| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cheA [H]
Identifier: 119776627
GI number: 119776627
Start: 4124645
End: 4126732
Strand: Direct
Name: cheA [H]
Synonym: Sama_3495
Alternate gene names: 119776627
Gene position: 4124645-4126732 (Clockwise)
Preceding gene: 119776626
Following gene: 119776628
Centisome position: 95.79
GC content: 53.83
Gene sequence:
>2088_bases ATGGACATAGATCTTAGCCAATTCAGTCAGGTGTTCTTCGAGGAAAGTATCGAGGGCCTGGCGATTATGGAGTCTGAGCT GCTGAAGCTGGACGTGGCGGCGCCGGACCCAGAAACCATTAACACCATTTTCAGAGCAGCACACTCCATCAAAGGCGGCA GTGCCACATTCGGTTTTATGCAGGTGGCCAACTACACCCATCTGCTTGAAACTCTGCTTGACGAAATCCGCGATGGTCGT CGGCAGATGCAGCCTGACCATGTTGACATGCTGCTGCTTTCGGTGGATTTACTCAGGGGCATGTTCGAAGCCCTGATGAG CCAAGCCGAATTCAACGACCCCAAGTTACCCGAGCTTGAGTTGCGGCTGAATAACACCCTGGCCAATCAACCAAGCCAAA CGCAATCGATTTCTCCCCCTCAGGCAACAATGGCCTCAGACTCAAAAACGCTGTGCTGGCAGATTGATTTCAAGGCTGGC GCAGACATTATGCGCTGCGGCAACGATCCCATGTTGATGTTTGCTGAGCTGGCCTCCAAGGGCACACTGACGGCCGAGCT CCTGCCGGTTTCCTTTCCCGCATGGGACGACTTTGACCCCGAAGCCTGCTACCTGCACTGGCGCTTAAGATTGATCACAG ACGAGCCACTGGAAAAACTCAAAGAGGTGTTCGAGTGGGTCGAAGATGAATGCGAAATCAGTTACCAACAAACAGCAGCA GCCCCTTCTGCTGATACCTCCACAGAGATGCTGTCGCCATCACCACAATCCGAAGTCGACCCGCCTGTAGCAGCCCCTGA TGTCATTGCGCTGACGCCCCAGGTTCAGGCTCTTGCCACAGACAAAGCCGTAGCCAGCCAAAAACAAAGCGCTGCAGCCG CCAAGAGTGGAGAAAGCAGCTCCATCAGGGTCAGCACAGAAAAAATCGATATGCTCATCAATATGGTGGGTGAGCTGGTG ATAACCCAAGCCATGCTGGGCCAAATAGGTCAACAGGATGAAATCAATCAGGAGTCGCTGTTACTGCTGCAACAGGGACT AGAGCAGCTGGCTTCCCATACCCGGGATTTGCAGGAAAGTGTCATGCAGATTCGCATGCTGCCCATCAGCTTTGCGTTTA ACCGCTTCCCCCGCTTGGTCAGAGACATTGGCCAGCAGCTGGGTAAGAAAGTAGAACTCATCCTCAAGGGTGAAGACACT GAGCTGGATAAAACCGTCCTTGAAAAAATTGTCGACCCCATGGTGCATCTGGTGCGCAATTCGCTCGACCATGGGCTGGA ATCACCCGAAGCCAGATTGGCACAGGGTAAGTCTGAAACCGGCACCATCATGCTCAATGCCTATCATCAGGGCGGCTGCA TCATCATAGAAATAGCGGACGATGGCGCCGGGCTGAACACCCACAAGATCCTTGAAAAAGCCCGTCAAAAAGGGCTGGTC GGCGCCGAGGAAGAGTTATCGGAAGAAGCCATCCACCAGCTGATATTCAGACCTGGCTTTTCCACCGCCGATGCAGTGTC AGACCTCTCAGGGCGTGGCGTGGGCATGGATGTGGTCAAGCGCAATATTCACGAGCTCAATGGCTCCATTGAATTGAAAT CCGAGGCGGGTAAAGGCAGCCGTTTCACCATTCGACTTCCCCTGACGCTGGCCATACTCGACGGCCAGCTTATCCGCATC GGCAAGCACATATACGTGGTGCCACTGGTGTCCATCTACGAATCGTTGCAGGTGCCCACCAACCGTATCAATCGGCTGTC CGATGGCCATGAGCTGATCCGTCTGCGGGATGAATATTTACCGGTAATCAAGATGTATCGAGAGTTCAACCACGATGCTG ACGCGCGGGAAATCAAAGATGGCCTGGTGATGGTAGTGGATCATAACAATGAAAAGGCCGGCCTGCTGGTGGACGAACTT CTCGCGCAACAACAGGTTGTAATCAAAAGCCTGGAGGAGAACTACACCCGTATTCCGGGCATTTCGGGCGCCACCATACT GGGCGACGGCACAGTCGCACTCATCATAGACGTTGCCGGACTGGTCAAGTTGGCCGGTATAGGCAGCAGCAATGAACACG CCGCGTAA
Upstream 100 bases:
>100_bases GCAGCAGGAGCTACAGGTTGGATTGTGAAACCCTTTAATCCGGAACAGTTGCTGGCCACAGTGCGCAAAGTGTTGGGATA ACCCGCAGAGAGACTAGGGA
Downstream 100 bases:
>100_bases AAAGGAAGACTCGATATGGCTGACATTTCCATCGAACAGGTCAAGCAGGGTAATCAACAGTATCTGAGCTTCATCATGGC CAACGAGGAGTACGGCGTGG
Product: putative CheA signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MDIDLSQFSQVFFEESIEGLAIMESELLKLDVAAPDPETINTIFRAAHSIKGGSATFGFMQVANYTHLLETLLDEIRDGR RQMQPDHVDMLLLSVDLLRGMFEALMSQAEFNDPKLPELELRLNNTLANQPSQTQSISPPQATMASDSKTLCWQIDFKAG ADIMRCGNDPMLMFAELASKGTLTAELLPVSFPAWDDFDPEACYLHWRLRLITDEPLEKLKEVFEWVEDECEISYQQTAA APSADTSTEMLSPSPQSEVDPPVAAPDVIALTPQVQALATDKAVASQKQSAAAAKSGESSSIRVSTEKIDMLINMVGELV ITQAMLGQIGQQDEINQESLLLLQQGLEQLASHTRDLQESVMQIRMLPISFAFNRFPRLVRDIGQQLGKKVELILKGEDT ELDKTVLEKIVDPMVHLVRNSLDHGLESPEARLAQGKSETGTIMLNAYHQGGCIIIEIADDGAGLNTHKILEKARQKGLV GAEEELSEEAIHQLIFRPGFSTADAVSDLSGRGVGMDVVKRNIHELNGSIELKSEAGKGSRFTIRLPLTLAILDGQLIRI GKHIYVVPLVSIYESLQVPTNRINRLSDGHELIRLRDEYLPVIKMYREFNHDADAREIKDGLVMVVDHNNEKAGLLVDEL LAQQQVVIKSLEENYTRIPGISGATILGDGTVALIIDVAGLVKLAGIGSSNEHAA
Sequences:
>Translated_695_residues MDIDLSQFSQVFFEESIEGLAIMESELLKLDVAAPDPETINTIFRAAHSIKGGSATFGFMQVANYTHLLETLLDEIRDGR RQMQPDHVDMLLLSVDLLRGMFEALMSQAEFNDPKLPELELRLNNTLANQPSQTQSISPPQATMASDSKTLCWQIDFKAG ADIMRCGNDPMLMFAELASKGTLTAELLPVSFPAWDDFDPEACYLHWRLRLITDEPLEKLKEVFEWVEDECEISYQQTAA APSADTSTEMLSPSPQSEVDPPVAAPDVIALTPQVQALATDKAVASQKQSAAAAKSGESSSIRVSTEKIDMLINMVGELV ITQAMLGQIGQQDEINQESLLLLQQGLEQLASHTRDLQESVMQIRMLPISFAFNRFPRLVRDIGQQLGKKVELILKGEDT ELDKTVLEKIVDPMVHLVRNSLDHGLESPEARLAQGKSETGTIMLNAYHQGGCIIIEIADDGAGLNTHKILEKARQKGLV GAEEELSEEAIHQLIFRPGFSTADAVSDLSGRGVGMDVVKRNIHELNGSIELKSEAGKGSRFTIRLPLTLAILDGQLIRI GKHIYVVPLVSIYESLQVPTNRINRLSDGHELIRLRDEYLPVIKMYREFNHDADAREIKDGLVMVVDHNNEKAGLLVDEL LAQQQVVIKSLEENYTRIPGISGATILGDGTVALIIDVAGLVKLAGIGSSNEHAA >Mature_695_residues MDIDLSQFSQVFFEESIEGLAIMESELLKLDVAAPDPETINTIFRAAHSIKGGSATFGFMQVANYTHLLETLLDEIRDGR RQMQPDHVDMLLLSVDLLRGMFEALMSQAEFNDPKLPELELRLNNTLANQPSQTQSISPPQATMASDSKTLCWQIDFKAG ADIMRCGNDPMLMFAELASKGTLTAELLPVSFPAWDDFDPEACYLHWRLRLITDEPLEKLKEVFEWVEDECEISYQQTAA APSADTSTEMLSPSPQSEVDPPVAAPDVIALTPQVQALATDKAVASQKQSAAAAKSGESSSIRVSTEKIDMLINMVGELV ITQAMLGQIGQQDEINQESLLLLQQGLEQLASHTRDLQESVMQIRMLPISFAFNRFPRLVRDIGQQLGKKVELILKGEDT ELDKTVLEKIVDPMVHLVRNSLDHGLESPEARLAQGKSETGTIMLNAYHQGGCIIIEIADDGAGLNTHKILEKARQKGLV GAEEELSEEAIHQLIFRPGFSTADAVSDLSGRGVGMDVVKRNIHELNGSIELKSEAGKGSRFTIRLPLTLAILDGQLIRI GKHIYVVPLVSIYESLQVPTNRINRLSDGHELIRLRDEYLPVIKMYREFNHDADAREIKDGLVMVVDHNNEKAGLLVDEL LAQQQVVIKSLEENYTRIPGISGATILGDGTVALIIDVAGLVKLAGIGSSNEHAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=710, Percent_Identity=40.7042253521127, Blast_Score=494, Evalue=1e-141,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR015162 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF01584 CheW; PF09078 CheY-binding; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 76479; Mature: 76479
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIDLSQFSQVFFEESIEGLAIMESELLKLDVAAPDPETINTIFRAAHSIKGGSATFGFM CCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHH QVANYTHLLETLLDEIRDGRRQMQPDHVDMLLLSVDLLRGMFEALMSQAEFNDPKLPELE HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE LRLNNTLANQPSQTQSISPPQATMASDSKTLCWQIDFKAGADIMRCGNDPMLMFAELASK EEECCHHCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCHHHHCCCCCHHHHHHHHCC GTLTAELLPVSFPAWDDFDPEACYLHWRLRLITDEPLEKLKEVFEWVEDECEISYQQTAA CCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHCC APSADTSTEMLSPSPQSEVDPPVAAPDVIALTPQVQALATDKAVASQKQSAAAAKSGESS CCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCC SIRVSTEKIDMLINMVGELVITQAMLGQIGQQDEINQESLLLLQQGLEQLASHTRDLQES EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VMQIRMLPISFAFNRFPRLVRDIGQQLGKKVELILKGEDTELDKTVLEKIVDPMVHLVRN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH SLDHGLESPEARLAQGKSETGTIMLNAYHQGGCIIIEIADDGAGLNTHKILEKARQKGLV HHHCCCCCCHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCC GAEEELSEEAIHQLIFRPGFSTADAVSDLSGRGVGMDVVKRNIHELNGSIELKSEAGKGS CCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCC RFTIRLPLTLAILDGQLIRIGKHIYVVPLVSIYESLQVPTNRINRLSDGHELIRLRDEYL EEEEEEEEEEEEECCCEEEECCEEEEEEHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH PVIKMYREFNHDADAREIKDGLVMVVDHNNEKAGLLVDELLAQQQVVIKSLEENYTRIPG HHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ISGATILGDGTVALIIDVAGLVKLAGIGSSNEHAA CCCCEEECCCCEEEHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDIDLSQFSQVFFEESIEGLAIMESELLKLDVAAPDPETINTIFRAAHSIKGGSATFGFM CCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHH QVANYTHLLETLLDEIRDGRRQMQPDHVDMLLLSVDLLRGMFEALMSQAEFNDPKLPELE HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE LRLNNTLANQPSQTQSISPPQATMASDSKTLCWQIDFKAGADIMRCGNDPMLMFAELASK EEECCHHCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCHHHHCCCCCHHHHHHHHCC GTLTAELLPVSFPAWDDFDPEACYLHWRLRLITDEPLEKLKEVFEWVEDECEISYQQTAA CCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHCC APSADTSTEMLSPSPQSEVDPPVAAPDVIALTPQVQALATDKAVASQKQSAAAAKSGESS CCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCC SIRVSTEKIDMLINMVGELVITQAMLGQIGQQDEINQESLLLLQQGLEQLASHTRDLQES EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VMQIRMLPISFAFNRFPRLVRDIGQQLGKKVELILKGEDTELDKTVLEKIVDPMVHLVRN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH SLDHGLESPEARLAQGKSETGTIMLNAYHQGGCIIIEIADDGAGLNTHKILEKARQKGLV HHHCCCCCCHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCC GAEEELSEEAIHQLIFRPGFSTADAVSDLSGRGVGMDVVKRNIHELNGSIELKSEAGKGS CCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCC RFTIRLPLTLAILDGQLIRIGKHIYVVPLVSIYESLQVPTNRINRLSDGHELIRLRDEYL EEEEEEEEEEEEECCCEEEECCEEEEEEHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH PVIKMYREFNHDADAREIKDGLVMVVDHNNEKAGLLVDELLAQQQVVIKSLEENYTRIPG HHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ISGATILGDGTVALIIDVAGLVKLAGIGSSNEHAA CCCCEEECCCCEEEHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2002011; 9097040; 9278503; 3510184; 2832069; 2068106; 8555213; 8639521; 9020767; 9437425; 9636149 [H]