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The map label for this gene is ycaR [C]

Identifier: 119897762

GI number: 119897762

Start: 1603536

End: 1603724

Strand: Direct

Name: ycaR [C]

Synonym: azo1471

Alternate gene names: 119897762

Gene position: 1603536-1603724 (Clockwise)

Preceding gene: 119897761

Following gene: 119897763

Centisome position: 36.64

GC content: 66.14

Gene sequence:

>189_bases
ATGGACGCCCGCCTGCTTGAAATCCTCGTCTGCCCGCTGTGCAAGGGTCCGCTCGATTACCTCAAGGACAAGCAGGAGCT
GGTCTGCAAGGCCGACCGCCTCGCGTTCCCGATCCGCGACGGCATCCCGGTGATGCTGGAAGAGGAAGCGCGCGCGTTGG
CCGCCGAGGACGTGGACGCGCTGCGTTGA

Upstream 100 bases:

>100_bases
GTAAAATGCGCGCCTTTCGCACCGGCCGACGCCTGGGAATTCCCGGTGACGGCCGAAATCGGTTCGGGTGCCGCCGAACG
CATCCTGGAGAGACTGCAAC

Downstream 100 bases:

>100_bases
GCGCCGCCATGTCCGCCTTCCGCATCGTCATTCCCGCCCGTTTCGCCTCCAGCCGGCTGCCGGGCAAGCCGCTCGCCGAC
ATTGCCGGCAAGCCGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MDARLLEILVCPLCKGPLDYLKDKQELVCKADRLAFPIRDGIPVMLEEEARALAAEDVDALR

Sequences:

>Translated_62_residues
MDARLLEILVCPLCKGPLDYLKDKQELVCKADRLAFPIRDGIPVMLEEEARALAAEDVDALR
>Mature_62_residues
MDARLLEILVCPLCKGPLDYLKDKQELVCKADRLAFPIRDGIPVMLEEEARALAAEDVDALR

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=57, Percent_Identity=64.9122807017544, Blast_Score=82, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1471_AZOSB (A1K5I3)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_932975.1
- ProteinModelPortal:   A1K5I3
- SMR:   A1K5I3
- STRING:   A1K5I3
- GeneID:   4609179
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo1471
- eggNOG:   COG2835
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- PhylomeDB:   A1K5I3
- ProtClustDB:   CLSK2487408
- BioCyc:   ASP62928:AZO1471-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 6954; Mature: 6954

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARLLEILVCPLCKGPLDYLKDKQELVCKADRLAFPIRDGIPVMLEEEARALAAEDVDA
CCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHH
LR
CC
>Mature Secondary Structure
MDARLLEILVCPLCKGPLDYLKDKQELVCKADRLAFPIRDGIPVMLEEEARALAAEDVDA
CCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHH
LR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA