The gene/protein map for NC_008048 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776437

Identifier: 119776437

GI number: 119776437

Start: 3931898

End: 3932545

Strand: Reverse

Name: 119776437

Synonym: Sama_3305

Alternate gene names: NA

Gene position: 3932545-3931898 (Counterclockwise)

Preceding gene: 119776438

Following gene: 119776433

Centisome position: 91.32

GC content: 30.4

Gene sequence:

>648_bases
ATGAGTTGTTATGTATATAGGGATGTTCCTGATTATTTTATATCTGGATTTTGTGCAGTAAGAAATTCATGTGATAATTT
CCTTAATGTGCTAAAAGTTGTAGAGATTGTAAATAATTCTGTTCCAATAATAGATGAGGAATATCCGAATGATTTTGATT
TGGTTATTTTTTCTGGAGATTTTAAAAGAGCAATAGTTAAGAAGAATGATGGGTATTTTTCAATGGCCATCCCATTTCAA
GTAATTTTTGATAATGAAAGATTACATTTTAATTGTGATAGCATAGGTGAAGAAGTCGATGGTAGATTCATTTCTATTAT
GAGGAATGCTACGAGCACTTTAAAAGAAGTCAGCTTCTCACATGAAGATGTTATATACTCGATAATGGAAAATTTTAGAT
TAGAACTCGAAGAAGCTATGTGCTATTTTGACGTTTTTGCTTCTTTATTAACTGATGATCATGGATATTTTCGTTTTGAT
GATGATCAAGATAACGAAAATGGTAGAATTCATCCAAGGTATCATTTTGATATTTTTTATAAAAATAGCTCATCAATTAA
AATTGGAATGGATCGAATTGCTGATCCCGATTGTTTATATGCGCTTATCGATGGTTCAAGAGAGAAAAAATATCTCTCTA
ACGGGTGA

Upstream 100 bases:

>100_bases
AATTAATAAACAGAATTACAACGATTACGGGTGATGATGACTATGATCAGGGTTATTTAGATTCACTTCTACAGCTTGAA
TATGAAAGGAATGTCAAGTT

Downstream 100 bases:

>100_bases
TATATGAGCGAATAACTAAGACATATATGGACGCTCCACTGAACACAAGGTGTTGCCCTCGGATAGCCATCCGATGTCTG
CCTTGTCTGTCATCCTGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSCYVYRDVPDYFISGFCAVRNSCDNFLNVLKVVEIVNNSVPIIDEEYPNDFDLVIFSGDFKRAIVKKNDGYFSMAIPFQ
VIFDNERLHFNCDSIGEEVDGRFISIMRNATSTLKEVSFSHEDVIYSIMENFRLELEEAMCYFDVFASLLTDDHGYFRFD
DDQDNENGRIHPRYHFDIFYKNSSSIKIGMDRIADPDCLYALIDGSREKKYLSNG

Sequences:

>Translated_215_residues
MSCYVYRDVPDYFISGFCAVRNSCDNFLNVLKVVEIVNNSVPIIDEEYPNDFDLVIFSGDFKRAIVKKNDGYFSMAIPFQ
VIFDNERLHFNCDSIGEEVDGRFISIMRNATSTLKEVSFSHEDVIYSIMENFRLELEEAMCYFDVFASLLTDDHGYFRFD
DDQDNENGRIHPRYHFDIFYKNSSSIKIGMDRIADPDCLYALIDGSREKKYLSNG
>Mature_214_residues
SCYVYRDVPDYFISGFCAVRNSCDNFLNVLKVVEIVNNSVPIIDEEYPNDFDLVIFSGDFKRAIVKKNDGYFSMAIPFQV
IFDNERLHFNCDSIGEEVDGRFISIMRNATSTLKEVSFSHEDVIYSIMENFRLELEEAMCYFDVFASLLTDDHGYFRFDD
DQDNENGRIHPRYHFDIFYKNSSSIKIGMDRIADPDCLYALIDGSREKKYLSNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25017; Mature: 24886

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCYVYRDVPDYFISGFCAVRNSCDNFLNVLKVVEIVNNSVPIIDEEYPNDFDLVIFSGD
CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCC
FKRAIVKKNDGYFSMAIPFQVIFDNERLHFNCDSIGEEVDGRFISIMRNATSTLKEVSFS
CEEEEEECCCCEEEEEEEEEEEEECCEEEEEHHHHCHHHCCHHHHHHHHHHHHHHHHCCC
HEDVIYSIMENFRLELEEAMCYFDVFASLLTDDHGYFRFDDDQDNENGRIHPRYHFDIFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEECEEEEEEEEE
KNSSSIKIGMDRIADPDCLYALIDGSREKKYLSNG
ECCCCEEECHHHCCCCCCEEEEECCCCCCHHCCCC
>Mature Secondary Structure 
SCYVYRDVPDYFISGFCAVRNSCDNFLNVLKVVEIVNNSVPIIDEEYPNDFDLVIFSGD
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCC
FKRAIVKKNDGYFSMAIPFQVIFDNERLHFNCDSIGEEVDGRFISIMRNATSTLKEVSFS
CEEEEEECCCCEEEEEEEEEEEEECCEEEEEHHHHCHHHCCHHHHHHHHHHHHHHHHCCC
HEDVIYSIMENFRLELEEAMCYFDVFASLLTDDHGYFRFDDDQDNENGRIHPRYHFDIFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEECEEEEEEEEE
KNSSSIKIGMDRIADPDCLYALIDGSREKKYLSNG
ECCCCEEECHHHCCCCCCEEEEECCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA