Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776619

Identifier: 119776619

GI number: 119776619

Start: 4119723

End: 4119938

Strand: Reverse

Name: 119776619

Synonym: Sama_3487

Alternate gene names: NA

Gene position: 4119938-4119723 (Counterclockwise)

Preceding gene: 119776632

Following gene: 119776612

Centisome position: 95.68

GC content: 54.63

Gene sequence:

>216_bases
ATGACCGCCTTTGTGTTTAAATCTGTGCTGGTATTGCTGCTGCTTTTTATCATCTTCAATCTCGGCCGCGCCCTTTACAT
CATGGTCAAGGGGGATGGCAGTGTCCCCATGAGCCGCTATTTGGGCCGCCGTGTCGCCCTGTCTGCCTTGGTCATACTCT
TGCTGCTGGTGGCTTTGGCACTGGGGTGGATAACACCTCACCCCAGGCCTTACTGA

Upstream 100 bases:

>100_bases
GAGTTGCCAAAATCCCAACTTGACGAGCACCGCAAACAGCACCAGAGTGAATAACATCAGCAACTTGCCGGCATACCCCG
GCCTGGAATCCGGAGAATCC

Downstream 100 bases:

>100_bases
ACTTACAGCACGTAAACAAATACAAACAGGCAGAGCCAAACCACATCCACAAAGTGCCAGTACCAGCTGCCAGCTTGAAA
CGCGAACTGGTTATCGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MTAFVFKSVLVLLLLFIIFNLGRALYIMVKGDGSVPMSRYLGRRVALSALVILLLLVALALGWITPHPRPY

Sequences:

>Translated_71_residues
MTAFVFKSVLVLLLLFIIFNLGRALYIMVKGDGSVPMSRYLGRRVALSALVILLLLVALALGWITPHPRPY
>Mature_70_residues
TAFVFKSVLVLLLLFIIFNLGRALYIMVKGDGSVPMSRYLGRRVALSALVILLLLVALALGWITPHPRPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7900; Mature: 7769

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFVFKSVLVLLLLFIIFNLGRALYIMVKGDGSVPMSRYLGRRVALSALVILLLLVALA
CHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGWITPHPRPY
HHHCCCCCCCC
>Mature Secondary Structure 
TAFVFKSVLVLLLLFIIFNLGRALYIMVKGDGSVPMSRYLGRRVALSALVILLLLVALA
HHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGWITPHPRPY
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA