Click here to switch to the map view.

The map label for this gene is yhgN [H]

Identifier: 119776758

GI number: 119776758

Start: 4268462

End: 4269058

Strand: Reverse

Name: yhgN [H]

Synonym: Sama_3626

Alternate gene names: 119776758

Gene position: 4269058-4268462 (Counterclockwise)

Preceding gene: 119776759

Following gene: 119776757

Centisome position: 99.14

GC content: 49.75

Gene sequence:

>597_bases
ATGGATATTTTTTCCGCCGCCGTAATGTTGTTTTTGATTATGGATCCTCTGGGCAATCTGCCCATATTTGCCTCTATTTT
GCGGCATATTGATCCTAAAAAACGTCGTAAGGTGTTGATCCGTGAGCTGCTGTTTGCGCTCGTCATCATGCTGATGTTCC
TGTTTGCCGGTGAAGCCATACTCAATTTCCTTAATCTGCGCTCCGAATCTGTGAGTATCGCCGGGGGCATCATTCTGTTT
CTGATTGCCATTAAGATGATTTTCCCAAGTCCGGGAGGCGTAACAGGTCTGCCGGCAGGGGAAGAGCCTTTTATCGTGCC
CATGGCGATTCCATTGATGGCCGGCCCTTCGATTCTGGCGGCATTGATCCTGCTGGCCCATACCGACAGCAGCCGTATGT
TGGACTGGACCATAGCCCTGGTGTCTGCCTGGGGGGTAAGCGCCTTTATTTTGATGTTTTATAAAGGCTTTACCCGGATA
CTCGGTGAAAAAGGCTTAACCGCCGTTGAGCGTTTGATGGGCATGGTGCTGGTAATGATTTCGGTGCAGATGTTCCTCGA
TGGCGTGGCCAACTACCTCAATAAATCGGTCAGTTAA

Upstream 100 bases:

>100_bases
ATATCAGACAAGGCTAATCATTCGTAAACTTGCATTTCGCTGTCGCTATAATAGCTATTACAATGGCCTCCAAGTTGGTA
TTTTTCGATAACTAATTGCT

Downstream 100 bases:

>100_bases
AACCCTTCCTTGCCAGTGGCAGGTGGGAATGCGATTATTTGAATATTGTATCCAAATAAATAAAGCCTATGTATTCCTGC
CTGTTGCTTTGCGCTCTGGG

Product: multiple antibiotic resistance (MarC)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDIFSAAVMLFLIMDPLGNLPIFASILRHIDPKKRRKVLIRELLFALVIMLMFLFAGEAILNFLNLRSESVSIAGGIILF
LIAIKMIFPSPGGVTGLPAGEEPFIVPMAIPLMAGPSILAALILLAHTDSSRMLDWTIALVSAWGVSAFILMFYKGFTRI
LGEKGLTAVERLMGMVLVMISVQMFLDGVANYLNKSVS

Sequences:

>Translated_198_residues
MDIFSAAVMLFLIMDPLGNLPIFASILRHIDPKKRRKVLIRELLFALVIMLMFLFAGEAILNFLNLRSESVSIAGGIILF
LIAIKMIFPSPGGVTGLPAGEEPFIVPMAIPLMAGPSILAALILLAHTDSSRMLDWTIALVSAWGVSAFILMFYKGFTRI
LGEKGLTAVERLMGMVLVMISVQMFLDGVANYLNKSVS
>Mature_198_residues
MDIFSAAVMLFLIMDPLGNLPIFASILRHIDPKKRRKVLIRELLFALVIMLMFLFAGEAILNFLNLRSESVSIAGGIILF
LIAIKMIFPSPGGVTGLPAGEEPFIVPMAIPLMAGPSILAALILLAHTDSSRMLDWTIALVSAWGVSAFILMFYKGFTRI
LGEKGLTAVERLMGMVLVMISVQMFLDGVANYLNKSVS

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1789842, Length=194, Percent_Identity=63.4020618556701, Blast_Score=241, Evalue=2e-65,
Organism=Escherichia coli, GI1787809, Length=198, Percent_Identity=26.2626262626263, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1787494, Length=193, Percent_Identity=25.9067357512953, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21616; Mature: 21616

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFSAAVMLFLIMDPLGNLPIFASILRHIDPKKRRKVLIRELLFALVIMLMFLFAGEAI
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNFLNLRSESVSIAGGIILFLIAIKMIFPSPGGVTGLPAGEEPFIVPMAIPLMAGPSILA
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHCCHHHHH
ALILLAHTDSSRMLDWTIALVSAWGVSAFILMFYKGFTRILGEKGLTAVERLMGMVLVMI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SVQMFLDGVANYLNKSVS
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDIFSAAVMLFLIMDPLGNLPIFASILRHIDPKKRRKVLIRELLFALVIMLMFLFAGEAI
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNFLNLRSESVSIAGGIILFLIAIKMIFPSPGGVTGLPAGEEPFIVPMAIPLMAGPSILA
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHCCHHHHH
ALILLAHTDSSRMLDWTIALVSAWGVSAFILMFYKGFTRILGEKGLTAVERLMGMVLVMI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SVQMFLDGVANYLNKSVS
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]