| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776239
Identifier: 119776239
GI number: 119776239
Start: 3679164
End: 3679691
Strand: Reverse
Name: 119776239
Synonym: Sama_3107
Alternate gene names: NA
Gene position: 3679691-3679164 (Counterclockwise)
Preceding gene: 119776240
Following gene: 119776236
Centisome position: 85.45
GC content: 58.33
Gene sequence:
>528_bases GTGGGAGGGGGGTTAGTGTTGAAAAATAAAATGGCAGTCATAGTTGCCGGTCTGGGTCTGCTTTTGAGCGTGCTCGCCAG CCCCGGCTGGGCCGCCGATATCTGGTTGTTTCGCCACGGTGAAAAGGCGCCGGGAAAGGATCCTGCGCTGACCGAAGCGG GGCAGGCCCGGGCACAGCGTATTGCCGGGCTTATTCTCAGGGCGCCATCGACCGGCGATAACATCCTCCTCTATTCCACC GATTATCGCCGCACCCAGGAAACCATAGCACCGCTGGCCGAGGCGACAGGGGTGAAGGTGCAGAGTTACGACCCTGCCGA CATGGCACAGTTGGCAGCCAAGATCAGGGTGCTCGATGGCACAGTCGTCGTGGCCGGTCACAGCAACACCACGCCAGAAC TACTCAAACACCTGACCGGCATTGAACGCGACATTCCCGAAGACAGATTTGATGTGCTCTATCATCTTGTGCCTGCTGCA CAAGGCTTTATCCTGCAGGAGCTGTCATCGGATACGTCTGAGCACTGA
Upstream 100 bases:
>100_bases GACGTTAGGCCAAGCCGTTAAGCTTCGAGGCTGCACTCACTGACGAGGGCAGCCTTGTTTTTAGGCTTGGGATGGGTCGA ACACGGCTTGGAGTGGCGAT
Downstream 100 bases:
>100_bases TCCTTGCTTAAGCCTTGGTCTGGTCAGTTATTTGCCTTATCTGCGTCTTAAGTGATTGCCTGCGTTTTGCCAGTTGAATC ATCTTCAGCCCTTCCCAGAG
Product: putative phosphohistidine phosphatase, SixA
Products: NA
Alternate protein names: Phosphohistidine Phosphatase SixA; Phosphoglycerate Mutase Family Protein; Brocificity Phosphatase PhoE-Like
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MGGGLVLKNKMAVIVAGLGLLLSVLASPGWAADIWLFRHGEKAPGKDPALTEAGQARAQRIAGLILRAPSTGDNILLYST DYRRTQETIAPLAEATGVKVQSYDPADMAQLAAKIRVLDGTVVVAGHSNTTPELLKHLTGIERDIPEDRFDVLYHLVPAA QGFILQELSSDTSEH
Sequences:
>Translated_175_residues MGGGLVLKNKMAVIVAGLGLLLSVLASPGWAADIWLFRHGEKAPGKDPALTEAGQARAQRIAGLILRAPSTGDNILLYST DYRRTQETIAPLAEATGVKVQSYDPADMAQLAAKIRVLDGTVVVAGHSNTTPELLKHLTGIERDIPEDRFDVLYHLVPAA QGFILQELSSDTSEH >Mature_174_residues GGGLVLKNKMAVIVAGLGLLLSVLASPGWAADIWLFRHGEKAPGKDPALTEAGQARAQRIAGLILRAPSTGDNILLYSTD YRRTQETIAPLAEATGVKVQSYDPADMAQLAAKIRVLDGTVVVAGHSNTTPELLKHLTGIERDIPEDRFDVLYHLVPAAQ GFILQELSSDTSEH
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18705; Mature: 18573
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGGLVLKNKMAVIVAGLGLLLSVLASPGWAADIWLFRHGEKAPGKDPALTEAGQARAQR CCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH IAGLILRAPSTGDNILLYSTDYRRTQETIAPLAEATGVKVQSYDPADMAQLAAKIRVLDG HHHHEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHEEECC TVVVAGHSNTTPELLKHLTGIERDIPEDRFDVLYHLVPAAQGFILQELSSDTSEH EEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GGGLVLKNKMAVIVAGLGLLLSVLASPGWAADIWLFRHGEKAPGKDPALTEAGQARAQR CCCEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH IAGLILRAPSTGDNILLYSTDYRRTQETIAPLAEATGVKVQSYDPADMAQLAAKIRVLDG HHHHEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHEEECC TVVVAGHSNTTPELLKHLTGIERDIPEDRFDVLYHLVPAAQGFILQELSSDTSEH EEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA