Click here to switch to the map view.

The map label for this gene is ygjK [H]

Identifier: 119776757

GI number: 119776757

Start: 4266240

End: 4268393

Strand: Reverse

Name: ygjK [H]

Synonym: Sama_3625

Alternate gene names: 119776757

Gene position: 4268393-4266240 (Counterclockwise)

Preceding gene: 119776758

Following gene: 119776756

Centisome position: 99.12

GC content: 57.01

Gene sequence:

>2154_bases
ATGTATTCCTGCCTGTTGCTTTGCGCTCTGGGATTGCCCGGGGGAGATCTTCTGCCTTATCAAGGCGTGCCTGACTCTGC
CGAATCCCGCGATGCCCGCGGTAATCTGAGTATTCCTGCTGTTTATACCGATAGGGGCGCCTGGCACGGCTTTCATCTGC
CAGACGAGCGCCACGCAGGAAGTTTTCCCGGCCCGCTGATTATCGCACAGGAATACAGCCTGCATCTGTCGGCCGCCATG
GAGGCAGTCAGCATTGGGCGGGACGAAAAGCCCTTGGAGCAGGCTGAGTTGCAAACACAGAGCCTGCCGTGGGGCTTATT
CCAGCGACTGAGTTGGCCAGGTACAGAACTTGAAATGTCGCTCTCGTACTTTAATAACCGTACAGCCATAGTTACCACCA
AGGTGAGAAACACGAGCGGGGAGCCACAAACCCTGACGCTTGAGTGGCACGGCGCCCCCTTCGACACACACAATTCACAG
CCGCTTACCCTGTCGCCACAGTTGCAGAAAACGGCATCCGGGCCCAGGTTAAGTTGGTCGATGCTGCCGGCAAGAGATAC
CTGGAATCGCCTTATCGATGGGGCCTCGTATCGGCTGGATTTTGAGGGAGAACGGGAGGCCCGGCTGGAAGCTGACAAAG
GTTATGTTGTAAAAACTGACGTTTATCTTGGCCCAGGTGAAAGTCGTGAGTACCGCACCGCCCACAGCTATTTTCACACA
GAGCAGGAAGCCTCTGCCGGTCATTTCTTGTGGGCTGACGTTGCACCTGCATTAAGTGCAAACCGAACTCGCTGGCAGCA
TCGCTTCGACCAGTTGGTAGCTTCAGGAGATCCGACGCTCGACAGGGCTGCTGCCAAGGCCGTTATGACCTTAGCCCACA
ATTGGCGCTCAGCCGCCGGTGCTTTGCAGCGGGATGCCGTCACGCCATCCATTACCTACAAGTGGTTCAATGGCGTCTGG
GCCTGGGATAGCTGGAAGCAGGCGGTGGCGCTGGCAAGATTCGATACTTTGCTGGCAAAGTCGAATGTCGAGGCTATGTT
CGACTATCAATTCGGCGCAGATGACCCTGTCAGACCCCAGGATGCCGGTAATCTCCCCGATGCCATTTTTTATAATCCGG
GGCCTGAACGTGGTGGCGATGGCGGCAACTGGAACGAGCGTAATGGCAAACCGCCACTCGCTGCCTGGGCGGTATGGGAG
ATACATGCTCATGCGCCCGACCTGGACTTTATCAAGCGTATGTATCCCAAACTGGTTGCCTATCACAGCTGGTGGTATCG
CAACCGGGATCATAATGGCAACGGTCTGGCCGAATACGGCGCCAATGTCCATCCCGCTCATGTCCATGATGGCAAGGCCA
ACCCCAAAGCCATCCTCGAGGCGGCGGCGTGGGAGTCGGGCATGGACAATGCGCCCCGATTTGACGCGCGCGACACGCTC
AACGTACTTGAGAATCGTACCGCAGATGGTCGGCTCCTTGGTTATTCTCTGAGTCAGGAGAGCGTTGATCTCAATGCCTA
TCTTTATGCAGAAAAGCGGCTTCTGGCCAAGCTCGCCGATGCCCTGGGGGATGAGGAACACGCCAAAAGCTGGCGCAGAG
ATGCTGATAACCTGGGCAAGCTCATTCGGGAGCAGATGTGGGATGAATCCACAGGCTTCTTTTACGACCTCGATAGCCTG
ACCGGCAAGCCCCTGCTGGGCAGCGGTAAAGGGGTTGAGGGTTGGATTCCGTTGTGGGCCGGTGTCGCCACCCAGCAGCA
GGCTGAGGTGATGATTGGACGCCAATTATCTGCGGGCACCTTTGGCACCCCGATCCCTTTTCCCACCGTGAGTGCCGACA
ATCCAGCCTTTGCGCCCAACAAATACTGGCGCGGTCCGGTTTGGCTGGATCAGCTGTATTTTGCGCTGGCAGGGCTGGAA
AGATACGGCGCTCAACAGCAGGCCAAAACTCTGGCTAGGCGGCTCTTTACCCGAGGCGAGGGAATATTGGGACAGTCACC
CATACGGGAAAATTACCAGCCGCTGACGGGTGAGGGTCTCCATGCCACCAATTTCAGCTGGTCTGCGTCTGTCATTCTGC
TGGCCCATCAGCAATGGTTGGTTGAAGCGGCCGGGCAACCAAAGCCATCTCAAGCACAATCCACGACGCAGTGA

Upstream 100 bases:

>100_bases
TGGCCAACTACCTCAATAAATCGGTCAGTTAAAACCCTTCCTTGCCAGTGGCAGGTGGGAATGCGATTATTTGAATATTG
TATCCAAATAAATAAAGCCT

Downstream 100 bases:

>100_bases
GCCAAATTTGCTGAATCCTCCCTGAATGGCTCGCAGATATCCGTTGGCGAGGATTGAGACAAATCCGGTGCGCTGTTAAT
GTTCTGTTCCCAAGCTGTTG

Product: cell wall surface anchor family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 717

Protein sequence:

>717_residues
MYSCLLLCALGLPGGDLLPYQGVPDSAESRDARGNLSIPAVYTDRGAWHGFHLPDERHAGSFPGPLIIAQEYSLHLSAAM
EAVSIGRDEKPLEQAELQTQSLPWGLFQRLSWPGTELEMSLSYFNNRTAIVTTKVRNTSGEPQTLTLEWHGAPFDTHNSQ
PLTLSPQLQKTASGPRLSWSMLPARDTWNRLIDGASYRLDFEGEREARLEADKGYVVKTDVYLGPGESREYRTAHSYFHT
EQEASAGHFLWADVAPALSANRTRWQHRFDQLVASGDPTLDRAAAKAVMTLAHNWRSAAGALQRDAVTPSITYKWFNGVW
AWDSWKQAVALARFDTLLAKSNVEAMFDYQFGADDPVRPQDAGNLPDAIFYNPGPERGGDGGNWNERNGKPPLAAWAVWE
IHAHAPDLDFIKRMYPKLVAYHSWWYRNRDHNGNGLAEYGANVHPAHVHDGKANPKAILEAAAWESGMDNAPRFDARDTL
NVLENRTADGRLLGYSLSQESVDLNAYLYAEKRLLAKLADALGDEEHAKSWRRDADNLGKLIREQMWDESTGFFYDLDSL
TGKPLLGSGKGVEGWIPLWAGVATQQQAEVMIGRQLSAGTFGTPIPFPTVSADNPAFAPNKYWRGPVWLDQLYFALAGLE
RYGAQQQAKTLARRLFTRGEGILGQSPIRENYQPLTGEGLHATNFSWSASVILLAHQQWLVEAAGQPKPSQAQSTTQ

Sequences:

>Translated_717_residues
MYSCLLLCALGLPGGDLLPYQGVPDSAESRDARGNLSIPAVYTDRGAWHGFHLPDERHAGSFPGPLIIAQEYSLHLSAAM
EAVSIGRDEKPLEQAELQTQSLPWGLFQRLSWPGTELEMSLSYFNNRTAIVTTKVRNTSGEPQTLTLEWHGAPFDTHNSQ
PLTLSPQLQKTASGPRLSWSMLPARDTWNRLIDGASYRLDFEGEREARLEADKGYVVKTDVYLGPGESREYRTAHSYFHT
EQEASAGHFLWADVAPALSANRTRWQHRFDQLVASGDPTLDRAAAKAVMTLAHNWRSAAGALQRDAVTPSITYKWFNGVW
AWDSWKQAVALARFDTLLAKSNVEAMFDYQFGADDPVRPQDAGNLPDAIFYNPGPERGGDGGNWNERNGKPPLAAWAVWE
IHAHAPDLDFIKRMYPKLVAYHSWWYRNRDHNGNGLAEYGANVHPAHVHDGKANPKAILEAAAWESGMDNAPRFDARDTL
NVLENRTADGRLLGYSLSQESVDLNAYLYAEKRLLAKLADALGDEEHAKSWRRDADNLGKLIREQMWDESTGFFYDLDSL
TGKPLLGSGKGVEGWIPLWAGVATQQQAEVMIGRQLSAGTFGTPIPFPTVSADNPAFAPNKYWRGPVWLDQLYFALAGLE
RYGAQQQAKTLARRLFTRGEGILGQSPIRENYQPLTGEGLHATNFSWSASVILLAHQQWLVEAAGQPKPSQAQSTTQ
>Mature_717_residues
MYSCLLLCALGLPGGDLLPYQGVPDSAESRDARGNLSIPAVYTDRGAWHGFHLPDERHAGSFPGPLIIAQEYSLHLSAAM
EAVSIGRDEKPLEQAELQTQSLPWGLFQRLSWPGTELEMSLSYFNNRTAIVTTKVRNTSGEPQTLTLEWHGAPFDTHNSQ
PLTLSPQLQKTASGPRLSWSMLPARDTWNRLIDGASYRLDFEGEREARLEADKGYVVKTDVYLGPGESREYRTAHSYFHT
EQEASAGHFLWADVAPALSANRTRWQHRFDQLVASGDPTLDRAAAKAVMTLAHNWRSAAGALQRDAVTPSITYKWFNGVW
AWDSWKQAVALARFDTLLAKSNVEAMFDYQFGADDPVRPQDAGNLPDAIFYNPGPERGGDGGNWNERNGKPPLAAWAVWE
IHAHAPDLDFIKRMYPKLVAYHSWWYRNRDHNGNGLAEYGANVHPAHVHDGKANPKAILEAAAWESGMDNAPRFDARDTL
NVLENRTADGRLLGYSLSQESVDLNAYLYAEKRLLAKLADALGDEEHAKSWRRDADNLGKLIREQMWDESTGFFYDLDSL
TGKPLLGSGKGVEGWIPLWAGVATQQQAEVMIGRQLSAGTFGTPIPFPTVSADNPAFAPNKYWRGPVWLDQLYFALAGLE
RYGAQQQAKTLARRLFTRGEGILGQSPIRENYQPLTGEGLHATNFSWSASVILLAHQQWLVEAAGQPKPSQAQSTTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789462, Length=742, Percent_Identity=37.0619946091644, Blast_Score=445, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR001661 [H]

Pfam domain/function: PF01204 Trehalase [H]

EC number: NA

Molecular weight: Translated: 79663; Mature: 79663

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSCLLLCALGLPGGDLLPYQGVPDSAESRDARGNLSIPAVYTDRGAWHGFHLPDERHAG
CHHHHEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
SFPGPLIIAQEYSLHLSAAMEAVSIGRDEKPLEQAELQTQSLPWGLFQRLSWPGTELEMS
CCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEEE
LSYFNNRTAIVTTKVRNTSGEPQTLTLEWHGAPFDTHNSQPLTLSPQLQKTASGPRLSWS
EEHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEECCHHHHHCCCCCEEEE
MLPARDTWNRLIDGASYRLDFEGEREARLEADKGYVVKTDVYLGPGESREYRTAHSYFHT
ECCCHHHHHHHHCCCCEEEECCCCCHHHEECCCCEEEEEEEEECCCCCCCHHHHHHHHCC
EQEASAGHFLWADVAPALSANRTRWQHRFDQLVASGDPTLDRAAAKAVMTLAHNWRSAAG
CCCCCCCCEEEECHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ALQRDAVTPSITYKWFNGVWAWDSWKQAVALARFDTLLAKSNVEAMFDYQFGADDPVRPQ
HHHHCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
DAGNLPDAIFYNPGPERGGDGGNWNERNGKPPLAAWAVWEIHAHAPDLDFIKRMYPKLVA
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHH
YHSWWYRNRDHNGNGLAEYGANVHPAHVHDGKANPKAILEAAAWESGMDNAPRFDARDTL
HHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
NVLENRTADGRLLGYSLSQESVDLNAYLYAEKRLLAKLADALGDEEHAKSWRRDADNLGK
HHHHCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHH
LIREQMWDESTGFFYDLDSLTGKPLLGSGKGVEGWIPLWAGVATQQQAEVMIGRQLSAGT
HHHHHHCCCCCCEEEEHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCEECCCC
FGTPIPFPTVSADNPAFAPNKYWRGPVWLDQLYFALAGLERYGAQQQAKTLARRLFTRGE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
GILGQSPIRENYQPLTGEGLHATNFSWSASVILLAHQQWLVEAAGQPKPSQAQSTTQ
CCCCCCCCHHCCCCCCCCCCEECCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MYSCLLLCALGLPGGDLLPYQGVPDSAESRDARGNLSIPAVYTDRGAWHGFHLPDERHAG
CHHHHEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
SFPGPLIIAQEYSLHLSAAMEAVSIGRDEKPLEQAELQTQSLPWGLFQRLSWPGTELEMS
CCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEEE
LSYFNNRTAIVTTKVRNTSGEPQTLTLEWHGAPFDTHNSQPLTLSPQLQKTASGPRLSWS
EEHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEECCHHHHHCCCCCEEEE
MLPARDTWNRLIDGASYRLDFEGEREARLEADKGYVVKTDVYLGPGESREYRTAHSYFHT
ECCCHHHHHHHHCCCCEEEECCCCCHHHEECCCCEEEEEEEEECCCCCCCHHHHHHHHCC
EQEASAGHFLWADVAPALSANRTRWQHRFDQLVASGDPTLDRAAAKAVMTLAHNWRSAAG
CCCCCCCCEEEECHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ALQRDAVTPSITYKWFNGVWAWDSWKQAVALARFDTLLAKSNVEAMFDYQFGADDPVRPQ
HHHHCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
DAGNLPDAIFYNPGPERGGDGGNWNERNGKPPLAAWAVWEIHAHAPDLDFIKRMYPKLVA
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHH
YHSWWYRNRDHNGNGLAEYGANVHPAHVHDGKANPKAILEAAAWESGMDNAPRFDARDTL
HHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
NVLENRTADGRLLGYSLSQESVDLNAYLYAEKRLLAKLADALGDEEHAKSWRRDADNLGK
HHHHCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHH
LIREQMWDESTGFFYDLDSLTGKPLLGSGKGVEGWIPLWAGVATQQQAEVMIGRQLSAGT
HHHHHHCCCCCCEEEEHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCEECCCC
FGTPIPFPTVSADNPAFAPNKYWRGPVWLDQLYFALAGLERYGAQQQAKTLARRLFTRGE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
GILGQSPIRENYQPLTGEGLHATNFSWSASVILLAHQQWLVEAAGQPKPSQAQSTTQ
CCCCCCCCHHCCCCCCCCCCEECCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]