVKHKQWALTAAVPVGAAGKVQASFVRRKSEVDAGSD
CCCCCCCCEEEEEEEECHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
ARVSQWGIGYEHALSKRTALYTAYADINNKGAADDGVYSASIGDATGTTEGAYQRGFTVG
CCHHHCCCCHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCEEE
VRHSF
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]