| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ilvM [H]
Identifier: 119776412
GI number: 119776412
Start: 3896663
End: 3896914
Strand: Reverse
Name: ilvM [H]
Synonym: Sama_3280
Alternate gene names: 119776412
Gene position: 3896914-3896663 (Counterclockwise)
Preceding gene: 119776413
Following gene: 119776411
Centisome position: 90.5
GC content: 55.56
Gene sequence:
>252_bases ATGAACCATAATCTGGAAGTCACCATGGCACAGCGTCCCGAAGTGGTTGAGCGTGTGCTGAGGGTTGTTCGCCACAGGGG ATTTACCCTGACCAACATGAATATGCGCCTCACTGATGAAAGCGTCTATCTGTCACTGTCGGTGTCCAGCGAGCGGGCGA TTGAACTTTTGAGCAACCAGCTGTGTAAGCTGGTGGATGTGACCGGTTGCCATGTGATGCAGCCAGCCATGCCGCAGTCG GCCAGCGCCTGA
Upstream 100 bases:
>100_bases ACCTCTTGCACGTGGCCATAGATGATGCCTTTAACGTTTGGCCCCTGGTTCCGCCGGGTGCCTCCAACAGCGATATGATG GAAGAAATGGAGAGAAGCAC
Downstream 100 bases:
>100_bases GGCAAGTAGCGGATCTCTGTGCCAGTTCACAGCACATAAGTTAGATATTCTGTTTCCATCGAAAAATTGAAAAAGCAAAG GAAGTTTCAATGGCTAAATT
Product: acetolactate synthase 2 regulatory subunit
Products: NA
Alternate protein names: ALS-II; Acetohydroxy-acid synthase II small subunit; AHAS-II [H]
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MNHNLEVTMAQRPEVVERVLRVVRHRGFTLTNMNMRLTDESVYLSLSVSSERAIELLSNQLCKLVDVTGCHVMQPAMPQS ASA
Sequences:
>Translated_83_residues MNHNLEVTMAQRPEVVERVLRVVRHRGFTLTNMNMRLTDESVYLSLSVSSERAIELLSNQLCKLVDVTGCHVMQPAMPQS ASA >Mature_83_residues MNHNLEVTMAQRPEVVERVLRVVRHRGFTLTNMNMRLTDESVYLSLSVSSERAIELLSNQLCKLVDVTGCHVMQPAMPQS ASA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG3978
COG function: function code S; Acetolactate synthase (isozyme II), small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790204, Length=76, Percent_Identity=44.7368421052632, Blast_Score=64, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 9341; Mature: 9341
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHNLEVTMAQRPEVVERVLRVVRHRGFTLTNMNMRLTDESVYLSLSVSSERAIELLSNQ CCCCEEEEECCCCHHHHHHHHHHHHCCCEEECCEEEEECCEEEEEEECCCHHHHHHHHHH LCKLVDVTGCHVMQPAMPQSASA HHHHHCCCCCEEECCCCCCCCCC >Mature Secondary Structure MNHNLEVTMAQRPEVVERVLRVVRHRGFTLTNMNMRLTDESVYLSLSVSSERAIELLSNQ CCCCEEEEECCCCHHHHHHHHHHHHCCCEEECCEEEEECCEEEEEEECCCHHHHHHHHHH LCKLVDVTGCHVMQPAMPQSASA HHHHHCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]