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The map label for this gene is yiiM [H]

Identifier: 119776652

GI number: 119776652

Start: 4153803

End: 4154492

Strand: Direct

Name: yiiM [H]

Synonym: Sama_3520

Alternate gene names: 119776652

Gene position: 4153803-4154492 (Clockwise)

Preceding gene: 119776651

Following gene: 119776656

Centisome position: 96.46

GC content: 54.35

Gene sequence:

>690_bases
TTGTCCGGCACATTCATCACTAAATCTGTCCTCTACTGCGGCGCAGACAGCAGCCAACTCGGCCCGGTATCCAGCGGTAT
TGCACACAAAAACCGCGCAGCAACACTGCAAGTCACAGAGCAAGGCATTGTGGGCGATGCTCAGGTGGATACCCGCCACC
ATGGCGGACCAGACAGGGCCGTGCATCATTTTCCCCGGGAACATTACGGTGAATATCGCCGAAGAGACATGTTCCGGGGT
TTTGTAGACGCCCCGTCAATGGGTGAAAACATCAGTACCGTTGGCATCACAGAACAAACACTGCATATTGGCGATATTTT
GAGCTTCGGCAGTACAGTGCTGCAGGTATCTCAGCCCCGATCTCCCTGTTTTAAACTGGATTTACGCTTCGCCTACCCCG
GCTTTGCACTGGCGATGCAATCTCTGGGTAAAAGTGGCTGGTTTTACCGTGTGCTGGCCCCCGGTGAAATCACGGAAAAC
GATAGTCTGCAGCTGAAAGAACGCCTGTCCGACATCAGTGTGGCAAATGCCATGCAGTGTTATTTCGCACCTGAATTTAA
CGAAACGGGTTATCGGCGATTGCTGGCGTGCCCGGGCCTCGCCCAAAGCTGGCGTAACAGCCTGGAAAAGCGCCTTGCAA
GCGGTAAGATTGAAGACTGGCGCCCGCGCTTGATGGGACCAGGGCAGTAA

Upstream 100 bases:

>100_bases
AACCCAGGGAGCCCTGGTGGATGACTTGGCTCTGTGGCGCACCGCTGTTACTCTTTCGCCCTAGTCAGGGTTCAGGTTCA
CAGCAAAGGGGAGCGCGTCA

Downstream 100 bases:

>100_bases
AGCTACTGTGGTTGTTGGCAGGCAATATCTGCGTGGTGAGCAAGAGCTGACACTGAGTCTTTAAACGCGAAAAAGCCCGG
CAATGCCGGGCTTTTAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSGTFITKSVLYCGADSSQLGPVSSGIAHKNRAATLQVTEQGIVGDAQVDTRHHGGPDRAVHHFPREHYGEYRRRDMFRG
FVDAPSMGENISTVGITEQTLHIGDILSFGSTVLQVSQPRSPCFKLDLRFAYPGFALAMQSLGKSGWFYRVLAPGEITEN
DSLQLKERLSDISVANAMQCYFAPEFNETGYRRLLACPGLAQSWRNSLEKRLASGKIEDWRPRLMGPGQ

Sequences:

>Translated_229_residues
MSGTFITKSVLYCGADSSQLGPVSSGIAHKNRAATLQVTEQGIVGDAQVDTRHHGGPDRAVHHFPREHYGEYRRRDMFRG
FVDAPSMGENISTVGITEQTLHIGDILSFGSTVLQVSQPRSPCFKLDLRFAYPGFALAMQSLGKSGWFYRVLAPGEITEN
DSLQLKERLSDISVANAMQCYFAPEFNETGYRRLLACPGLAQSWRNSLEKRLASGKIEDWRPRLMGPGQ
>Mature_228_residues
SGTFITKSVLYCGADSSQLGPVSSGIAHKNRAATLQVTEQGIVGDAQVDTRHHGGPDRAVHHFPREHYGEYRRRDMFRGF
VDAPSMGENISTVGITEQTLHIGDILSFGSTVLQVSQPRSPCFKLDLRFAYPGFALAMQSLGKSGWFYRVLAPGEITEND
SLQLKERLSDISVANAMQCYFAPEFNETGYRRLLACPGLAQSWRNSLEKRLASGKIEDWRPRLMGPGQ

Specific function: Unknown

COG id: COG2258

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Escherichia coli, GI87082350, Length=204, Percent_Identity=44.6078431372549, Blast_Score=181, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005163
- InterPro:   IPR005302
- InterPro:   IPR015808
- InterPro:   IPR011037 [H]

Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]

EC number: NA

Molecular weight: Translated: 25368; Mature: 25237

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTFITKSVLYCGADSSQLGPVSSGIAHKNRAATLQVTEQGIVGDAQVDTRHHGGPDRA
CCCCEEEHHHEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCHH
VHHFPREHYGEYRRRDMFRGFVDAPSMGENISTVGITEQTLHIGDILSFGSTVLQVSQPR
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCHHEEEECCCC
SPCFKLDLRFAYPGFALAMQSLGKSGWFYRVLAPGEITENDSLQLKERLSDISVANAMQC
CCEEEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHE
YFAPEFNETGYRRLLACPGLAQSWRNSLEKRLASGKIEDWRPRLMGPGQ
EECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGTFITKSVLYCGADSSQLGPVSSGIAHKNRAATLQVTEQGIVGDAQVDTRHHGGPDRA
CCCEEEHHHEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCHH
VHHFPREHYGEYRRRDMFRGFVDAPSMGENISTVGITEQTLHIGDILSFGSTVLQVSQPR
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCHHEEEECCCC
SPCFKLDLRFAYPGFALAMQSLGKSGWFYRVLAPGEITENDSLQLKERLSDISVANAMQC
CCEEEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHE
YFAPEFNETGYRRLLACPGLAQSWRNSLEKRLASGKIEDWRPRLMGPGQ
EECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]