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The map label for this gene is 119776438

Identifier: 119776438

GI number: 119776438

Start: 3932542

End: 3934530

Strand: Reverse

Name: 119776438

Synonym: Sama_3306

Alternate gene names: NA

Gene position: 3934530-3932542 (Counterclockwise)

Preceding gene: 119776439

Following gene: 119776437

Centisome position: 91.37

GC content: 32.23

Gene sequence:

>1989_bases
ATGTCTGGTTACTGCTTTTTTGCACCGGAGACACAAGAATTAGCCGAGAAAGCTGGCATCAAAGAAAAAATAGAGGATTA
TGCTGAAGCTCAAAGAAAGCAGACATATGTTTTAGTTAAACCGTTATCTAAAGACGATTCAGAATATGATTATGAATGTG
CTGTAGTAATATTTTCATCAGGTTCTAGACCTTGCTTTATTGATCTGGACGATAATAAAGATAAATTTGATGATTATATT
GAAGACTTCTTTGATGATATTTCATTTTTGTCTGAAAAATTTAAATATAGGACAAAAATAGGAAGAAAAAAACATTGGAT
CGATTTATTTGATTGTTGTACAGCTGATGAGTTGGATTTAGCTTCTTTAAGTTTAGAAAAACCATCAGAAAAAAGAGTTT
CAGATCTATTAACCTCTTTGGTTATAGGTAGTGTTAACGATGTTGATAAAATTAACATCGAAGCAGAAAGTCTTTTAGAG
TTGGTAAAGTCAAAAATTGTTTTGTTTGACACGGATCAAACTGGTTTTGTATTTAAATCCAATGCTGGGAAAAAATATGT
GATTCAAGGTTTAGCTGGTTCAGGTAAAACTGAATTACTATTGCATAAGTTAAAGGAAATATATTCTTCAGAACAAGATG
CTCGTATAGCATTTACTTGCTACAATAAAATATTGGCATCATCAATGAAAAGTAGAATTCCAGATTTTTTTGACTTTATG
AGAGTTGAGCGTCAAATTGATTGGGATAATAAACTATTCTGCTTCCATGCATGGGGAAGTTCAAGAGATCCTTATTCTGG
AATGTATAGATATATATGTCATAGCTATGGCATACCTTTTGGTAATATGCAAGCAGGAAGTTTTGAATATTTATGTGAGA
AAGCTATTGAAGAAATTAAGTCAATTCCTTCATCAGAATTTGAATTCATTTTCGATTATGTATTCATTGATGAAAGCCAA
GACTTCTCTGAGAGTTTTATAGATTTATGCGATCTTGTAACTGAAAAGAAACTTTTTGTCGCAGGTGATGTCTTTCAGAA
TATATTTAGACCAATTGATGCATCTGTTGCTCGTTCAGATTTAGTTCTTAAAAAATGCTATCGGACAGATCCTCGGAACC
TAATGTTTTCCCATGCTTTAGGAATGGGTTTATATGAACAGCCAGTATTAAGATGGTTAAAGCCTCATGAGTGGGAAGCT
TGCGGCTACAATTATACAGTGCAAAAAAATAATAGGGCTATTGTAAATAGAGATCCATTAAGAAGATTTGAAGATATGCC
TGATGACTTTAGCTCTACTTATATACATACTATTAGAAACAGAGAGTCAATTTCTCTTTCAATTTTCGAAGTGATACAAG
AAATTATTGGTCGGCATGAAACGATAGCTGAAGGGGATATAGCAGTAATTTTTTTAGACTCACAAAAGTATATTTATGAT
GCTATCTCACAATTAAAGAGCCTAGTTGCAGCTAGACTGGGTTGGAAAGCAAATGTTTCATTTGAAACCAAAAGAAGCGA
TCCTGATAGATTTTTTATTTCAAATATTAATAATGCAAAAGGATTAGAGTTTCCATTTGTTATCTGTTTTTCATTAGATC
TTCATAGAACAAGAACTTTCCGTAATGCGCTTTACACAATGATGGCTAGATCCTTTTTAGAAAGCCATTTAGTTGTAAAT
GAGTTATACAATGCTGAACTTGTAAAAGTATTGAATGATGGACTTGACTGTATAAACACAAATGGATATATGGATATTAG
AATTCCACCAGATGATGAGATCGCTAATCAAGACGATTTGATTATTTGGGAGGATAAATTATCAATAGAAGATTATGTGA
GAAGTTGGTGTAAGGAAAGAAAAGCAACTCCAAGATTAGTTGGTAAATTAATAAACAGAATTACAACGATTACGGGTGAT
GATGACTATGATCAGGGTTATTTAGATTCACTTCTACAGCTTGAATATGAAAGGAATGTCAAGTTATGA

Upstream 100 bases:

>100_bases
AATGCAATGTGTATTGCTCTGGATCGAATCAAAATCAATTAGATAAGCCACTTTCTAAAGCTGATAGAAAATAAACTATT
TTTAAATAAGGGGTTTTATT

Downstream 100 bases:

>100_bases
GTTGTTATGTATATAGGGATGTTCCTGATTATTTTATATCTGGATTTTGTGCAGTAAGAAATTCATGTGATAATTTCCTT
AATGTGCTAAAAGTTGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MSGYCFFAPETQELAEKAGIKEKIEDYAEAQRKQTYVLVKPLSKDDSEYDYECAVVIFSSGSRPCFIDLDDNKDKFDDYI
EDFFDDISFLSEKFKYRTKIGRKKHWIDLFDCCTADELDLASLSLEKPSEKRVSDLLTSLVIGSVNDVDKINIEAESLLE
LVKSKIVLFDTDQTGFVFKSNAGKKYVIQGLAGSGKTELLLHKLKEIYSSEQDARIAFTCYNKILASSMKSRIPDFFDFM
RVERQIDWDNKLFCFHAWGSSRDPYSGMYRYICHSYGIPFGNMQAGSFEYLCEKAIEEIKSIPSSEFEFIFDYVFIDESQ
DFSESFIDLCDLVTEKKLFVAGDVFQNIFRPIDASVARSDLVLKKCYRTDPRNLMFSHALGMGLYEQPVLRWLKPHEWEA
CGYNYTVQKNNRAIVNRDPLRRFEDMPDDFSSTYIHTIRNRESISLSIFEVIQEIIGRHETIAEGDIAVIFLDSQKYIYD
AISQLKSLVAARLGWKANVSFETKRSDPDRFFISNINNAKGLEFPFVICFSLDLHRTRTFRNALYTMMARSFLESHLVVN
ELYNAELVKVLNDGLDCINTNGYMDIRIPPDDEIANQDDLIIWEDKLSIEDYVRSWCKERKATPRLVGKLINRITTITGD
DDYDQGYLDSLLQLEYERNVKL

Sequences:

>Translated_662_residues
MSGYCFFAPETQELAEKAGIKEKIEDYAEAQRKQTYVLVKPLSKDDSEYDYECAVVIFSSGSRPCFIDLDDNKDKFDDYI
EDFFDDISFLSEKFKYRTKIGRKKHWIDLFDCCTADELDLASLSLEKPSEKRVSDLLTSLVIGSVNDVDKINIEAESLLE
LVKSKIVLFDTDQTGFVFKSNAGKKYVIQGLAGSGKTELLLHKLKEIYSSEQDARIAFTCYNKILASSMKSRIPDFFDFM
RVERQIDWDNKLFCFHAWGSSRDPYSGMYRYICHSYGIPFGNMQAGSFEYLCEKAIEEIKSIPSSEFEFIFDYVFIDESQ
DFSESFIDLCDLVTEKKLFVAGDVFQNIFRPIDASVARSDLVLKKCYRTDPRNLMFSHALGMGLYEQPVLRWLKPHEWEA
CGYNYTVQKNNRAIVNRDPLRRFEDMPDDFSSTYIHTIRNRESISLSIFEVIQEIIGRHETIAEGDIAVIFLDSQKYIYD
AISQLKSLVAARLGWKANVSFETKRSDPDRFFISNINNAKGLEFPFVICFSLDLHRTRTFRNALYTMMARSFLESHLVVN
ELYNAELVKVLNDGLDCINTNGYMDIRIPPDDEIANQDDLIIWEDKLSIEDYVRSWCKERKATPRLVGKLINRITTITGD
DDYDQGYLDSLLQLEYERNVKL
>Mature_661_residues
SGYCFFAPETQELAEKAGIKEKIEDYAEAQRKQTYVLVKPLSKDDSEYDYECAVVIFSSGSRPCFIDLDDNKDKFDDYIE
DFFDDISFLSEKFKYRTKIGRKKHWIDLFDCCTADELDLASLSLEKPSEKRVSDLLTSLVIGSVNDVDKINIEAESLLEL
VKSKIVLFDTDQTGFVFKSNAGKKYVIQGLAGSGKTELLLHKLKEIYSSEQDARIAFTCYNKILASSMKSRIPDFFDFMR
VERQIDWDNKLFCFHAWGSSRDPYSGMYRYICHSYGIPFGNMQAGSFEYLCEKAIEEIKSIPSSEFEFIFDYVFIDESQD
FSESFIDLCDLVTEKKLFVAGDVFQNIFRPIDASVARSDLVLKKCYRTDPRNLMFSHALGMGLYEQPVLRWLKPHEWEAC
GYNYTVQKNNRAIVNRDPLRRFEDMPDDFSSTYIHTIRNRESISLSIFEVIQEIIGRHETIAEGDIAVIFLDSQKYIYDA
ISQLKSLVAARLGWKANVSFETKRSDPDRFFISNINNAKGLEFPFVICFSLDLHRTRTFRNALYTMMARSFLESHLVVNE
LYNAELVKVLNDGLDCINTNGYMDIRIPPDDEIANQDDLIIWEDKLSIEDYVRSWCKERKATPRLVGKLINRITTITGDD
DYDQGYLDSLLQLEYERNVKL

Specific function: Unknown

COG id: COG3972

COG function: function code R; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76677; Mature: 76545

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYCFFAPETQELAEKAGIKEKIEDYAEAQRKQTYVLVKPLSKDDSEYDYECAVVIFSS
CCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEC
GSRPCFIDLDDNKDKFDDYIEDFFDDISFLSEKFKYRTKIGRKKHWIDLFDCCTADELDL
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCH
ASLSLEKPSEKRVSDLLTSLVIGSVNDVDKINIEAESLLELVKSKIVLFDTDQTGFVFKS
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHCCEEEEECCCCCEEEEC
NAGKKYVIQGLAGSGKTELLLHKLKEIYSSEQDARIAFTCYNKILASSMKSRIPDFFDFM
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHH
RVERQIDWDNKLFCFHAWGSSRDPYSGMYRYICHSYGIPFGNMQAGSFEYLCEKAIEEIK
HHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
SIPSSEFEFIFDYVFIDESQDFSESFIDLCDLVTEKKLFVAGDVFQNIFRPIDASVARSD
CCCCCCHHEEEEEEEECCCCCHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHH
LVLKKCYRTDPRNLMFSHALGMGLYEQPVLRWLKPHEWEACGYNYTVQKNNRAIVNRDPL
HHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCCHH
RRFEDMPDDFSSTYIHTIRNRESISLSIFEVIQEIIGRHETIAEGDIAVIFLDSQKYIYD
HHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEECCCCEEEEEECCCHHHHH
AISQLKSLVAARLGWKANVSFETKRSDPDRFFISNINNAKGLEFPFVICFSLDLHRTRTF
HHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHH
RNALYTMMARSFLESHLVVNELYNAELVKVLNDGLDCINTNGYMDIRIPPDDEIANQDDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCE
IIWEDKLSIEDYVRSWCKERKATPRLVGKLINRITTITGDDDYDQGYLDSLLQLEYERNV
EEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCC
KL
CC
>Mature Secondary Structure 
SGYCFFAPETQELAEKAGIKEKIEDYAEAQRKQTYVLVKPLSKDDSEYDYECAVVIFSS
CCEEEECCCHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEC
GSRPCFIDLDDNKDKFDDYIEDFFDDISFLSEKFKYRTKIGRKKHWIDLFDCCTADELDL
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCH
ASLSLEKPSEKRVSDLLTSLVIGSVNDVDKINIEAESLLELVKSKIVLFDTDQTGFVFKS
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHCCEEEEECCCCCEEEEC
NAGKKYVIQGLAGSGKTELLLHKLKEIYSSEQDARIAFTCYNKILASSMKSRIPDFFDFM
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHH
RVERQIDWDNKLFCFHAWGSSRDPYSGMYRYICHSYGIPFGNMQAGSFEYLCEKAIEEIK
HHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
SIPSSEFEFIFDYVFIDESQDFSESFIDLCDLVTEKKLFVAGDVFQNIFRPIDASVARSD
CCCCCCHHEEEEEEEECCCCCHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHH
LVLKKCYRTDPRNLMFSHALGMGLYEQPVLRWLKPHEWEACGYNYTVQKNNRAIVNRDPL
HHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCCHH
RRFEDMPDDFSSTYIHTIRNRESISLSIFEVIQEIIGRHETIAEGDIAVIFLDSQKYIYD
HHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEECCCCEEEEEECCCHHHHH
AISQLKSLVAARLGWKANVSFETKRSDPDRFFISNINNAKGLEFPFVICFSLDLHRTRTF
HHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHH
RNALYTMMARSFLESHLVVNELYNAELVKVLNDGLDCINTNGYMDIRIPPDDEIANQDDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCE
IIWEDKLSIEDYVRSWCKERKATPRLVGKLINRITTITGDDDYDQGYLDSLLQLEYERNV
EEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCC
KL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA