| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776229
Identifier: 119776229
GI number: 119776229
Start: 3670826
End: 3671077
Strand: Direct
Name: 119776229
Synonym: Sama_3097
Alternate gene names: NA
Gene position: 3670826-3671077 (Clockwise)
Preceding gene: 119776225
Following gene: 119776230
Centisome position: 85.25
GC content: 54.37
Gene sequence:
>252_bases ATGATCATGTCCGCCACATACGAGACCCGGCGTCAGGAAGCCGTTATGGCCGTACTCGAAGGTGGCCGTTTGCCATCTGA AGTCGCCAGGGATCACGGGATTGCCAGCAAGACCCTGCTCAAATGGATCCGGGAGTCCCATCAATCCCGCAGTAGCCGTC GCTGCAAGCTCGAGCAGGAAATAGAAGCTCTTGAGATGAAATTGTCCGGACTGCGACAGGAAATCTCCAAACTACAAACG TTCAACGCTTGA
Upstream 100 bases:
>100_bases CTGTATTTAACCACTTGAAATCAGAGTGGCACTACATTGGGTCTGCTGGCGTCAGTCAGTGGGAATTAGGACGAGAGGTC AAATTCAGGAGGACAGGGTT
Downstream 100 bases:
>100_bases TTGATCTGTCTAAACCCACTGAGCGGTGAGGCAAGATAGCACCTCCGCGCCGTGTCAATCAGAGCAATCATCGCCCCGAT TCCGTCGAGTCGGGGTTATC
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MIMSATYETRRQEAVMAVLEGGRLPSEVARDHGIASKTLLKWIRESHQSRSSRRCKLEQEIEALEMKLSGLRQEISKLQT FNA
Sequences:
>Translated_83_residues MIMSATYETRRQEAVMAVLEGGRLPSEVARDHGIASKTLLKWIRESHQSRSSRRCKLEQEIEALEMKLSGLRQEISKLQT FNA >Mature_83_residues MIMSATYETRRQEAVMAVLEGGRLPSEVARDHGIASKTLLKWIRESHQSRSSRRCKLEQEIEALEMKLSGLRQEISKLQT FNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9517; Mature: 9517
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMSATYETRRQEAVMAVLEGGRLPSEVARDHGIASKTLLKWIRESHQSRSSRRCKLEQE CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH IEALEMKLSGLRQEISKLQTFNA HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIMSATYETRRQEAVMAVLEGGRLPSEVARDHGIASKTLLKWIRESHQSRSSRRCKLEQE CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH IEALEMKLSGLRQEISKLQTFNA HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA