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The map label for this gene is flhD [H]

Identifier: 119897737

GI number: 119897737

Start: 1576751

End: 1577074

Strand: Direct

Name: flhD [H]

Synonym: azo1446

Alternate gene names: 119897737

Gene position: 1576751-1577074 (Clockwise)

Preceding gene: 119897736

Following gene: 119897738

Centisome position: 36.03

GC content: 64.51

Gene sequence:

>324_bases
GTGAAACGCCCCGATTTTCAGGCAGAAATACGCGAACTGAATCTCGCCTATCTCATGCTGGCGCAGCAGATGCTGCGCAG
CGACCGGGAGACGGCGATGTTCAGGCTGGGCGTCAGCAAGGACGTCGCCGAGCTGATCGAGGGCCTGTCGGCCGCGAAGC
TCGTGCGCATGGCCAACAGCCAGATGCTGATGCCCAGTTTCCGTTTCGATGATGCGCAGCTTGCCCGGCTGATGGCCGGC
GAGGGGCGCGACCCGGCCACCTCCAGCCTGCATGCGGCAATCATCGCCGCGGGCAAGGCTGTGCAGGCTTCGGCCCAGGA
GTAA

Upstream 100 bases:

>100_bases
TGCGACATGTCCACGCGGCCACTCAGGGTATTCGTGCTTGCAGCTCCTTACAAATTACTTTAAGTTCGGGGTGCTTGTTC
CTGAAAGGGAGCTTTAATCC

Downstream 100 bases:

>100_bases
GAGCATGAAAAATAAGCGCATCATTGACGAGGCGGAAGACATCCGCCGCGCAGTGGAAATGGTGCAGCTCGGTGCGCGCA
TGCAGATGCTGGAGGTGGAA

Product: flagellar transcriptional activator FlhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKRPDFQAEIRELNLAYLMLAQQMLRSDRETAMFRLGVSKDVAELIEGLSAAKLVRMANSQMLMPSFRFDDAQLARLMAG
EGRDPATSSLHAAIIAAGKAVQASAQE

Sequences:

>Translated_107_residues
MKRPDFQAEIRELNLAYLMLAQQMLRSDRETAMFRLGVSKDVAELIEGLSAAKLVRMANSQMLMPSFRFDDAQLARLMAG
EGRDPATSSLHAAIIAAGKAVQASAQE
>Mature_107_residues
MKRPDFQAEIRELNLAYLMLAQQMLRSDRETAMFRLGVSKDVAELIEGLSAAKLVRMANSQMLMPSFRFDDAQLARLMAG
EGRDPATSSLHAAIIAAGKAVQASAQE

Specific function: Transcriptional activator. Involved in the regulation of a number of genetic systems [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FlhD family [H]

Homologues:

Organism=Escherichia coli, GI145693151, Length=99, Percent_Identity=29.2929292929293, Blast_Score=65, Evalue=9e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007911
- ProDom:   PD015582 [H]

Pfam domain/function: PF05247 FlhD [H]

EC number: NA

Molecular weight: Translated: 11741; Mature: 11741

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPDFQAEIRELNLAYLMLAQQMLRSDRETAMFRLGVSKDVAELIEGLSAAKLVRMANS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
QMLMPSFRFDDAQLARLMAGEGRDPATSSLHAAIIAAGKAVQASAQE
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure
MKRPDFQAEIRELNLAYLMLAQQMLRSDRETAMFRLGVSKDVAELIEGLSAAKLVRMANS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
QMLMPSFRFDDAQLARLMAGEGRDPATSSLHAAIIAAGKAVQASAQE
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA