| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is murI [H]
Identifier: 119899045
GI number: 119899045
Start: 3037292
End: 3038107
Strand: Reverse
Name: murI [H]
Synonym: azo2755
Alternate gene names: 119899045
Gene position: 3038107-3037292 (Counterclockwise)
Preceding gene: 119899046
Following gene: 119899041
Centisome position: 69.43
GC content: 67.52
Gene sequence:
>816_bases ATGACCGCAGACGCCCGGGCCTCCCGCTCGATCGGCGTGTTCGATTCGGGCATCGGCGGCCTTACCGTGGTGCGGGCGCT GATGGAGCGCCTGCCCTTCGAGAACATCATCTACTTCGGCGATACCGCGCGTGTGCCCTACGGGGTGAAGTCGGTCGCCA CCATCGAGCAGTTCACCGCGCAGATCACCGACTTCCTGCTCCAGCAGGACGTGAAGATGCTGATCGTGGCGTGCAACACG ATGGCTGCGGTTGCTGCGCACATCGTGGCGGCGCGCGCCGGCGGCATCCCCGTGCTCGACGTGATCGAGGCGGGCGCCCG GGCGGCGGTGGCGGCTTCGCCCGGCGGGCGCATCGGCGTGATCGGCACGCCAACCACGGTCAACAGCAATGCGTACGCAC GCCGCATCCACGAGCTGGACGCTGGCGCCCGCGTCTATTCGCAGGCCTGTCCTTTGTTCGTGCCACTGGTGGAAGAGGGC TGGCTGGATCACCCGGTGACGCGGATGACGGCGCAGGAATACCTGCGTCCGGTGCTGGCGGAAGAGGTGGATAGCCTGGT GCTGGGCTGTACCCACTACCCCTTGCTCAAACCCCTGCTGCGCGACGTGGCCGGGCCGGGGGTGAAGCTGATCGACTCAG CGCTTACCACTGCGGAACTGGCCGCGGAACGGCTCAACGACTGCGGCCTTGCCCAAGGCGGAAGCGCGCCGGCCAATTAC CGCTACTACGTCACCGACGTGCCGCTGCGCTTCCAGACCATCGGCGAGCGCTTTCTGGGACGCTCCCTGGGCAGGGTCGA ACGGGTCGACTGGTAG
Upstream 100 bases:
>100_bases TCAACGGCGACCGTGTGGAGGACAAGGGGCTGGTGCTGGCAGCGGGCGATACCGTCGTGCTGCAGGTGGGCAAGCGCAAG TTCGCGGCGGTCGTGCTCGA
Downstream 100 bases:
>100_bases CGGGAATCTGCCGGGCCGGTAAAGGCCGGACCGGTCATGCGGCGCCGGTCGCCACCGGCCGCGCCGGGTCAGAACACCAT TCGCTCCACGAGCCGGCATA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTADARASRSIGVFDSGIGGLTVVRALMERLPFENIIYFGDTARVPYGVKSVATIEQFTAQITDFLLQQDVKMLIVACNT MAAVAAHIVAARAGGIPVLDVIEAGARAAVAASPGGRIGVIGTPTTVNSNAYARRIHELDAGARVYSQACPLFVPLVEEG WLDHPVTRMTAQEYLRPVLAEEVDSLVLGCTHYPLLKPLLRDVAGPGVKLIDSALTTAELAAERLNDCGLAQGGSAPANY RYYVTDVPLRFQTIGERFLGRSLGRVERVDW
Sequences:
>Translated_271_residues MTADARASRSIGVFDSGIGGLTVVRALMERLPFENIIYFGDTARVPYGVKSVATIEQFTAQITDFLLQQDVKMLIVACNT MAAVAAHIVAARAGGIPVLDVIEAGARAAVAASPGGRIGVIGTPTTVNSNAYARRIHELDAGARVYSQACPLFVPLVEEG WLDHPVTRMTAQEYLRPVLAEEVDSLVLGCTHYPLLKPLLRDVAGPGVKLIDSALTTAELAAERLNDCGLAQGGSAPANY RYYVTDVPLRFQTIGERFLGRSLGRVERVDW >Mature_270_residues TADARASRSIGVFDSGIGGLTVVRALMERLPFENIIYFGDTARVPYGVKSVATIEQFTAQITDFLLQQDVKMLIVACNTM AAVAAHIVAARAGGIPVLDVIEAGARAAVAASPGGRIGVIGTPTTVNSNAYARRIHELDAGARVYSQACPLFVPLVEEGW LDHPVTRMTAQEYLRPVLAEEVDSLVLGCTHYPLLKPLLRDVAGPGVKLIDSALTTAELAAERLNDCGLAQGGSAPANYR YYVTDVPLRFQTIGERFLGRSLGRVERVDW
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=242, Percent_Identity=30.5785123966942, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 29068; Mature: 28937
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADARASRSIGVFDSGIGGLTVVRALMERLPFENIIYFGDTARVPYGVKSVATIEQFTA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHH QITDFLLQQDVKMLIVACNTMAAVAAHIVAARAGGIPVLDVIEAGARAAVAASPGGRIGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCEEEE IGTPTTVNSNAYARRIHELDAGARVYSQACPLFVPLVEEGWLDHPVTRMTAQEYLRPVLA EECCCEECCHHHHHHHHHHCCHHHHHHHCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHH EEVDSLVLGCTHYPLLKPLLRDVAGPGVKLIDSALTTAELAAERLNDCGLAQGGSAPANY HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RYYVTDVPLRFQTIGERFLGRSLGRVERVDW EEEEEECCHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure TADARASRSIGVFDSGIGGLTVVRALMERLPFENIIYFGDTARVPYGVKSVATIEQFTA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHH QITDFLLQQDVKMLIVACNTMAAVAAHIVAARAGGIPVLDVIEAGARAAVAASPGGRIGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCEEEE IGTPTTVNSNAYARRIHELDAGARVYSQACPLFVPLVEEGWLDHPVTRMTAQEYLRPVLA EECCCEECCHHHHHHHHHHCCHHHHHHHCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHH EEVDSLVLGCTHYPLLKPLLRDVAGPGVKLIDSALTTAELAAERLNDCGLAQGGSAPANY HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RYYVTDVPLRFQTIGERFLGRSLGRVERVDW EEEEEECCHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA