| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is rseA [C]
Identifier: 119897922
GI number: 119897922
Start: 1793073
End: 1793618
Strand: Direct
Name: rseA [C]
Synonym: azo1631
Alternate gene names: 119897922
Gene position: 1793073-1793618 (Clockwise)
Preceding gene: 119897921
Following gene: 119897923
Centisome position: 40.97
GC content: 67.22
Gene sequence:
>546_bases ATGAAGGAAAAACTCTCGGCTTTGCTCGACGGCGTTCTCGATGAACATGCCGTGGCTCCCACGCTGAACGGCTTGCGTAG CGACAGCGCGCTGCGCAAGGAATGGGACGCCTATTGCCTCATCGGAGATGTATTGAGAGGCGATTACCACGGGGCGCCCG ATTTTGTCGACAAGGTCATGGCTCGGGTCGATGCCGAGCCGGTTGTGCTTGCGCCGCGTCTTGCCGCCGCGCGGTCCCCT GGCGGCTGGCGCGTCGCGCTGCCGCTGGCGGCTTCGGTCATGGGGGTTGCAGCGGTAGGCTGGGTCGCCGCCAACCTGCA CTCCGCCCGCGGCGACGCTTCCGCGCCGCTGCAGATGCAACGCATGGCAAGCGCCCCCGTCGGCACCGCGGTGCCGGCAA CGGTGACGCGGGCGCCGGTCTCCCAGGGAGAGGCGCATCGGGAATACGTGTTCGCTCACCAGTCCATGACGGCCGGCGGT CCGATTCCCGGCGCCGTTCAGTATGTCAGGACGGTCACCGAGACCCAGCAGGGCGCAGGACAATGA
Upstream 100 bases:
>100_bases GACGGTGCGGTCGCGGATCTTCCGTGCCCGCGAAGCGATTGCAGAACGGTTGCGCCCGCTGCTCGACACGGCGCCGGACA AACGTTGGTAGGTGGCAGGA
Downstream 100 bases:
>100_bases AACGATGGTTTGCGGCGGCGGGGCTTTGTCTGGCCCTGCTCCCGGGGGCGGCTCAGGCCGAGGCGCCTTCCGACCCGCTC GGCTGGCTGAACAGGATCGC
Product: putative sigma-E factor, negative regulatory protein
Products: NA
Alternate protein names: Sigma-E Factor Negative Regulatory Protein; Anti Sigma-E Protein RseA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKEKLSALLDGVLDEHAVAPTLNGLRSDSALRKEWDAYCLIGDVLRGDYHGAPDFVDKVMARVDAEPVVLAPRLAAARSP GGWRVALPLAASVMGVAAVGWVAANLHSARGDASAPLQMQRMASAPVGTAVPATVTRAPVSQGEAHREYVFAHQSMTAGG PIPGAVQYVRTVTETQQGAGQ
Sequences:
>Translated_181_residues MKEKLSALLDGVLDEHAVAPTLNGLRSDSALRKEWDAYCLIGDVLRGDYHGAPDFVDKVMARVDAEPVVLAPRLAAARSP GGWRVALPLAASVMGVAAVGWVAANLHSARGDASAPLQMQRMASAPVGTAVPATVTRAPVSQGEAHREYVFAHQSMTAGG PIPGAVQYVRTVTETQQGAGQ >Mature_181_residues MKEKLSALLDGVLDEHAVAPTLNGLRSDSALRKEWDAYCLIGDVLRGDYHGAPDFVDKVMARVDAEPVVLAPRLAAARSP GGWRVALPLAASVMGVAAVGWVAANLHSARGDASAPLQMQRMASAPVGTAVPATVTRAPVSQGEAHREYVFAHQSMTAGG PIPGAVQYVRTVTETQQGAGQ
Specific function: Negative Regulator Of Rpoe. [C]
COG id: COG3073
COG function: function code T; Negative regulator of sigma E activity
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18890; Mature: 18890
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKLSALLDGVLDEHAVAPTLNGLRSDSALRKEWDAYCLIGDVLRGDYHGAPDFVDKVM CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHH ARVDAEPVVLAPRLAAARSPGGWRVALPLAASVMGVAAVGWVAANLHSARGDASAPLQMQ HHCCCCCEEECCHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RMASAPVGTAVPATVTRAPVSQGEAHREYVFAHQSMTAGGPIPGAVQYVRTVTETQQGAG HHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC Q C >Mature Secondary Structure MKEKLSALLDGVLDEHAVAPTLNGLRSDSALRKEWDAYCLIGDVLRGDYHGAPDFVDKVM CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHH ARVDAEPVVLAPRLAAARSPGGWRVALPLAASVMGVAAVGWVAANLHSARGDASAPLQMQ HHCCCCCEEECCHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RMASAPVGTAVPATVTRAPVSQGEAHREYVFAHQSMTAGGPIPGAVQYVRTVTETQQGAG HHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA