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The map label for this gene is ybgK [H]

Identifier: 119896336

GI number: 119896336

Start: 49571

End: 50671

Strand: Reverse

Name: ybgK [H]

Synonym: azo0044

Alternate gene names: 119896336

Gene position: 50671-49571 (Counterclockwise)

Preceding gene: 119896337

Following gene: 119896335

Centisome position: 1.16

GC content: 74.57

Gene sequence:

>1101_bases
ATGAGCGCGGTGCAGCTCGAAGTGCTCGCGCCCGGCGCCTACGCCTCGCTGCAGGACGGCGGGCGGCGTGGCTATCGGCG
TATCGGCGTGCCCTGGGCGGGTGTGCTCGACACCCGCCTGATGCGGATCGCCAATGTGCTCGTCGGCAATGCCGAGGGTG
CGCCGGTGATCGAGTGCTTCGACGGCGGCCTGCTGCTCGCCGCGCGCGGCGGACCGCTGCGGCTCGCGGTGGCCGGGGAC
GCGGTGCTGGAGATCGAGCGCGGCGGCGAACGCAGTGCGCTGGCGCCGTGGCGTTCGCTGACGCTGGGCGACGGCGAGCT
GCTGCGGCTGCGCCGCATGAGCGGTGGGCGCATCGCCGTGGTTGCGGTGGAAGGCTTGGTGCTGACTCCGGTGCTCGGCA
GCGTTTCCACCTACGCGCGCGCCGGGCTGGGCGGCCTGGACGGGCCGCTCGCCGGGCGGGCGCTGACCACCGGGATGCTG
CTGCCGGCGCAGGCGGCACGCGCCGATGGGGAACGCATGCTGCCCCTTCCGCCGCAGGTGGACGAGGGCCCGATCCGCGT
CGTGCCGGGCCCGCAGGCGGATCACTTCAGCGCCGCCGCGTTCGCCACCCTGCTGGGCGAGGAATACCGCGTCAGCGCCG
AAGCCGACCGCATGGGCCTGCGGCTGGAAGGTCCGGCGCTGGAACATGCCGGTGCGCGCGAGATCGTTTCCGACGCCACC
GTGCCGGGCGCGATCCAGGTGCCCGGCAACGGCCAGCCCATCGTGCTGCTGGCCGATGCGCAGACGGCGGGCGGCTACCC
CAAGATCGCCACCGTGATCGGCGCCGACCTTGGCCGCCTGGCCGCGCTGCGGCCGGGGCAGGTGCTGCGCTTTGCCACGG
TGACGGCCGGGGAAGGCGAACACCTTGCCCGTGCCGCCGAGGCCGGAACCCGCGCGCTACTCGCCGGCGTGCGTCCGCTG
GCCGCCGACGGCATCGACCTCGCCGCGCTGCAGGCGGCCAACCTGGTGAGCGGCGTGGTGCACGCGCTCGCCGCCGAATA
TCGCCCACTCACCGCTGCCGCTGACCAGGCCGCTGCGCCAACGCCTCCGGAACCACGATGA

Upstream 100 bases:

>100_bases
TGCAGGGCGGCGAAATCGACCCGCAGGAATGGCTGTGTTCCGGCGTGGCCGAGGGGGACGGAACCGCGGCCCCTTCGGCC
GCGCCGGAGGGTGGGGCGCG

Downstream 100 bases:

>100_bases
TGAAGATCAACCTCAACGCCGACCTCGGCGAATCCTTCGGCGCCTGGAAGATGGGCGAGGACGACGCGCTGCTGCAGGTG
GTGCGCTCGGCCAACATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSAVQLEVLAPGAYASLQDGGRRGYRRIGVPWAGVLDTRLMRIANVLVGNAEGAPVIECFDGGLLLAARGGPLRLAVAGD
AVLEIERGGERSALAPWRSLTLGDGELLRLRRMSGGRIAVVAVEGLVLTPVLGSVSTYARAGLGGLDGPLAGRALTTGML
LPAQAARADGERMLPLPPQVDEGPIRVVPGPQADHFSAAAFATLLGEEYRVSAEADRMGLRLEGPALEHAGAREIVSDAT
VPGAIQVPGNGQPIVLLADAQTAGGYPKIATVIGADLGRLAALRPGQVLRFATVTAGEGEHLARAAEAGTRALLAGVRPL
AADGIDLAALQAANLVSGVVHALAAEYRPLTAAADQAAAPTPPEPR

Sequences:

>Translated_366_residues
MSAVQLEVLAPGAYASLQDGGRRGYRRIGVPWAGVLDTRLMRIANVLVGNAEGAPVIECFDGGLLLAARGGPLRLAVAGD
AVLEIERGGERSALAPWRSLTLGDGELLRLRRMSGGRIAVVAVEGLVLTPVLGSVSTYARAGLGGLDGPLAGRALTTGML
LPAQAARADGERMLPLPPQVDEGPIRVVPGPQADHFSAAAFATLLGEEYRVSAEADRMGLRLEGPALEHAGAREIVSDAT
VPGAIQVPGNGQPIVLLADAQTAGGYPKIATVIGADLGRLAALRPGQVLRFATVTAGEGEHLARAAEAGTRALLAGVRPL
AADGIDLAALQAANLVSGVVHALAAEYRPLTAAADQAAAPTPPEPR
>Mature_365_residues
SAVQLEVLAPGAYASLQDGGRRGYRRIGVPWAGVLDTRLMRIANVLVGNAEGAPVIECFDGGLLLAARGGPLRLAVAGDA
VLEIERGGERSALAPWRSLTLGDGELLRLRRMSGGRIAVVAVEGLVLTPVLGSVSTYARAGLGGLDGPLAGRALTTGMLL
PAQAARADGERMLPLPPQVDEGPIRVVPGPQADHFSAAAFATLLGEEYRVSAEADRMGLRLEGPALEHAGAREIVSDATV
PGAIQVPGNGQPIVLLADAQTAGGYPKIATVIGADLGRLAALRPGQVLRFATVTAGEGEHLARAAEAGTRALLAGVRPLA
ADGIDLAALQAANLVSGVVHALAAEYRPLTAAADQAAAPTPPEPR

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=295, Percent_Identity=36.9491525423729, Blast_Score=171, Evalue=8e-44,
Organism=Saccharomyces cerevisiae, GI6319685, Length=331, Percent_Identity=27.190332326284, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 37319; Mature: 37188

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVQLEVLAPGAYASLQDGGRRGYRRIGVPWAGVLDTRLMRIANVLVGNAEGAPVIECF
CCCEEEEEECCCCCHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE
DGGLLLAARGGPLRLAVAGDAVLEIERGGERSALAPWRSLTLGDGELLRLRRMSGGRIAV
CCCEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEE
VAVEGLVLTPVLGSVSTYARAGLGGLDGPLAGRALTTGMLLPAQAARADGERMLPLPPQV
EEECCEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHCEECCCHHHHCCCCCCCCCCCCC
DEGPIRVVPGPQADHFSAAAFATLLGEEYRVSAEADRMGLRLEGPALEHAGAREIVSDAT
CCCCEEEECCCCCCCHHHHHHHHHHCCCEEEECCHHHCCEEECCCCCCCCCHHHHHHCCC
VPGAIQVPGNGQPIVLLADAQTAGGYPKIATVIGADLGRLAALRPGQVLRFATVTAGEGE
CCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCHHHHHCCCCCCEEEEEEEECCCCH
HLARAAEAGTRALLAGVRPLAADGIDLAALQAANLVSGVVHALAAEYRPLTAAADQAAAP
HHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC
TPPEPR
CCCCCC
>Mature Secondary Structure 
SAVQLEVLAPGAYASLQDGGRRGYRRIGVPWAGVLDTRLMRIANVLVGNAEGAPVIECF
CCEEEEEECCCCCHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE
DGGLLLAARGGPLRLAVAGDAVLEIERGGERSALAPWRSLTLGDGELLRLRRMSGGRIAV
CCCEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEE
VAVEGLVLTPVLGSVSTYARAGLGGLDGPLAGRALTTGMLLPAQAARADGERMLPLPPQV
EEECCEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHCEECCCHHHHCCCCCCCCCCCCC
DEGPIRVVPGPQADHFSAAAFATLLGEEYRVSAEADRMGLRLEGPALEHAGAREIVSDAT
CCCCEEEECCCCCCCHHHHHHHHHHCCCEEEECCHHHCCEEECCCCCCCCCHHHHHHCCC
VPGAIQVPGNGQPIVLLADAQTAGGYPKIATVIGADLGRLAALRPGQVLRFATVTAGEGE
CCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCHHHHHCCCCCCEEEEEEEECCCCH
HLARAAEAGTRALLAGVRPLAADGIDLAALQAANLVSGVVHALAAEYRPLTAAADQAAAP
HHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC
TPPEPR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]