| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776651
Identifier: 119776651
GI number: 119776651
Start: 4153209
End: 4153766
Strand: Direct
Name: 119776651
Synonym: Sama_3519
Alternate gene names: NA
Gene position: 4153209-4153766 (Clockwise)
Preceding gene: 119776650
Following gene: 119776652
Centisome position: 96.45
GC content: 57.71
Gene sequence:
>558_bases ATGCCCTCCGAACTCTGCCTTGCCCTGACCCCAAGATTGGGATTACGCCGCTTTACTGCAGACGATGCGACTGATTTTTA CAACCTGAACAGGGATGCAGAGGTACTCAAATATACGGGGGATCTGCCTTTTGAGAACGCCATTGCTGCCCGGGATTTTA TCCTGGGGTATCAGCATTACCGCGACCATGGATTTGGCCGCTGGGCCATACAGCTTCATTCGGGTGAGTTCATCGGTTTC TGTGGTTTGAGGCAGCACGGGGACGCCAGTGTCGACCTGGGATTCAGGTTAATGCGCGATTATTGGGGCCAAGGCCTGGC CGCCGAAGCGGCCAGAGCCGCCATGGTGCTGGCAATCGATAAATATGGCCTGACTGAGCTGATTGCCCGCGCCATGGCGG GTAATGGCGCCAGCATCGCCCTGCTGGGCAAACTCGGATTCACGCCAAAGGCCGGGTTGGATACTCCACCCTGGCTGGGC TTTGCCGCCAATCTAACCCAGGGAGCCCTGGTGGATGACTTGGCTCTGTGGCGCACCGCTGTTACTCTTTCGCCCTAG
Upstream 100 bases:
>100_bases AACGGGGCTTTTTTTTGCGCAAAGTTTGGTCTATGCCCCTGCGGTGTTTTAGAATTGCCAAAACAGCATGATTAAGCCTT CCGCCGACACTGAGGAACAC
Downstream 100 bases:
>100_bases TCAGGGTTCAGGTTCACAGCAAAGGGGAGCGCGTCATTGTCCGGCACATTCATCACTAAATCTGTCCTCTACTGCGGCGC AGACAGCAGCCAACTCGGCC
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; GNAT Family Acetyltransferase; Ribosomal Protein N-Acetylase-Like Protein; Acetyltransferase Ribosomal Protein N-Acetylase; Acetyltransferase GNAT Family Protein
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPSELCLALTPRLGLRRFTADDATDFYNLNRDAEVLKYTGDLPFENAIAARDFILGYQHYRDHGFGRWAIQLHSGEFIGF CGLRQHGDASVDLGFRLMRDYWGQGLAAEAARAAMVLAIDKYGLTELIARAMAGNGASIALLGKLGFTPKAGLDTPPWLG FAANLTQGALVDDLALWRTAVTLSP
Sequences:
>Translated_185_residues MPSELCLALTPRLGLRRFTADDATDFYNLNRDAEVLKYTGDLPFENAIAARDFILGYQHYRDHGFGRWAIQLHSGEFIGF CGLRQHGDASVDLGFRLMRDYWGQGLAAEAARAAMVLAIDKYGLTELIARAMAGNGASIALLGKLGFTPKAGLDTPPWLG FAANLTQGALVDDLALWRTAVTLSP >Mature_184_residues PSELCLALTPRLGLRRFTADDATDFYNLNRDAEVLKYTGDLPFENAIAARDFILGYQHYRDHGFGRWAIQLHSGEFIGFC GLRQHGDASVDLGFRLMRDYWGQGLAAEAARAAMVLAIDKYGLTELIARAMAGNGASIALLGKLGFTPKAGLDTPPWLGF AANLTQGALVDDLALWRTAVTLSP
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20163; Mature: 20032
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSELCLALTPRLGLRRFTADDATDFYNLNRDAEVLKYTGDLPFENAIAARDFILGYQHY CCCCEEEEECCCCCCEECCCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH RDHGFGRWAIQLHSGEFIGFCGLRQHGDASVDLGFRLMRDYWGQGLAAEAARAAMVLAID HCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHEEEEEEEC KYGLTELIARAMAGNGASIALLGKLGFTPKAGLDTPPWLGFAANLTQGALVDDLALWRTA CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHE VTLSP EEECC >Mature Secondary Structure PSELCLALTPRLGLRRFTADDATDFYNLNRDAEVLKYTGDLPFENAIAARDFILGYQHY CCCEEEEECCCCCCEECCCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH RDHGFGRWAIQLHSGEFIGFCGLRQHGDASVDLGFRLMRDYWGQGLAAEAARAAMVLAID HCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHEEEEEEEC KYGLTELIARAMAGNGASIALLGKLGFTPKAGLDTPPWLGFAANLTQGALVDDLALWRTA CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHE VTLSP EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA