| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yihV [C]
Identifier: 119776650
GI number: 119776650
Start: 4152140
End: 4153018
Strand: Direct
Name: yihV [C]
Synonym: Sama_3518
Alternate gene names: 119776650
Gene position: 4152140-4153018 (Clockwise)
Preceding gene: 119776649
Following gene: 119776651
Centisome position: 96.42
GC content: 58.48
Gene sequence:
>879_bases ATGGCCAATGTTTTACTGGTAGCCAACCTCAATTGTGACCGCATCTTGTTGCTGGATAAACCACTCACCAGCGGCGGGCG TTTTCATTACCACGATGGGGGCCAACGCCTGGGAGGCGGCGGCGCCAACACGGGGCTGGGGCTGGTATGGGCCGGGCACA GGGTAGCTCTGGTCAGCCAGGTCGGCAGAGATAAGGTGGGCGACTGGCTGCTCGCCGAAACCAGCACTGCCGGTATTGAT TGCCACCTCATTTCGCGCCGCCCCGGCAATACCTGCGAGATGTTACTGATGATGACCCCTAACGGCGACCGAACCATCAT GCGGCCCCAAAGGCCCATCTTTGAGTTGCCGGTGCCGCCCCGCTGGCAGCGCTGGGACGTGCTCTATATCAACTCGTCTG CCGAAGGCGCCGTCAGCTGGGCCAAAACAGCGCTGGAACATTGTCTGGTGGTTGGACAATTGGCGAAAGACGAACGTCAG CGCCCCTGTCATATCCTGATTACCTCGGCATCGGATCTCGCTGGCAGAGCCTCGGGTGACCTGTGGCAGTATGCCAAAGG CATTGCCGGTGACAGCCTGCAGCATTTTATCGTGACCGATGGCCCCAAAGGGGCGAAGGCCTACAGCGAAACCGGGACTC TGCATGTTCCGGCCAGACCTGCAAACGTGGTGGATACCACAGGGGCTGGTGATGTGTATGCCGCTGGGCTGATCCATGGT TTGGTCTCGGGTCTTGCGCTGCAGCAAGCCATGGAAGAAGCCGCCATTTGGGCAGCAATAGCAGTGGAAAGTGAAAGCTC TACCCCCGGTGAAGCACTTAAAGATCATTTGGCGGAAAAAGAGGCTGAATGTCATACAACTGCAACCAAGTCCCTCTAG
Upstream 100 bases:
>100_bases CAGGAAACCGTACGCCAATCCCCCGAGTCATTCACGCCACACTTTGCAGCCCCGCCAAGGGCGGTTACCATCAAACCATG ACTGTTTTCGGAACTTCAGC
Downstream 100 bases:
>100_bases TATAAGCCCCGTGAGATGCATGATTTTGGGTTTGCGCTCCTGAACTTCCCATTTGTCAGTTGTTTGCTCGTTATGTCGCC CCGTCCCCCGAACGGGGCTT
Product: carbohydrate kinase
Products: NA
Alternate protein names: Carbohydrate Kinase; Carbohydrate Kinase PfkB Family; Site-Specific DNA-Methyltransferase; PfkB Family Carbohydrate Kinase; PfkB Domain Protein; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MANVLLVANLNCDRILLLDKPLTSGGRFHYHDGGQRLGGGGANTGLGLVWAGHRVALVSQVGRDKVGDWLLAETSTAGID CHLISRRPGNTCEMLLMMTPNGDRTIMRPQRPIFELPVPPRWQRWDVLYINSSAEGAVSWAKTALEHCLVVGQLAKDERQ RPCHILITSASDLAGRASGDLWQYAKGIAGDSLQHFIVTDGPKGAKAYSETGTLHVPARPANVVDTTGAGDVYAAGLIHG LVSGLALQQAMEEAAIWAAIAVESESSTPGEALKDHLAEKEAECHTTATKSL
Sequences:
>Translated_292_residues MANVLLVANLNCDRILLLDKPLTSGGRFHYHDGGQRLGGGGANTGLGLVWAGHRVALVSQVGRDKVGDWLLAETSTAGID CHLISRRPGNTCEMLLMMTPNGDRTIMRPQRPIFELPVPPRWQRWDVLYINSSAEGAVSWAKTALEHCLVVGQLAKDERQ RPCHILITSASDLAGRASGDLWQYAKGIAGDSLQHFIVTDGPKGAKAYSETGTLHVPARPANVVDTTGAGDVYAAGLIHG LVSGLALQQAMEEAAIWAAIAVESESSTPGEALKDHLAEKEAECHTTATKSL >Mature_291_residues ANVLLVANLNCDRILLLDKPLTSGGRFHYHDGGQRLGGGGANTGLGLVWAGHRVALVSQVGRDKVGDWLLAETSTAGIDC HLISRRPGNTCEMLLMMTPNGDRTIMRPQRPIFELPVPPRWQRWDVLYINSSAEGAVSWAKTALEHCLVVGQLAKDERQR PCHILITSASDLAGRASGDLWQYAKGIAGDSLQHFIVTDGPKGAKAYSETGTLHVPARPANVVDTTGAGDVYAAGLIHGL VSGLALQQAMEEAAIWAAIAVESESSTPGEALKDHLAEKEAECHTTATKSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31155; Mature: 31024
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVLLVANLNCDRILLLDKPLTSGGRFHYHDGGQRLGGGGANTGLGLVWAGHRVALVSQ CCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEHHH VGRDKVGDWLLAETSTAGIDCHLISRRPGNTCEMLLMMTPNGDRTIMRPQRPIFELPVPP HCCHHCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCEEECCCCC RWQRWDVLYINSSAEGAVSWAKTALEHCLVVGQLAKDERQRPCHILITSASDLAGRASGD CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCC LWQYAKGIAGDSLQHFIVTDGPKGAKAYSETGTLHVPARPANVVDTTGAGDVYAAGLIHG HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCEECCCCCHHHHHHHHHH LVSGLALQQAMEEAAIWAAIAVESESSTPGEALKDHLAEKEAECHTTATKSL HHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANVLLVANLNCDRILLLDKPLTSGGRFHYHDGGQRLGGGGANTGLGLVWAGHRVALVSQ CCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEHHH VGRDKVGDWLLAETSTAGIDCHLISRRPGNTCEMLLMMTPNGDRTIMRPQRPIFELPVPP HCCHHCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCEEECCCCC RWQRWDVLYINSSAEGAVSWAKTALEHCLVVGQLAKDERQRPCHILITSASDLAGRASGD CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCC LWQYAKGIAGDSLQHFIVTDGPKGAKAYSETGTLHVPARPANVVDTTGAGDVYAAGLIHG HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCEECCCCCHHHHHHHHHH LVSGLALQQAMEEAAIWAAIAVESESSTPGEALKDHLAEKEAECHTTATKSL HHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA