| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119896999
Identifier: 119896999
GI number: 119896999
Start: 755718
End: 756620
Strand: Reverse
Name: 119896999
Synonym: azo0708
Alternate gene names: NA
Gene position: 756620-755718 (Counterclockwise)
Preceding gene: 119897000
Following gene: 119896998
Centisome position: 17.29
GC content: 71.43
Gene sequence:
>903_bases ATGTCGCCGACCCTCCCTCCCACCCGCCGCGCCGGCCGCTCCGCCACGCTGGGCGCGATCGCGCGCGGCACGCCGCTGCT GGTGCTCGCGTTCGCGCTGTCGGGGCTGCTGCACGCCACCCTGCTGGCGGTCCATTTCGTGTCGCCGCCGCCCAAGCCCA CGCGTGACCGCGGTCTTGAAGTGGTGCTGGTCAACGCCCGCCACGCCAGGGCGCCCGACCAGGCCCAGGTGCTGGCGCAA GCCAATCTCGACGGCGGCGGCACCAGCGACAAGGCGGTCACGCCCAAGTCGCCGCTGCCGCCGCAGGACGCGCGCCGCGA GGGCACCGCGCTGACCGAGGCGCGGCGCAAGGTGCAGCAGCAGGAGCGCACGCAGCAGGAACTGCTCACGCGCGTGAAGC AGGCGCCCGCGGTGGCGAGCACGCGCGAACATGCCGAACAGCCCGCGCCCACGCCGCAGGCCTCCGGGCTGGACCTGCTC GACAGCGCGGCGGCGATCGCCCGCATCGAAGCGCAGATCGACCGCAACCTGGAGGAATACGCCAAGCGCCCGCGCAAGAA ATTCATCGGCGCGCGCGCGCGCGAGTACCGCTTCGCCCAGTACGTGGAGGACTGGCGCCTGAAGATCGAGCGCATCGGCA CCCTCAACTACCCAGACGCCGCACGCGGCAAGCTCTACGGCAGCCTGCTGCTGTCGGTGTCGATCCGCGCCGACGGCAGC GTGGCGAGCGTGGAAGTCACCCGCAGCTCGGGCCACAAGGTGCTGGACGAAGCGGCGATGCGCATCGTCAACATGTCGGC GCCCTACGCCCCCTTCCCGCCGGACATCAGCCGCGACACCGATATCATCGAGATCGTGCGGACCTGGACCTTCACCAATA CCGACCAGGTGCGCGCCAACTAG
Upstream 100 bases:
>100_bases GCAGATCCTGTCCGAACCCGACCCGGAAGACTATGCCGAATTCGAAGGCCCGTGAGCACGGCGCACCGCGCTGAACACAG GCCGAGCGAATAACAAAACC
Downstream 100 bases:
>100_bases GAGCCCGCAGCGCATGGACCGCTACGCCGTCGTCGGCAACCCGATCGCCCACAGCAAGTCGCCGCAGATCCACGCCGCCT TCGCGCACCAGACCGGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NB Protein; NB-Like Protein; NB Family C-Terminal Domain Protein; NB-Like; NB C-Terminal; NB Domain-Containing Protein; Periplasmic Protein nB Links Inner And Outer Membranes; NB-Related Transmembrane Protein; GETHR Pentapeptide; Nb Family Protein; NB Domain Protein; NB-Like Domain-Containing Protein; Periplasmic Protein/ Biopolymer Transport; NB-Dependent Receptor; NB Family C-Terminal Domain-Containing; Nb Protein
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSPTLPPTRRAGRSATLGAIARGTPLLVLAFALSGLLHATLLAVHFVSPPPKPTRDRGLEVVLVNARHARAPDQAQVLAQ ANLDGGGTSDKAVTPKSPLPPQDARREGTALTEARRKVQQQERTQQELLTRVKQAPAVASTREHAEQPAPTPQASGLDLL DSAAAIARIEAQIDRNLEEYAKRPRKKFIGARAREYRFAQYVEDWRLKIERIGTLNYPDAARGKLYGSLLLSVSIRADGS VASVEVTRSSGHKVLDEAAMRIVNMSAPYAPFPPDISRDTDIIEIVRTWTFTNTDQVRAN
Sequences:
>Translated_300_residues MSPTLPPTRRAGRSATLGAIARGTPLLVLAFALSGLLHATLLAVHFVSPPPKPTRDRGLEVVLVNARHARAPDQAQVLAQ ANLDGGGTSDKAVTPKSPLPPQDARREGTALTEARRKVQQQERTQQELLTRVKQAPAVASTREHAEQPAPTPQASGLDLL DSAAAIARIEAQIDRNLEEYAKRPRKKFIGARAREYRFAQYVEDWRLKIERIGTLNYPDAARGKLYGSLLLSVSIRADGS VASVEVTRSSGHKVLDEAAMRIVNMSAPYAPFPPDISRDTDIIEIVRTWTFTNTDQVRAN >Mature_299_residues SPTLPPTRRAGRSATLGAIARGTPLLVLAFALSGLLHATLLAVHFVSPPPKPTRDRGLEVVLVNARHARAPDQAQVLAQA NLDGGGTSDKAVTPKSPLPPQDARREGTALTEARRKVQQQERTQQELLTRVKQAPAVASTREHAEQPAPTPQASGLDLLD SAAAIARIEAQIDRNLEEYAKRPRKKFIGARAREYRFAQYVEDWRLKIERIGTLNYPDAARGKLYGSLLLSVSIRADGSV ASVEVTRSSGHKVLDEAAMRIVNMSAPYAPFPPDISRDTDIIEIVRTWTFTNTDQVRAN
Specific function: Unknown
COG id: COG0810
COG function: function code M; Periplasmic protein TonB, links inner and outer membranes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32770; Mature: 32638
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTLPPTRRAGRSATLGAIARGTPLLVLAFALSGLLHATLLAVHFVSPPPKPTRDRGLE CCCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE VVLVNARHARAPDQAQVLAQANLDGGGTSDKAVTPKSPLPPQDARREGTALTEARRKVQQ EEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH QERTQQELLTRVKQAPAVASTREHAEQPAPTPQASGLDLLDSAAAIARIEAQIDRNLEEY HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH AKRPRKKFIGARAREYRFAQYVEDWRLKIERIGTLNYPDAARGKLYGSLLLSVSIRADGS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEEEEEECCCC VASVEVTRSSGHKVLDEAAMRIVNMSAPYAPFPPDISRDTDIIEIVRTWTFTNTDQVRAN EEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SPTLPPTRRAGRSATLGAIARGTPLLVLAFALSGLLHATLLAVHFVSPPPKPTRDRGLE CCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE VVLVNARHARAPDQAQVLAQANLDGGGTSDKAVTPKSPLPPQDARREGTALTEARRKVQQ EEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH QERTQQELLTRVKQAPAVASTREHAEQPAPTPQASGLDLLDSAAAIARIEAQIDRNLEEY HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH AKRPRKKFIGARAREYRFAQYVEDWRLKIERIGTLNYPDAARGKLYGSLLLSVSIRADGS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEEEEEECCCC VASVEVTRSSGHKVLDEAAMRIVNMSAPYAPFPPDISRDTDIIEIVRTWTFTNTDQVRAN EEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA