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The map label for this gene is recN [H]

Identifier: 119898870

GI number: 119898870

Start: 2858307

End: 2859974

Strand: Reverse

Name: recN [H]

Synonym: azo2579

Alternate gene names: 119898870

Gene position: 2859974-2858307 (Counterclockwise)

Preceding gene: 119898871

Following gene: 119898868

Centisome position: 65.36

GC content: 71.7

Gene sequence:

>1668_bases
ATGCTCCGCCGCCTGACCATCCGCGACTTCGTCATCGTCGACCGCCTGGAACTCGAATTCGGCCCCGGTTTCGGCGCCCT
CACCGGCGAAACCGGCGCGGGCAAATCCATCCTGCTCGACGCGCTCGGGCTGGCGCTCGGGGCGCGTACCGACAGCGCCG
TGGTACGCCGCGGGCGCGACAAGGCCGACATCGCCGCCGAGTTCGATCCCCCGCGCGAACCGGCCGCCCTGGCGGCCTTC
AGCGCCTGGCTGGCCGAGCAGGAGCTGGCGGCGGACGACGACATCGTGATCCTGCGTCGTGTCGTCGATGCCGGCGGGCG
CAGCCGCGCGTGGATCAACGGCACCCCGGTCACCCTGGCGCAACTGCGCGACGCGGGCGAATGGCTGGCGGACATCCACG
GCCAGCACGCCCACCACGCCCTGCTGCGCAGCGACGCCCAACGCGTCCTGCTCGACACCCACGCCGGAGCCACCGCGCTG
GCGGCGGAAGTCGCTGCCAGCCATCGGGAATGGCAGCGGGTGGTCGCGCTGCGTCGTTCAGCCGAACAGGATTCTGCTGC
CTCCGCGCGCGAGCGCGAGTTGCTGTCGTGGCAGCTGAAGGAGCTTGACGACCTGGCGTTCGACGCCGCGGAGTGGAGCG
AACTGAACGCCGAACACGGTCGGCTCGCCCATGCCGCGAGCCTGATGCAGGGCGCGGATGAAACCCTGGCTGCACTGGGC
GAGGGCGACTACGCGGTGTGCGCGCTGCTCAGCCAGCTCGAAGCGAGAATCGCGACGCTGACGGAGGTGGATGCGGGCCT
CGCCGATGTGCGCGAGCTGCTGTCCTCGGCGGCCATCCAGACCGACGAGGCGCTGCACGCCTTGCGCCGCTACCGCGAGC
GGCTCGACCTCGACCCGCAGCGTCTCGGGCAGGTCGAGCAGCGTATCGGCACCGTCACCGACGTCGCCCGCAAATACCGC
GTTGCCCCGGAAGACCTGCCCGCGCTGGCGGACGAGTGGCGCGCGCGCAACGAAACCCTTGCTGCCCAGGCCGATCCGGT
ACGGCTGGCCGAGGCCGAGGCCGAGGCCCGCCGCGCCTACGACGCCGCGGCGCAGCGCCTCAGCGCGGCGCGTCGTCCCG
CCGCGGCCGCGTTGTCGCAGGAGATCACCACCGCCATGCAGACGCTGGCGATGGAAGGAGGGCGCTTCGAAGTCGCGCTG
GTGCCGGGCGAGCCCGCGGCGCATGGCCTGGAGCAGGTGGAGTTCCGGGTCGCCGCGAACGCGGGGCAGGAACTGCGCAG
CATGGCCAAGGTGGCCTCGGGCGGCGAACTTTCGCGCATCGGCCTCGCCATCCAGGTGATGACGAGCCGCGACTCGGCGA
CCCCGACGCTGATCTTCGACGAAGTGGACGTGGGCATCGGCGGCCGCGTCGCGGAGATTGTCGGCACCTTGCTGAAGCGC
CTGGGCAGCGACCGCCAGGTGTTGTGCGTGACCCACCTGCCTCAGGTGGCCGCCTGCGCCGACTGGCAGTGGCGCATCGC
CAAGGCAGAGCGTGACGGCGAAACCCTGAGCGACGTGCGTCCGCTCGACGCGCACGCCCGCATCGAGGAAATCGCGCGCA
TGCTGGGCGGCGTCAACATCACCGCCACCACGCGGCAGCACGCCGCGGAGATGCTGGGGCTGGGGTAA

Upstream 100 bases:

>100_bases
TACAACTACTACGCGATGCTGCGCGAAAAGCTGCACTGGAGCGCTGTTCCCCGCCACAACTGACCGGCCCCTCGCGCCGG
GCTTCTGCCGAATCCATCCT

Downstream 100 bases:

>100_bases
GGCCTGCGCCGCCGCCGGGCGGCGCTCAGTGCTCGCCGTGGCGGTTGGGGCAATCCTTGCGCAGGCAGTCGGCGTACAGG
TACAGCGCGTGTTCCTTTAC

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MLRRLTIRDFVIVDRLELEFGPGFGALTGETGAGKSILLDALGLALGARTDSAVVRRGRDKADIAAEFDPPREPAALAAF
SAWLAEQELAADDDIVILRRVVDAGGRSRAWINGTPVTLAQLRDAGEWLADIHGQHAHHALLRSDAQRVLLDTHAGATAL
AAEVAASHREWQRVVALRRSAEQDSAASARERELLSWQLKELDDLAFDAAEWSELNAEHGRLAHAASLMQGADETLAALG
EGDYAVCALLSQLEARIATLTEVDAGLADVRELLSSAAIQTDEALHALRRYRERLDLDPQRLGQVEQRIGTVTDVARKYR
VAPEDLPALADEWRARNETLAAQADPVRLAEAEAEARRAYDAAAQRLSAARRPAAAALSQEITTAMQTLAMEGGRFEVAL
VPGEPAAHGLEQVEFRVAANAGQELRSMAKVASGGELSRIGLAIQVMTSRDSATPTLIFDEVDVGIGGRVAEIVGTLLKR
LGSDRQVLCVTHLPQVAACADWQWRIAKAERDGETLSDVRPLDAHARIEEIARMLGGVNITATTRQHAAEMLGLG

Sequences:

>Translated_555_residues
MLRRLTIRDFVIVDRLELEFGPGFGALTGETGAGKSILLDALGLALGARTDSAVVRRGRDKADIAAEFDPPREPAALAAF
SAWLAEQELAADDDIVILRRVVDAGGRSRAWINGTPVTLAQLRDAGEWLADIHGQHAHHALLRSDAQRVLLDTHAGATAL
AAEVAASHREWQRVVALRRSAEQDSAASARERELLSWQLKELDDLAFDAAEWSELNAEHGRLAHAASLMQGADETLAALG
EGDYAVCALLSQLEARIATLTEVDAGLADVRELLSSAAIQTDEALHALRRYRERLDLDPQRLGQVEQRIGTVTDVARKYR
VAPEDLPALADEWRARNETLAAQADPVRLAEAEAEARRAYDAAAQRLSAARRPAAAALSQEITTAMQTLAMEGGRFEVAL
VPGEPAAHGLEQVEFRVAANAGQELRSMAKVASGGELSRIGLAIQVMTSRDSATPTLIFDEVDVGIGGRVAEIVGTLLKR
LGSDRQVLCVTHLPQVAACADWQWRIAKAERDGETLSDVRPLDAHARIEEIARMLGGVNITATTRQHAAEMLGLG
>Mature_555_residues
MLRRLTIRDFVIVDRLELEFGPGFGALTGETGAGKSILLDALGLALGARTDSAVVRRGRDKADIAAEFDPPREPAALAAF
SAWLAEQELAADDDIVILRRVVDAGGRSRAWINGTPVTLAQLRDAGEWLADIHGQHAHHALLRSDAQRVLLDTHAGATAL
AAEVAASHREWQRVVALRRSAEQDSAASARERELLSWQLKELDDLAFDAAEWSELNAEHGRLAHAASLMQGADETLAALG
EGDYAVCALLSQLEARIATLTEVDAGLADVRELLSSAAIQTDEALHALRRYRERLDLDPQRLGQVEQRIGTVTDVARKYR
VAPEDLPALADEWRARNETLAAQADPVRLAEAEAEARRAYDAAAQRLSAARRPAAAALSQEITTAMQTLAMEGGRFEVAL
VPGEPAAHGLEQVEFRVAANAGQELRSMAKVASGGELSRIGLAIQVMTSRDSATPTLIFDEVDVGIGGRVAEIVGTLLKR
LGSDRQVLCVTHLPQVAACADWQWRIAKAERDGETLSDVRPLDAHARIEEIARMLGGVNITATTRQHAAEMLGLG

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=561, Percent_Identity=42.9590017825312, Blast_Score=402, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59795; Mature: 59795

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRLTIRDFVIVDRLELEFGPGFGALTGETGAGKSILLDALGLALGARTDSAVVRRGRD
CCCEEEHHHHHEEEHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
KADIAAEFDPPREPAALAAFSAWLAEQELAADDDIVILRRVVDAGGRSRAWINGTPVTLA
CCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEECCCCHHHH
QLRDAGEWLADIHGQHAHHALLRSDAQRVLLDTHAGATALAAEVAASHREWQRVVALRRS
HHHHHHHHHHHHCCCHHHHHHHHHCHHHEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEQDSAASARERELLSWQLKELDDLAFDAAEWSELNAEHGRLAHAASLMQGADETLAALG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHC
EGDYAVCALLSQLEARIATLTEVDAGLADVRELLSSAAIQTDEALHALRRYRERLDLDPQ
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH
RLGQVEQRIGTVTDVARKYRVAPEDLPALADEWRARNETLAAQADPVRLAEAEAEARRAY
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHH
DAAAQRLSAARRPAAAALSQEITTAMQTLAMEGGRFEVALVPGEPAAHGLEQVEFRVAAN
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHCCHHHHHHHHHHC
AGQELRSMAKVASGGELSRIGLAIQVMTSRDSATPTLIFDEVDVGIGGRVAEIVGTLLKR
CCHHHHHHHHHHCCCCEEEHEEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
LGSDRQVLCVTHLPQVAACADWQWRIAKAERDGETLSDVRPLDAHARIEEIARMLGGVNI
HCCCCEEEEEECCCHHHHHCCCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCE
TATTRQHAAEMLGLG
EECCHHHHHHHHCCC
>Mature Secondary Structure
MLRRLTIRDFVIVDRLELEFGPGFGALTGETGAGKSILLDALGLALGARTDSAVVRRGRD
CCCEEEHHHHHEEEHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
KADIAAEFDPPREPAALAAFSAWLAEQELAADDDIVILRRVVDAGGRSRAWINGTPVTLA
CCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEECCCCHHHH
QLRDAGEWLADIHGQHAHHALLRSDAQRVLLDTHAGATALAAEVAASHREWQRVVALRRS
HHHHHHHHHHHHCCCHHHHHHHHHCHHHEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEQDSAASARERELLSWQLKELDDLAFDAAEWSELNAEHGRLAHAASLMQGADETLAALG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHC
EGDYAVCALLSQLEARIATLTEVDAGLADVRELLSSAAIQTDEALHALRRYRERLDLDPQ
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH
RLGQVEQRIGTVTDVARKYRVAPEDLPALADEWRARNETLAAQADPVRLAEAEAEARRAY
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHH
DAAAQRLSAARRPAAAALSQEITTAMQTLAMEGGRFEVALVPGEPAAHGLEQVEFRVAAN
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHCCHHHHHHHHHHC
AGQELRSMAKVASGGELSRIGLAIQVMTSRDSATPTLIFDEVDVGIGGRVAEIVGTLLKR
CCHHHHHHHHHHCCCCEEEHEEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
LGSDRQVLCVTHLPQVAACADWQWRIAKAERDGETLSDVRPLDAHARIEEIARMLGGVNI
HCCCCEEEEEECCCHHHHHCCCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCE
TATTRQHAAEMLGLG
EECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]