Click here to switch to the map view.

The map label for this gene is ybgL [C]

Identifier: 119896335

GI number: 119896335

Start: 48804

End: 49574

Strand: Reverse

Name: ybgL [C]

Synonym: azo0043

Alternate gene names: 119896335

Gene position: 49574-48804 (Counterclockwise)

Preceding gene: 119896336

Following gene: 119896332

Centisome position: 1.13

GC content: 70.17

Gene sequence:

>771_bases
ATGATGAAGATCAACCTCAACGCCGACCTCGGCGAATCCTTCGGCGCCTGGAAGATGGGCGAGGACGACGCGCTGCTGCA
GGTGGTGCGCTCGGCCAACATCGCCTGCGGCTTCCATGCCGGCGATCCGCTGGTGATGCGCAACACGGTGCGGATGGCGC
TCGCCGCCGGCGTCAGCCTGGGCGCCCATCCGGCCTATCCCGACCTGCAGGGCTTCGGCCGTCGGCCGATGAAGATGGCA
CCGGCCGAACTGGAAGCGGCGGTGATCTACCAGCTCGGCGCGCTCGCCGGCATCGCCGCCGCCGAAGGCGGCCGGCTGAG
CCATGTGAAGCCGCACGGTGCGCTCAGCAACCAAGCCTGCGAGGACGCCGAACTCGCCGCCACCGTGGTGCGCGCGGTGC
GTGCCTTCGACCGCGAGCTGATCCTGCTGGCCCCGGCCTTATCCGAACTGCACGCCGTCGGCGAGCGTGCCGGGCTGCGG
GTAGCGGCAGAGATCTTTGCCGACCGCGCCTATACCGACGCCGCCACGCTCGCTGCGCGCACCCAGCCGGGCGCGGTGAT
CCACGACCACGACGAGATCATCGCCCACGTGCTGCGGATGCTGGACGCGGGCGGCATCGTCGCGCAGAGCGGCAAGGTGA
TGAAGACGGTGATGCACAGCGTCTGCGTGCATGGCGACACCCCCGGCGCGGTGCAGAGCGCGCGGCGACTGGCGGAGACC
TTGGCAGCGAAGGGGTGGGAGTTGGTGGGCCTGCCGGAGATGGGGGAATGA

Upstream 100 bases:

>100_bases
CCAACCTGGTGAGCGGCGTGGTGCACGCGCTCGCCGCCGAATATCGCCCACTCACCGCTGCCGCTGACCAGGCCGCTGCG
CCAACGCCTCCGGAACCACG

Downstream 100 bases:

>100_bases
GTGGTGCGGTCCCCGCCTCTTCAGCGGCCGAGGCGAGGGGCTGAGCGGTCCGCTGAGGTGTAGCCAACGCCAGGGGGCAG
GAGGAGGCGCGAGCGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MMKINLNADLGESFGAWKMGEDDALLQVVRSANIACGFHAGDPLVMRNTVRMALAAGVSLGAHPAYPDLQGFGRRPMKMA
PAELEAAVIYQLGALAGIAAAEGGRLSHVKPHGALSNQACEDAELAATVVRAVRAFDRELILLAPALSELHAVGERAGLR
VAAEIFADRAYTDAATLAARTQPGAVIHDHDEIIAHVLRMLDAGGIVAQSGKVMKTVMHSVCVHGDTPGAVQSARRLAET
LAAKGWELVGLPEMGE

Sequences:

>Translated_256_residues
MMKINLNADLGESFGAWKMGEDDALLQVVRSANIACGFHAGDPLVMRNTVRMALAAGVSLGAHPAYPDLQGFGRRPMKMA
PAELEAAVIYQLGALAGIAAAEGGRLSHVKPHGALSNQACEDAELAATVVRAVRAFDRELILLAPALSELHAVGERAGLR
VAAEIFADRAYTDAATLAARTQPGAVIHDHDEIIAHVLRMLDAGGIVAQSGKVMKTVMHSVCVHGDTPGAVQSARRLAET
LAAKGWELVGLPEMGE
>Mature_256_residues
MMKINLNADLGESFGAWKMGEDDALLQVVRSANIACGFHAGDPLVMRNTVRMALAAGVSLGAHPAYPDLQGFGRRPMKMA
PAELEAAVIYQLGALAGIAAAEGGRLSHVKPHGALSNQACEDAELAATVVRAVRAFDRELILLAPALSELHAVGERAGLR
VAAEIFADRAYTDAATLAARTQPGAVIHDHDEIIAHVLRMLDAGGIVAQSGKVMKTVMHSVCVHGDTPGAVQSARRLAET
LAAKGWELVGLPEMGE

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=46.3114754098361, Blast_Score=210, Evalue=8e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y043_AZOSB (A1K1F6)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_931548.1
- ProteinModelPortal:   A1K1F6
- SMR:   A1K1F6
- STRING:   A1K1F6
- GeneID:   4606175
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo0043
- eggNOG:   COG1540
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- PhylomeDB:   A1K1F6
- ProtClustDB:   CLSK2487317
- BioCyc:   ASP62928:AZO0043-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26836; Mature: 26836

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKINLNADLGESFGAWKMGEDDALLQVVRSANIACGFHAGDPLVMRNTVRMALAAGVSL
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCC
GAHPAYPDLQGFGRRPMKMAPAELEAAVIYQLGALAGIAAAEGGRLSHVKPHGALSNQAC
CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
EDAELAATVVRAVRAFDRELILLAPALSELHAVGERAGLRVAAEIFADRAYTDAATLAAR
CHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
TQPGAVIHDHDEIIAHVLRMLDAGGIVAQSGKVMKTVMHSVCVHGDTPGAVQSARRLAET
CCCCCEEECHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LAAKGWELVGLPEMGE
HHHCCCEEECCCCCCC
>Mature Secondary Structure
MMKINLNADLGESFGAWKMGEDDALLQVVRSANIACGFHAGDPLVMRNTVRMALAAGVSL
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCC
GAHPAYPDLQGFGRRPMKMAPAELEAAVIYQLGALAGIAAAEGGRLSHVKPHGALSNQAC
CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
EDAELAATVVRAVRAFDRELILLAPALSELHAVGERAGLRVAAEIFADRAYTDAATLAAR
CHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
TQPGAVIHDHDEIIAHVLRMLDAGGIVAQSGKVMKTVMHSVCVHGDTPGAVQSARRLAET
CCCCCEEECHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LAAKGWELVGLPEMGE
HHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA