Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776236

Identifier: 119776236

GI number: 119776236

Start: 3677776

End: 3678066

Strand: Reverse

Name: 119776236

Synonym: Sama_3104

Alternate gene names: NA

Gene position: 3678066-3677776 (Counterclockwise)

Preceding gene: 119776239

Following gene: 119776234

Centisome position: 85.41

GC content: 54.64

Gene sequence:

>291_bases
TTGCCGTTTTTTATCGCTTTCTACAGCGTATTTTGGAGTCTTCCCATGGCTTGCAATGATTGTGACTCTTCCGTTTTTCG
CCAGAAGATTGGCCGATGCAAGCGCTGCATGCTGATGCTGACGGCGCTTTGCATTCTGGGCTGGCCGCTTTGGTATCTGC
TCTTTTCGGAGCAAATCACCAGTGTGGCGTCCCTGGCGCTGCTGCTATTTTGTTTCGCCTGGACTGGCCTGCTGGCGCTG
CACCTGCTTGTGTGGGCATGGCGGACGCTTTGGGGCCGTGAACATCAGTGA

Upstream 100 bases:

>100_bases
GCAGCGACGAAAGCTGTATAGCAGGGCGGAGTCTGTCATGTTTAAACGCTGGCAATGAATCTGGCCCCACTTTAACACGG
GTCATGGTTGCGGCGGTGCT

Downstream 100 bases:

>100_bases
CCACACCATTGGGATTCACAGGGGATGCCGTCGTTGTCACCGTCCATTTTCGTGCCCGGACAATTGTTTTGATAGAAGGT
GGCTTCGGCACAGGAGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MPFFIAFYSVFWSLPMACNDCDSSVFRQKIGRCKRCMLMLTALCILGWPLWYLLFSEQITSVASLALLLFCFAWTGLLAL
HLLVWAWRTLWGREHQ

Sequences:

>Translated_96_residues
MPFFIAFYSVFWSLPMACNDCDSSVFRQKIGRCKRCMLMLTALCILGWPLWYLLFSEQITSVASLALLLFCFAWTGLLAL
HLLVWAWRTLWGREHQ
>Mature_95_residues
PFFIAFYSVFWSLPMACNDCDSSVFRQKIGRCKRCMLMLTALCILGWPLWYLLFSEQITSVASLALLLFCFAWTGLLALH
LLVWAWRTLWGREHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11256; Mature: 11124

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFFIAFYSVFWSLPMACNDCDSSVFRQKIGRCKRCMLMLTALCILGWPLWYLLFSEQIT
CCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVASLALLLFCFAWTGLLALHLLVWAWRTLWGREHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PFFIAFYSVFWSLPMACNDCDSSVFRQKIGRCKRCMLMLTALCILGWPLWYLLFSEQIT
CHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVASLALLLFCFAWTGLLALHLLVWAWRTLWGREHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA