| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cheY [H]
Identifier: 119776626
GI number: 119776626
Start: 4124263
End: 4124625
Strand: Direct
Name: cheY [H]
Synonym: Sama_3494
Alternate gene names: 119776626
Gene position: 4124263-4124625 (Clockwise)
Preceding gene: 119776625
Following gene: 119776627
Centisome position: 95.78
GC content: 49.59
Gene sequence:
>363_bases ATGAAGAAGATTCTTGCCGTTGATGATTCGGCCTCAATGAGACAAATGGTGGGGTTTACGCTGAAAACCGCCGGATTTGA TGTCACCGAGGCGTGCAATGGCGATGAAGCCTTAAAAGCAGCTCAGGCCGGTCAGTACGATCTGGTTATTTCGGATGTAA ATATGCCCGTGATGGACGGCATAACCCTTATCCGTAACCTGCGAACCCTCCCTGCTTACAAATTTACGCCATTGTTGATG CTGACCACAGAATCAGGTGGCGATAAAAAGCAGGAAGGACGGGCAGCAGGAGCTACAGGTTGGATTGTGAAACCCTTTAA TCCGGAACAGTTGCTGGCCACAGTGCGCAAAGTGTTGGGATAA
Upstream 100 bases:
>100_bases TGAACTGGAAAGGAATAACTACAGAACTTGTCGCTCAGTTCAAGCAGATGGGCATGCAACTTCCGGGAATAACCAGTCAA GCGTAAAAGGACAACAACCT
Downstream 100 bases:
>100_bases CCCGCAGAGAGACTAGGGAATGGACATAGATCTTAGCCAATTCAGTCAGGTGTTCTTCGAGGAAAGTATCGAGGGCCTGG CGATTATGGAGTCTGAGCTG
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MKKILAVDDSASMRQMVGFTLKTAGFDVTEACNGDEALKAAQAGQYDLVISDVNMPVMDGITLIRNLRTLPAYKFTPLLM LTTESGGDKKQEGRAAGATGWIVKPFNPEQLLATVRKVLG
Sequences:
>Translated_120_residues MKKILAVDDSASMRQMVGFTLKTAGFDVTEACNGDEALKAAQAGQYDLVISDVNMPVMDGITLIRNLRTLPAYKFTPLLM LTTESGGDKKQEGRAAGATGWIVKPFNPEQLLATVRKVLG >Mature_120_residues MKKILAVDDSASMRQMVGFTLKTAGFDVTEACNGDEALKAAQAGQYDLVISDVNMPVMDGITLIRNLRTLPAYKFTPLLM LTTESGGDKKQEGRAAGATGWIVKPFNPEQLLATVRKVLG
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. In its active (phosphorylated or acetylated) form, CheY exhibits enhanced binding to a switch component, FliM, at the flagellar motor which induces a change f
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=42.3728813559322, Blast_Score=88, Evalue=1e-19, Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=33.0508474576271, Blast_Score=76, Evalue=7e-16, Organism=Escherichia coli, GI87082012, Length=117, Percent_Identity=35.042735042735, Blast_Score=69, Evalue=7e-14, Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=32.4786324786325, Blast_Score=68, Evalue=2e-13, Organism=Escherichia coli, GI1786784, Length=117, Percent_Identity=36.7521367521368, Blast_Score=67, Evalue=2e-13, Organism=Escherichia coli, GI1788713, Length=108, Percent_Identity=35.1851851851852, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1790437, Length=118, Percent_Identity=33.8983050847458, Blast_Score=64, Evalue=3e-12, Organism=Escherichia coli, GI1788550, Length=119, Percent_Identity=30.2521008403361, Blast_Score=64, Evalue=3e-12, Organism=Escherichia coli, GI1790299, Length=116, Percent_Identity=29.3103448275862, Blast_Score=62, Evalue=9e-12, Organism=Escherichia coli, GI1788394, Length=117, Percent_Identity=29.0598290598291, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1790863, Length=118, Percent_Identity=33.0508474576271, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1789149, Length=108, Percent_Identity=28.7037037037037, Blast_Score=60, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 12933; Mature: 12933
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILAVDDSASMRQMVGFTLKTAGFDVTEACNGDEALKAAQAGQYDLVISDVNMPVMDG CCCEEECCCCHHHHHHHCCHHHCCCCCHHHCCCCHHHHHHHCCCCEEEEEECCCCCHHHH ITLIRNLRTLPAYKFTPLLMLTTESGGDKKQEGRAAGATGWIVKPFNPEQLLATVRKVLG HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHC >Mature Secondary Structure MKKILAVDDSASMRQMVGFTLKTAGFDVTEACNGDEALKAAQAGQYDLVISDVNMPVMDG CCCEEECCCCHHHHHHHCCHHHCCCCCHHHCCCCHHHHHHHCCCCEEEEEECCCCCHHHH ITLIRNLRTLPAYKFTPLLMLTTESGGDKKQEGRAAGATGWIVKPFNPEQLLATVRKVLG HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]