| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is purK [H]
Identifier: 119897670
GI number: 119897670
Start: 1506220
End: 1507401
Strand: Direct
Name: purK [H]
Synonym: azo1379
Alternate gene names: 119897670
Gene position: 1506220-1507401 (Clockwise)
Preceding gene: 119897669
Following gene: 119897671
Centisome position: 34.42
GC content: 68.61
Gene sequence:
>1182_bases ATGTCCGAATCCGCCCTGTCCGCGCCCATCCTGCCGCCCGCCACGCTGGGCATGTTGGGGGGAGGCCAGCTCGGCCGCTT CTTCGTCTCCGCGGCACACGAGATGGGGTACAAGGTCTGGGTGCTCGACCCTGACCCCCACAGTCCCGCCGGGCGTATCG CCGATTTCCATCTCGTCGCCGCCTATGACGACTATGCCGCGCTCGACCGCGTGGCGGCGGAGTGCGCCGCGGTGACCACC GAGTTCGAGAACGTGCCCGCCGCGACGCTGGACTATCTGGCGAAGTTCGTCCCGGTGCGACCCGGGGCAGCCGCCGTCGC GGTGTGTCAGAACCGCATCGAGGAAAAGGGTTTTCTGGCCGGCAACGGATTGCCGCACGGCCCATATGCCGCCATCCGCA GCGATGAGGATTTGCGCGCGGCCGACGCTGCGCTCTTTCCTGCAGTGCTTAAAGTGGCGCGCTTCGGCTACGACGGCAAG GGGCAGGCGCGGGTCGCCGACGTGGATGAGGCCTTGGCGGCCTTTCATCAGTTCAAGGGCGAGCCCTGCGTGCTGGAAAA ACTGCTCCGGCTCGACTTCGAACTTTCGGTCGTGCTGGCGCGCGACGAGGCGGGCGCGGTGCGGTGTTTCCCGGCCGCCG AGAATCGTCACCGCCGCGGCATCCTGGATGTGACGATTGCGCCCGCGCAATCGGCCCCGGCCGGCCTGCGCGACGAAGCG CAGGTGGTCGCGGCGCGAATCGCGGAGCACCTCGGCTATGTTGGAACGCTGGGGGTGGAGTTCTTTGTCTGCGAGGGCGT CCTCTACGTCAATGAGATGGCGCCGCGGCCGCACAACAGCGGCCATCACACCATCGACGCCTGCGACGTCAGCCAGTACG ACCAACAGGTGCGCGCGCTGTGCGGGCTGCCGCTGGGCGTGCCCCGTCAGCACTCCGCCGCGGCGATGGTGAATCTGCTG GGCGAGCTGTGGTACGCCGACGGGCACGCCACGGGTGCCTACCGTGAACCGGACTGGCGAGTGCTCGCCGACGTGCCCGG CCTGAGGCTCCATCTGTACGGTAAGCACCACGCCCGCCCGGGGCGCAAGATGGGGCATTTCACGGTGGTGGGCGAGGATC AGGCGGCCGTGCTGGCGCAGGCCTTGCGTGCTCGCGGCGCGATCGGGGTGACTGACGAATGA
Upstream 100 bases:
>100_bases CCGGGGAAGGGCACGCCGGATGTCATCGCCCCGACGTGCTTCCGGCGCCGTCCCTCTTCCGTCCATCTCCCTTTCGCCGA CCGATTGTTCCGAGGCTCGC
Downstream 100 bases:
>100_bases GGCCGCTCGGCGTCGTGCCGGCGCAGGAAGACAACATCCAGAGTGCTGCGGAGGCGCTGCGCGCAGGCGAACTTGTCGGC CTGCCGACCGAAACCGTGTA
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSESALSAPILPPATLGMLGGGQLGRFFVSAAHEMGYKVWVLDPDPHSPAGRIADFHLVAAYDDYAALDRVAAECAAVTT EFENVPAATLDYLAKFVPVRPGAAAVAVCQNRIEEKGFLAGNGLPHGPYAAIRSDEDLRAADAALFPAVLKVARFGYDGK GQARVADVDEALAAFHQFKGEPCVLEKLLRLDFELSVVLARDEAGAVRCFPAAENRHRRGILDVTIAPAQSAPAGLRDEA QVVAARIAEHLGYVGTLGVEFFVCEGVLYVNEMAPRPHNSGHHTIDACDVSQYDQQVRALCGLPLGVPRQHSAAAMVNLL GELWYADGHATGAYREPDWRVLADVPGLRLHLYGKHHARPGRKMGHFTVVGEDQAAVLAQALRARGAIGVTDE
Sequences:
>Translated_393_residues MSESALSAPILPPATLGMLGGGQLGRFFVSAAHEMGYKVWVLDPDPHSPAGRIADFHLVAAYDDYAALDRVAAECAAVTT EFENVPAATLDYLAKFVPVRPGAAAVAVCQNRIEEKGFLAGNGLPHGPYAAIRSDEDLRAADAALFPAVLKVARFGYDGK GQARVADVDEALAAFHQFKGEPCVLEKLLRLDFELSVVLARDEAGAVRCFPAAENRHRRGILDVTIAPAQSAPAGLRDEA QVVAARIAEHLGYVGTLGVEFFVCEGVLYVNEMAPRPHNSGHHTIDACDVSQYDQQVRALCGLPLGVPRQHSAAAMVNLL GELWYADGHATGAYREPDWRVLADVPGLRLHLYGKHHARPGRKMGHFTVVGEDQAAVLAQALRARGAIGVTDE >Mature_392_residues SESALSAPILPPATLGMLGGGQLGRFFVSAAHEMGYKVWVLDPDPHSPAGRIADFHLVAAYDDYAALDRVAAECAAVTTE FENVPAATLDYLAKFVPVRPGAAAVAVCQNRIEEKGFLAGNGLPHGPYAAIRSDEDLRAADAALFPAVLKVARFGYDGKG QARVADVDEALAAFHQFKGEPCVLEKLLRLDFELSVVLARDEAGAVRCFPAAENRHRRGILDVTIAPAQSAPAGLRDEAQ VVAARIAEHLGYVGTLGVEFFVCEGVLYVNEMAPRPHNSGHHTIDACDVSQYDQQVRALCGLPLGVPRQHSAAAMVNLLG ELWYADGHATGAYREPDWRVLADVPGLRLHLYGKHHARPGRKMGHFTVVGEDQAAVLAQALRARGAIGVTDE
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=364, Percent_Identity=30.2197802197802, Blast_Score=137, Evalue=9e-34, Organism=Escherichia coli, GI1788155, Length=399, Percent_Identity=27.3182957393484, Blast_Score=101, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324702, Length=382, Percent_Identity=33.2460732984293, Blast_Score=190, Evalue=4e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006115 - InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp; PF03446 NAD_binding_2 [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 42047; Mature: 41916
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESALSAPILPPATLGMLGGGQLGRFFVSAAHEMGYKVWVLDPDPHSPAGRIADFHLVA CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEE AYDDYAALDRVAAECAAVTTEFENVPAATLDYLAKFVPVRPGAAAVAVCQNRIEEKGFLA ECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEE GNGLPHGPYAAIRSDEDLRAADAALFPAVLKVARFGYDGKGQARVADVDEALAAFHQFKG CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCC EPCVLEKLLRLDFELSVVLARDEAGAVRCFPAAENRHRRGILDVTIAPAQSAPAGLRDEA CHHHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHH QVVAARIAEHLGYVGTLGVEFFVCEGVLYVNEMAPRPHNSGHHTIDACDVSQYDQQVRAL HHHHHHHHHHHCCHHHHHHEEEECCCEEEEHHCCCCCCCCCCCEEEECCHHHHHHHHHHH CGLPLGVPRQHSAAAMVNLLGELWYADGHATGAYREPDWRVLADVPGLRLHLYGKHHARP HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCC GRKMGHFTVVGEDQAAVLAQALRARGAIGVTDE CCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SESALSAPILPPATLGMLGGGQLGRFFVSAAHEMGYKVWVLDPDPHSPAGRIADFHLVA CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEE AYDDYAALDRVAAECAAVTTEFENVPAATLDYLAKFVPVRPGAAAVAVCQNRIEEKGFLA ECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEE GNGLPHGPYAAIRSDEDLRAADAALFPAVLKVARFGYDGKGQARVADVDEALAAFHQFKG CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCC EPCVLEKLLRLDFELSVVLARDEAGAVRCFPAAENRHRRGILDVTIAPAQSAPAGLRDEA CHHHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHH QVVAARIAEHLGYVGTLGVEFFVCEGVLYVNEMAPRPHNSGHHTIDACDVSQYDQQVRAL HHHHHHHHHHHCCHHHHHHEEEECCCEEEEHHCCCCCCCCCCCEEEECCHHHHHHHHHHH CGLPLGVPRQHSAAAMVNLLGELWYADGHATGAYREPDWRVLADVPGLRLHLYGKHHARP HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCC GRKMGHFTVVGEDQAAVLAQALRARGAIGVTDE CCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]