Click here to switch to the map view.

The map label for this gene is omlA [H]

Identifier: 119898868

GI number: 119898868

Start: 2857314

End: 2857823

Strand: Reverse

Name: omlA [H]

Synonym: azo2577

Alternate gene names: 119898868

Gene position: 2857823-2857314 (Counterclockwise)

Preceding gene: 119898870

Following gene: 119898867

Centisome position: 65.31

GC content: 62.94

Gene sequence:

>510_bases
ATGCAGGCGCTGCCGCGGTACGGCCCTATGTTATATTTTTTGCCCTTTACTGAGAACCAGCGCCGCTTTCGGCGGTGCAT
TACCGCGAAACTCCCCATGCGTTCCTTGCTCATCCCCGCGTTCGTCGCTGCCAGCATGCTGGCCGGCTGCTCCATTGGCA
CGATCGCGCAGAAGGTCGATCCCTACCGGATCGACATCCGCCAGGGCAACTATGTCGATCAGGCCATGGTGTCCCAGCTG
AAACGCGGCATGAGCCGTGAGCAGGTCCGCTTCGTGCTCGGCACGCCGCTGGTGGTCGATATCTTCCGCAGCAACCGCTG
GGACTACGTCTACCGCTTCAAGCCGGGCAATGGCGAGCCGGAACAGCGCGTGTTCTCGGTGTTCTTCGTCGATGACAAGC
TGGACCACGTCGAGGGCGACATCCTCGCCGGCGACCCGCAGGAGGCCGCTGCCAGCCAGCAGGCCAACCGCAGCCGCGTG
GTTGAAGTGCCCGCGGAAAGCAAGAAGTGA

Upstream 100 bases:

>100_bases
TGGAAGAGGTCGAGGATCTTGAGGCGCGGATAGGTCGCCTTGAGGCCGATGCTCTTGAGGTTCTTGGAGTTCTCGGACAT
GTTCGTCCTGTGGGGAGAGA

Downstream 100 bases:

>100_bases
CGTGGGCGGCCCAGGCCGCTCCAATCAGGAACAAGACATGACGACACCTGTACGTGTAGCAATCGCAGGCGCTTCCGGCC
GCATGGGCCGCATGCTCATC

Product: putative outer membrane lipoprotein OmlA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MQALPRYGPMLYFLPFTENQRRFRRCITAKLPMRSLLIPAFVAASMLAGCSIGTIAQKVDPYRIDIRQGNYVDQAMVSQL
KRGMSREQVRFVLGTPLVVDIFRSNRWDYVYRFKPGNGEPEQRVFSVFFVDDKLDHVEGDILAGDPQEAAASQQANRSRV
VEVPAESKK

Sequences:

>Translated_169_residues
MQALPRYGPMLYFLPFTENQRRFRRCITAKLPMRSLLIPAFVAASMLAGCSIGTIAQKVDPYRIDIRQGNYVDQAMVSQL
KRGMSREQVRFVLGTPLVVDIFRSNRWDYVYRFKPGNGEPEQRVFSVFFVDDKLDHVEGDILAGDPQEAAASQQANRSRV
VEVPAESKK
>Mature_169_residues
MQALPRYGPMLYFLPFTENQRRFRRCITAKLPMRSLLIPAFVAASMLAGCSIGTIAQKVDPYRIDIRQGNYVDQAMVSQL
KRGMSREQVRFVLGTPLVVDIFRSNRWDYVYRFKPGNGEPEQRVFSVFFVDDKLDHVEGDILAGDPQEAAASQQANRSRV
VEVPAESKK

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=96, Percent_Identity=40.625, Blast_Score=73, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 19260; Mature: 19260

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALPRYGPMLYFLPFTENQRRFRRCITAKLPMRSLLIPAFVAASMLAGCSIGTIAQKVD
CCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCC
PYRIDIRQGNYVDQAMVSQLKRGMSREQVRFVLGTPLVVDIFRSNRWDYVYRFKPGNGEP
CEEEEEECCCCHHHHHHHHHHHCCCHHHEEHHCCCCCEEEHHHCCCCCEEEEEECCCCCH
EQRVFSVFFVDDKLDHVEGDILAGDPQEAAASQQANRSRVVEVPAESKK
HHHEEEEEEECCCCCCCCCCEEECCCHHHHHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure
MQALPRYGPMLYFLPFTENQRRFRRCITAKLPMRSLLIPAFVAASMLAGCSIGTIAQKVD
CCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCC
PYRIDIRQGNYVDQAMVSQLKRGMSREQVRFVLGTPLVVDIFRSNRWDYVYRFKPGNGEP
CEEEEEECCCCHHHHHHHHHHHCCCHHHEEHHCCCCCEEEHHHCCCCCEEEEEECCCCCH
EQRVFSVFFVDDKLDHVEGDILAGDPQEAAASQQANRSRVVEVPAESKK
HHHEEEEEEECCCCCCCCCCEEECCCHHHHHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334; 10984043 [H]