| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is envZ [H]
Identifier: 119776643
GI number: 119776643
Start: 4145737
End: 4147053
Strand: Direct
Name: envZ [H]
Synonym: Sama_3511
Alternate gene names: 119776643
Gene position: 4145737-4147053 (Clockwise)
Preceding gene: 119776642
Following gene: 119776644
Centisome position: 96.27
GC content: 55.28
Gene sequence:
>1317_bases ATGAAACTTCGCTGGTGGCAGCGCTTGCTGCCCCGCAGCGCCTTCAGTCAAACCGTGATGCTGATAGGCTGTTTGCTGTT GATTAATCAGCTGTTTTCCTATGTGTCTGTGGCGCTTTACGTCATCAAACCCAGCTATCAGCAAATCAACCAGCTCATTG CCCGGCAAATCAATTTTTTGTTTACCGAAGAGGCGGTCATTGGCCGCGAATATCTGAGTTTGGTGGATGCCCTCAATGCC AAGGTCGGCGATGGCAGCATGCACGTTTTCAACCAAAAGCAGGCCAGGGAAGCCGGCATAGACAGCGCCACCTATTACGG TTTGCTGTCGAATCAGATGTCAGAATACCTCGGCGGCAGCGCCGAAGTACGCATCACCCAGGGCGAAACAGTGCAGATTT GGATCCGCCCGCCACAGGCGCCCAGTGTTTGGATACGGGTACCTCTGTCGAGTTTCAACGAACTGGAAATGTCGCTGCTG ACCCTGTATCTGATGGTGATTGGTGCGCTCAGTGTCGCCGGCGGCTGGCTGTTTGCCCGCCGCCAGAGCAAACCCCTTAA GGCGCTGCAGAAGGCCGCCATCAATGTATCGCGGGGGGAATACCCCGAAGCCATTCCCCCTGCCGGCTCCAGTGAAATAG TGGAAGTGACCCACGCCTTTAACCAGATGGCCCACAGCATGCGAATGTTGGAACAGGACCGGGCGTTGATGATGGCGGGG ATCTCCCACGATCTGCGCACACCCCTTACCCGAATTCGTCTGGCCTCTGAAATGATGGTGGATGAGGATGCCTACCTCAG AGACGGCATCATCGCCGACATCGATGACATGAACGCCATCATCAATCAGTTCATCGCCTACATACGCCAGGATCAGGAAG CTGTTTGGGAGAAGGCCGACATCAATCAGCTGGTGAGCGAATATGCCCAGGCCGAGTCCAAACGTGATGGGGTAATTGAA CTGGCACTCGGCCCCTGTATAGGGATCCCGGTGCAGGTTATCGCCATCAAACGGGTGCTGGGTAATCTGGTAGAAAACGC CTTTCGCTATGGTCGGGGCTGGATACGCATTTCAACCCGGATGGAGAAGTCCTCTTTGGTGCTAACCGTGGAAGATAACG GCCCCGGCATTCCGGTTGATCAAATCCCCAAACTCTTTCAACCCTTTACCCAGGGCGACATGGCGCGGGGCAGCCTTGGC TCCGGTCTGGGGCTGGCCATTATCAAGCGCATTGTCGACCGCCATCAGGGCAAGGTGAAACTCAGTAACCGGGTTGAAGG TGGTCTGAAAGCCGAGGTATTTTTACCGCTGGAATAA
Upstream 100 bases:
>100_bases AAAAGATCCCGCCAATCCAAGGTATATCCAAACCGTGTGGGGCCTGGGCTATGTGTTTGTACCCGACGGCAGCGCCCGTC GTTAAGCCCGGAGCAAAATC
Downstream 100 bases:
>100_bases GTCAGCTTCATAAAATTGTCATCCTATCGTCATAAGCTGATGAAAATCGGCCTTAAACGTGAATCCGGATGAAAATTTCG ACCCTGTCTCTGGGCGCATC
Product: osmolarity sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MKLRWWQRLLPRSAFSQTVMLIGCLLLINQLFSYVSVALYVIKPSYQQINQLIARQINFLFTEEAVIGREYLSLVDALNA KVGDGSMHVFNQKQAREAGIDSATYYGLLSNQMSEYLGGSAEVRITQGETVQIWIRPPQAPSVWIRVPLSSFNELEMSLL TLYLMVIGALSVAGGWLFARRQSKPLKALQKAAINVSRGEYPEAIPPAGSSEIVEVTHAFNQMAHSMRMLEQDRALMMAG ISHDLRTPLTRIRLASEMMVDEDAYLRDGIIADIDDMNAIINQFIAYIRQDQEAVWEKADINQLVSEYAQAESKRDGVIE LALGPCIGIPVQVIAIKRVLGNLVENAFRYGRGWIRISTRMEKSSLVLTVEDNGPGIPVDQIPKLFQPFTQGDMARGSLG SGLGLAIIKRIVDRHQGKVKLSNRVEGGLKAEVFLPLE
Sequences:
>Translated_438_residues MKLRWWQRLLPRSAFSQTVMLIGCLLLINQLFSYVSVALYVIKPSYQQINQLIARQINFLFTEEAVIGREYLSLVDALNA KVGDGSMHVFNQKQAREAGIDSATYYGLLSNQMSEYLGGSAEVRITQGETVQIWIRPPQAPSVWIRVPLSSFNELEMSLL TLYLMVIGALSVAGGWLFARRQSKPLKALQKAAINVSRGEYPEAIPPAGSSEIVEVTHAFNQMAHSMRMLEQDRALMMAG ISHDLRTPLTRIRLASEMMVDEDAYLRDGIIADIDDMNAIINQFIAYIRQDQEAVWEKADINQLVSEYAQAESKRDGVIE LALGPCIGIPVQVIAIKRVLGNLVENAFRYGRGWIRISTRMEKSSLVLTVEDNGPGIPVDQIPKLFQPFTQGDMARGSLG SGLGLAIIKRIVDRHQGKVKLSNRVEGGLKAEVFLPLE >Mature_438_residues MKLRWWQRLLPRSAFSQTVMLIGCLLLINQLFSYVSVALYVIKPSYQQINQLIARQINFLFTEEAVIGREYLSLVDALNA KVGDGSMHVFNQKQAREAGIDSATYYGLLSNQMSEYLGGSAEVRITQGETVQIWIRPPQAPSVWIRVPLSSFNELEMSLL TLYLMVIGALSVAGGWLFARRQSKPLKALQKAAINVSRGEYPEAIPPAGSSEIVEVTHAFNQMAHSMRMLEQDRALMMAG ISHDLRTPLTRIRLASEMMVDEDAYLRDGIIADIDDMNAIINQFIAYIRQDQEAVWEKADINQLVSEYAQAESKRDGVIE LALGPCIGIPVQVIAIKRVLGNLVENAFRYGRGWIRISTRMEKSSLVLTVEDNGPGIPVDQIPKLFQPFTQGDMARGSLG SGLGLAIIKRIVDRHQGKVKLSNRVEGGLKAEVFLPLE
Specific function: Member of the two-component regulatory system envZ/ompR involved in the regulation of osmoregulation (genes ompF and ompC). EnvZ functions as a membrane-associated protein kinase that phosphorylates ompR in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=441, Percent_Identity=41.4965986394558, Blast_Score=337, Evalue=8e-94, Organism=Escherichia coli, GI1790346, Length=271, Percent_Identity=31.7343173431734, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788393, Length=269, Percent_Identity=28.6245353159851, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1787894, Length=293, Percent_Identity=29.3515358361775, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788549, Length=218, Percent_Identity=30.7339449541284, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1786912, Length=220, Percent_Identity=33.1818181818182, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1790551, Length=272, Percent_Identity=30.5147058823529, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1790861, Length=249, Percent_Identity=27.710843373494, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1786600, Length=226, Percent_Identity=27.4336283185841, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787374, Length=281, Percent_Identity=25.9786476868327, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI48994928, Length=216, Percent_Identity=27.3148148148148, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082128, Length=278, Percent_Identity=25.1798561151079, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786783, Length=300, Percent_Identity=24, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI145693157, Length=251, Percent_Identity=24.7011952191235, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1788279, Length=241, Percent_Identity=26.5560165975104, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87081816, Length=268, Percent_Identity=26.1194029850746, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790436, Length=214, Percent_Identity=23.3644859813084, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1789149, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 48862; Mature: 48862
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRWWQRLLPRSAFSQTVMLIGCLLLINQLFSYVSVALYVIKPSYQQINQLIARQINFL CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FTEEAVIGREYLSLVDALNAKVGDGSMHVFNQKQAREAGIDSATYYGLLSNQMSEYLGGS HHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHCCC AEVRITQGETVQIWIRPPQAPSVWIRVPLSSFNELEMSLLTLYLMVIGALSVAGGWLFAR CEEEEECCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEC RQSKPLKALQKAAINVSRGEYPEAIPPAGSSEIVEVTHAFNQMAHSMRMLEQDRALMMAG CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ISHDLRTPLTRIRLASEMMVDEDAYLRDGIIADIDDMNAIINQFIAYIRQDQEAVWEKAD CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH INQLVSEYAQAESKRDGVIELALGPCIGIPVQVIAIKRVLGNLVENAFRYGRGWIRISTR HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE MEKSSLVLTVEDNGPGIPVDQIPKLFQPFTQGDMARGSLGSGLGLAIIKRIVDRHQGKVK ECCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE LSNRVEGGLKAEVFLPLE ECCCCCCCCEEEEEEECC >Mature Secondary Structure MKLRWWQRLLPRSAFSQTVMLIGCLLLINQLFSYVSVALYVIKPSYQQINQLIARQINFL CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FTEEAVIGREYLSLVDALNAKVGDGSMHVFNQKQAREAGIDSATYYGLLSNQMSEYLGGS HHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHCCC AEVRITQGETVQIWIRPPQAPSVWIRVPLSSFNELEMSLLTLYLMVIGALSVAGGWLFAR CEEEEECCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEC RQSKPLKALQKAAINVSRGEYPEAIPPAGSSEIVEVTHAFNQMAHSMRMLEQDRALMMAG CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ISHDLRTPLTRIRLASEMMVDEDAYLRDGIIADIDDMNAIINQFIAYIRQDQEAVWEKAD CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH INQLVSEYAQAESKRDGVIELALGPCIGIPVQVIAIKRVLGNLVENAFRYGRGWIRISTR HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE MEKSSLVLTVEDNGPGIPVDQIPKLFQPFTQGDMARGSLGSGLGLAIIKRIVDRHQGKVK ECCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE LSNRVEGGLKAEVFLPLE ECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6292200; 2997120; 9278503; 8132603; 2277041; 2824492; 1323560; 9817206; 10426948 [H]