| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is aroE
Identifier: 119896998
GI number: 119896998
Start: 754859
End: 755704
Strand: Reverse
Name: aroE
Synonym: azo0707
Alternate gene names: 119896998
Gene position: 755704-754859 (Counterclockwise)
Preceding gene: 119896999
Following gene: 119896997
Centisome position: 17.27
GC content: 74.7
Gene sequence:
>846_bases ATGGACCGCTACGCCGTCGTCGGCAACCCGATCGCCCACAGCAAGTCGCCGCAGATCCACGCCGCCTTCGCGCACCAGAC CGGCGAGGCACTGGGCTACGAAGCCATCCTCGCGCCGCTCGACGGCTTCGTGGACACCGTGCTCGCGTTCCGCGCGGTGG GCGGGCGCGGCATGAACGTGACCGTGCCGTTCAAGCTCGAAGCCCACGCGCTTGCCACGCGCCTCACGCCGCGCGCGGCG GCCGCGGGCGCCGTCAATACGCTCGCCTTCGGCGGGCCGGAAACCCCGGACGACATCCTCGGCGACAACACCGACGGCGC CGGCCTGGTGCGCGACCTCACCGTCAATCTCGGCTGTCCCTTGCACGGCCGCCGCGTGCTGCTGCTCGGCGCCGGTGGCG CGGCGCGCGGCGCGCTGCTGCCGCTGCTGGAGCAGGCGCCGGCCGCGCTGACGATCGCCAACCGCACCGCGGCGAAGGCG GTGGAACTGGCCGCCGGCTTTGCCGCCGGCCACCCCGGCGTGGCGATTGACGGCGGCGGCTTCGATGCGCTCGCCGGCCG CCGCTTCGACGTGGTCATCAATGCCACCGCCGCCAGCCTTGCCGACCAGGCGCCGCCGCTGCCGGCTGGCATCTACGCCG AAGGCGCGCTGGCCTACGACATGATGTACGGCCGCGGCGACACCCCCTTTCTTGCAGCCGCCCGGGCCGACGGTGCCGGG CGGCTGGCCGACGGGCTGGGCATGCTGGTCGAGCAGGCCGCCGAGAGCTTCCTGCTGTGGCGCGGCGTGCGCCCCGACAC CGCCCCGGTGCTGGCCGATCTGCGCGCCCGTCTCGCCGCCGCATGA
Upstream 100 bases:
>100_bases CCGCCGGACATCAGCCGCGACACCGATATCATCGAGATCGTGCGGACCTGGACCTTCACCAATACCGACCAGGTGCGCGC CAACTAGGAGCCCGCAGCGC
Downstream 100 bases:
>100_bases AGACGCTGTGGCGCTGGCTCGGCCGCGCCCTGCTCGCCGCCTTCGCGCTGTTGCTGCTCTGGCAGGTCTGGCTGTTCGCG CAGGTGGCGTGGTGGCGCAC
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MDRYAVVGNPIAHSKSPQIHAAFAHQTGEALGYEAILAPLDGFVDTVLAFRAVGGRGMNVTVPFKLEAHALATRLTPRAA AAGAVNTLAFGGPETPDDILGDNTDGAGLVRDLTVNLGCPLHGRRVLLLGAGGAARGALLPLLEQAPAALTIANRTAAKA VELAAGFAAGHPGVAIDGGGFDALAGRRFDVVINATAASLADQAPPLPAGIYAEGALAYDMMYGRGDTPFLAAARADGAG RLADGLGMLVEQAAESFLLWRGVRPDTAPVLADLRARLAAA
Sequences:
>Translated_281_residues MDRYAVVGNPIAHSKSPQIHAAFAHQTGEALGYEAILAPLDGFVDTVLAFRAVGGRGMNVTVPFKLEAHALATRLTPRAA AAGAVNTLAFGGPETPDDILGDNTDGAGLVRDLTVNLGCPLHGRRVLLLGAGGAARGALLPLLEQAPAALTIANRTAAKA VELAAGFAAGHPGVAIDGGGFDALAGRRFDVVINATAASLADQAPPLPAGIYAEGALAYDMMYGRGDTPFLAAARADGAG RLADGLGMLVEQAAESFLLWRGVRPDTAPVLADLRARLAAA >Mature_281_residues MDRYAVVGNPIAHSKSPQIHAAFAHQTGEALGYEAILAPLDGFVDTVLAFRAVGGRGMNVTVPFKLEAHALATRLTPRAA AAGAVNTLAFGGPETPDDILGDNTDGAGLVRDLTVNLGCPLHGRRVLLLGAGGAARGALLPLLEQAPAALTIANRTAAKA VELAAGFAAGHPGVAIDGGGFDALAGRRFDVVINATAASLADQAPPLPAGIYAEGALAYDMMYGRGDTPFLAAARADGAG RLADGLGMLVEQAAESFLLWRGVRPDTAPVLADLRARLAAA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1789675, Length=281, Percent_Identity=51.6014234875445, Blast_Score=251, Evalue=5e-68, Organism=Escherichia coli, GI1787983, Length=282, Percent_Identity=30.1418439716312, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320332, Length=274, Percent_Identity=27.3722627737226, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROE_AZOSB (A1K3B9)
Other databases:
- EMBL: AM406670 - RefSeq: YP_932211.1 - ProteinModelPortal: A1K3B9 - SMR: A1K3B9 - STRING: A1K3B9 - GeneID: 4609282 - GenomeReviews: AM406670_GR - KEGG: azo:azo0707 - eggNOG: COG0169 - HOGENOM: HBG553408 - OMA: DQYVVFG - PhylomeDB: A1K3B9 - ProtClustDB: PRK00258 - BioCyc: ASP62928:AZO0707-MONOMER - GO: GO:0005737 - HAMAP: MF_00222 - InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR00507
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N
EC number: =1.1.1.25
Molecular weight: Translated: 28497; Mature: 28497
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: ACT_SITE 65-65
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRYAVVGNPIAHSKSPQIHAAFAHQTGEALGYEAILAPLDGFVDTVLAFRAVGGRGMNV CCCEEEECCCCCCCCCCCEEEEEHHHCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEE TVPFKLEAHALATRLTPRAAAAGAVNTLAFGGPETPDDILGDNTDGAGLVRDLTVNLGCP EEEEEECHHHHHHHCCCHHHHCCCHHHEECCCCCCCHHHCCCCCCCCCEEEEEEEECCCC LHGRRVLLLGAGGAARGALLPLLEQAPAALTIANRTAAKAVELAAGFAAGHPGVAIDGGG CCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEECCC FDALAGRRFDVVINATAASLADQAPPLPAGIYAEGALAYDMMYGRGDTPFLAAARADGAG CHHHCCCEEEEEEECHHHHHHHCCCCCCCCCEECCCEEEEEEECCCCCCEEEEECCCCCC RLADGLGMLVEQAAESFLLWRGVRPDTAPVLADLRARLAAA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDRYAVVGNPIAHSKSPQIHAAFAHQTGEALGYEAILAPLDGFVDTVLAFRAVGGRGMNV CCCEEEECCCCCCCCCCCEEEEEHHHCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEE TVPFKLEAHALATRLTPRAAAAGAVNTLAFGGPETPDDILGDNTDGAGLVRDLTVNLGCP EEEEEECHHHHHHHCCCHHHHCCCHHHEECCCCCCCHHHCCCCCCCCCEEEEEEEECCCC LHGRRVLLLGAGGAARGALLPLLEQAPAALTIANRTAAKAVELAAGFAAGHPGVAIDGGG CCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEECCC FDALAGRRFDVVINATAASLADQAPPLPAGIYAEGALAYDMMYGRGDTPFLAAARADGAG CHHHCCCEEEEEEECHHHHHHHCCCCCCCCCEECCCEEEEEEECCCCCCEEEEECCCCCC RLADGLGMLVEQAAESFLLWRGVRPDTAPVLADLRARLAAA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA