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The map label for this gene is urtC [H]

Identifier: 119896967

GI number: 119896967

Start: 712360

End: 713553

Strand: Direct

Name: urtC [H]

Synonym: azo0676

Alternate gene names: 119896967

Gene position: 712360-713553 (Clockwise)

Preceding gene: 119896966

Following gene: 119896968

Centisome position: 16.28

GC content: 67.42

Gene sequence:

>1194_bases
ATGCGCACCCCATTCACCGTAAGACTGTTCCAGAGCATGCCGAAGACCGGCTGGGTCGCGCTCGCGATCTTCGCCGTCGT
CGCCTGCGTCGGCGTGCCCGTCGCCCACCTCGCACTGCCGGAGGGCCATGCGCTGCACCTGTCGGCCTACACCGTCAGCC
TGCTCGGCAAGATCCTGTGCTACATGGTGGTGGCGGTGGCGATGGACCTGATCTGGGGCTACGCCGGCATCCTCAGCCTC
GGCCACGGCCTCTTCTTCGCCCTCGGCGGCTACGCCTTCGGCATGTATCTGATGCGCCAGATCGGCCGCGACGGCAGCTA
CCAGAGCGACCTGCCGGACTTCATGGTCTTCCTCGACTGGAAGGAACTGCCCTGGTACTGGGCGGGGTCCGACTCCTTCC
TGTGGGCGCTCTTCCTCGCCATGGCGCTGCCCGGCCTGGTCGCCTTCGTGTTCGGCTACTTCGCCTTCCGCTCGCGCATC
AAGGGTGTGTACTTCTCCATCATCACCCAGGCGCTCACCTACGCCGCGATGCTGCTGTTCTTCCGCAACGAGACCGGCTT
CGGCGGCAACAACGGCTTCACCGACTTCAAGCGCATCCTCGGCTACAGCATCACCTCACCGGAAATGCGGGCGACGCTGT
TCGCGCTCTCCGCGCTGCTGCTGATCGCCTGCCTGGTGCTCGGCCGCTACCTCGTTTCCTCGCGCTTCGGCCGCGTGCTC
GCCGCCATCCGCGATGCCGAGAGCCGGGTCATGTTCATCGGCTACAACCCGCTGCACTACAAGCTCTTCATGTGGACGCT
GTCGGCGGTGCTGTGCGGCCTGGCGGGCGCGCTCTACGTGCCGCAGGTGGGCATCATCAACCCCTCGGAAATGAGCCCGG
CCAACTCGATCGAGATTGCGGTGTGGGTGGCCGTGGGCGGCCGCGGCACGCTGGTGGGCGCGGTGCTCGGCGCCGGCATC
GTCAATCTGGCCAAGAGCTTCTTCACCGTCACCGTGCCGGAATACTGGCCCTTCTTCCTCGGCTTCCTCTTCATCGCGGT
CACGCTCTACCTGCCGGACGGCGTGGTCGGCCTGTGGCGCAAGCTGCGCGCCCGCAAGGGCCCCGACAGCGCGGCAGCGG
CGCCGGCCGCGACCGCAGCGCCCGTGGGTGAAGCCGCGCCCGAAACCACCGTCGCCAAGGGAGCCACGGCATGA

Upstream 100 bases:

>100_bases
CGCGGAGCGAACACCCCGGCCGGCGCGCCTCGCAAGCCGCGAGACCTGCAGCACCGAAGGTGTGACGAAAGCCATTCAAG
CAAAAGGAGGCGCCCCCCAA

Downstream 100 bases:

>100_bases
CCGAAACCACCGAACTGGAACGCCGCGCGCGCGCCTTCGCCGAAGCGGGCGGGCGCGAGAACTGGGAGGGCGCCGCCGCC
ACCGGCCACGTCGCCACCGG

Product: ABC transporter membrane protein

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein M [H]

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MRTPFTVRLFQSMPKTGWVALAIFAVVACVGVPVAHLALPEGHALHLSAYTVSLLGKILCYMVVAVAMDLIWGYAGILSL
GHGLFFALGGYAFGMYLMRQIGRDGSYQSDLPDFMVFLDWKELPWYWAGSDSFLWALFLAMALPGLVAFVFGYFAFRSRI
KGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGYSITSPEMRATLFALSALLLIACLVLGRYLVSSRFGRVL
AAIRDAESRVMFIGYNPLHYKLFMWTLSAVLCGLAGALYVPQVGIINPSEMSPANSIEIAVWVAVGGRGTLVGAVLGAGI
VNLAKSFFTVTVPEYWPFFLGFLFIAVTLYLPDGVVGLWRKLRARKGPDSAAAAPAATAAPVGEAAPETTVAKGATA

Sequences:

>Translated_397_residues
MRTPFTVRLFQSMPKTGWVALAIFAVVACVGVPVAHLALPEGHALHLSAYTVSLLGKILCYMVVAVAMDLIWGYAGILSL
GHGLFFALGGYAFGMYLMRQIGRDGSYQSDLPDFMVFLDWKELPWYWAGSDSFLWALFLAMALPGLVAFVFGYFAFRSRI
KGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGYSITSPEMRATLFALSALLLIACLVLGRYLVSSRFGRVL
AAIRDAESRVMFIGYNPLHYKLFMWTLSAVLCGLAGALYVPQVGIINPSEMSPANSIEIAVWVAVGGRGTLVGAVLGAGI
VNLAKSFFTVTVPEYWPFFLGFLFIAVTLYLPDGVVGLWRKLRARKGPDSAAAAPAATAAPVGEAAPETTVAKGATA
>Mature_397_residues
MRTPFTVRLFQSMPKTGWVALAIFAVVACVGVPVAHLALPEGHALHLSAYTVSLLGKILCYMVVAVAMDLIWGYAGILSL
GHGLFFALGGYAFGMYLMRQIGRDGSYQSDLPDFMVFLDWKELPWYWAGSDSFLWALFLAMALPGLVAFVFGYFAFRSRI
KGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGYSITSPEMRATLFALSALLLIACLVLGRYLVSSRFGRVL
AAIRDAESRVMFIGYNPLHYKLFMWTLSAVLCGLAGALYVPQVGIINPSEMSPANSIEIAVWVAVGGRGTLVGAVLGAGI
VNLAKSFFTVTVPEYWPFFLGFLFIAVTLYLPDGVVGLWRKLRARKGPDSAAAAPAATAAPVGEAAPETTVAKGATA

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789865, Length=352, Percent_Identity=22.7272727272727, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR021807 [H]

Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]

EC number: NA

Molecular weight: Translated: 42970; Mature: 42970

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2195019; 8041620; 9278503 [H]