| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is mgtE [H]
Identifier: 119776225
GI number: 119776225
Start: 3666933
End: 3668297
Strand: Direct
Name: mgtE [H]
Synonym: Sama_3093
Alternate gene names: 119776225
Gene position: 3666933-3668297 (Clockwise)
Preceding gene: 119776224
Following gene: 119776229
Centisome position: 85.16
GC content: 58.68
Gene sequence:
>1365_bases ATGGCTGTCGAACTTCTGGATAACGAGCAAACCGAGCTGTTGCTGAATCAGCTCAATGAGGCCCTGGGCAGCGGTATGTT TGTGCATGTGCGCCAGATGCTGCTGAACATGGCCGCATCCGATATCGCACTGGTGCTCGAATCCTCTCCTCCCCGTACCC GTCAGGTATTGTGGCAACTTATCGACCCCGAGCTTGCCGGTGAGGTCCTCGAAGAGCTCGGCGAAGAGATGAAAGACAAG TTTATCCGCCAGATGAGCCCCGAGCGCCTCGCCCGCGCTGCCGCAGGCCTGGACACCGACGATCTGGCCTACATACTGCG CTCCCTGCCCGACAGCCTCTACAAGCAGGTGCTGCAATCCATGTCGATTCAAGACCGCAGTCGCGCCGAGCAGGCACTCT CCTACCCGGAAGAAACCGCCGGCGGCATCATGAATACCGACACTGTGACCATACGCCCCGACGTGAATGTGGATGTGATA CTGCGCTACCTGCGCCAGCTCGGCTCGCTGCCCGAGGCCACCGATATGCTCTATGTGGTAGACAGACACGATGTGCTGCT CGGGGCGGTAAAGCTCACCGCCTTGCTCACCTGCAGCCCCTCCACACCCATTCGTGAGCTTATCGATGCCGACATTGAGG GGATTCCCGCGACCATGTCGGATACCGAGGCTGCGGCCCTGTTTGAGCGCCACGACTGGGTGTCAGCGCCCGTGATAGAC GCAGAGGGCAAGCTGCTGGGGCGAATCACCATCGACGATGTGGTGGATGTCATCCGGGAAGATGCCGAACACTCAATGAT GGGGATGGCCGGTATGGACGACGATGAAGACACCTTTGGTCCCGTCCTCAAAAGCAGTTTCCGGCGCTCATTGTGGCTCA CTGTTAATCTGTTCGCCGCCCTGCTGGCTGCGTCGGTCAGCAACCTGTTTGAATCGACCCTGGAGCAGTTCGCCACCATC GCCATCCTGATGACCATAGTGCCCAGCATGGGTGGCGTGGCCGGCAATCAGACCCTGGCATTGGTGATTAGGGGTATGGC GCTGGGCCACATAGGCCAGAGTAACTCCCGCTGGCTTATCGGCAAGGAGCTTGCCATCGGTTTTCTCAACGGCCTGCTTT GGTCAGTTCTGGTGTTTGTCGCTATCTGGCTGTGGAAAGGGGATCTGGCCCTGGGGGCACTGATAGGTGGGGCCATGTTG ATCAATATGACGGTGGCAGGACTCGCCGGTGCCAGCATTCCCTTGCTGCTTAAACGATTGAAAATAGACCCGGCATTGGC CGGTGGTATGGTGCTGACCACTGTCACCGACGTGATAGGGCTGTTTGCCTTTCTGGGCCTGGCGACGGCATTTTTAATGC GTTGA
Upstream 100 bases:
>100_bases ATCAACGCCCGCTTCGACGAAGACTGCTGACCCGGCTTCACTTCGTCCATCCCATTAAATTTGCTAATATATCCCCCAAT TCATCTCTTGGGGGAAAGCG
Downstream 100 bases:
>100_bases AGTGTCACTGGGCAGTGGGGTGTACTCCATGGCTTGCTGGCAATCACACCAGCACACCTGAGGCTGCAGCGCCAGGGTGA GCACTGAGATACACTCCTTC
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MAVELLDNEQTELLLNQLNEALGSGMFVHVRQMLLNMAASDIALVLESSPPRTRQVLWQLIDPELAGEVLEELGEEMKDK FIRQMSPERLARAAAGLDTDDLAYILRSLPDSLYKQVLQSMSIQDRSRAEQALSYPEETAGGIMNTDTVTIRPDVNVDVI LRYLRQLGSLPEATDMLYVVDRHDVLLGAVKLTALLTCSPSTPIRELIDADIEGIPATMSDTEAAALFERHDWVSAPVID AEGKLLGRITIDDVVDVIREDAEHSMMGMAGMDDDEDTFGPVLKSSFRRSLWLTVNLFAALLAASVSNLFESTLEQFATI AILMTIVPSMGGVAGNQTLALVIRGMALGHIGQSNSRWLIGKELAIGFLNGLLWSVLVFVAIWLWKGDLALGALIGGAML INMTVAGLAGASIPLLLKRLKIDPALAGGMVLTTVTDVIGLFAFLGLATAFLMR
Sequences:
>Translated_454_residues MAVELLDNEQTELLLNQLNEALGSGMFVHVRQMLLNMAASDIALVLESSPPRTRQVLWQLIDPELAGEVLEELGEEMKDK FIRQMSPERLARAAAGLDTDDLAYILRSLPDSLYKQVLQSMSIQDRSRAEQALSYPEETAGGIMNTDTVTIRPDVNVDVI LRYLRQLGSLPEATDMLYVVDRHDVLLGAVKLTALLTCSPSTPIRELIDADIEGIPATMSDTEAAALFERHDWVSAPVID AEGKLLGRITIDDVVDVIREDAEHSMMGMAGMDDDEDTFGPVLKSSFRRSLWLTVNLFAALLAASVSNLFESTLEQFATI AILMTIVPSMGGVAGNQTLALVIRGMALGHIGQSNSRWLIGKELAIGFLNGLLWSVLVFVAIWLWKGDLALGALIGGAML INMTVAGLAGASIPLLLKRLKIDPALAGGMVLTTVTDVIGLFAFLGLATAFLMR >Mature_453_residues AVELLDNEQTELLLNQLNEALGSGMFVHVRQMLLNMAASDIALVLESSPPRTRQVLWQLIDPELAGEVLEELGEEMKDKF IRQMSPERLARAAAGLDTDDLAYILRSLPDSLYKQVLQSMSIQDRSRAEQALSYPEETAGGIMNTDTVTIRPDVNVDVIL RYLRQLGSLPEATDMLYVVDRHDVLLGAVKLTALLTCSPSTPIRELIDADIEGIPATMSDTEAAALFERHDWVSAPVIDA EGKLLGRITIDDVVDVIREDAEHSMMGMAGMDDDEDTFGPVLKSSFRRSLWLTVNLFAALLAASVSNLFESTLEQFATIA ILMTIVPSMGGVAGNQTLALVIRGMALGHIGQSNSRWLIGKELAIGFLNGLLWSVLVFVAIWLWKGDLALGALIGGAMLI NMTVAGLAGASIPLLLKRLKIDPALAGGMVLTTVTDVIGLFAFLGLATAFLMR
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 49258; Mature: 49127
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS00189 LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVELLDNEQTELLLNQLNEALGSGMFVHVRQMLLNMAASDIALVLESSPPRTRQVLWQL CEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHH IDPELAGEVLEELGEEMKDKFIRQMSPERLARAAAGLDTDDLAYILRSLPDSLYKQVLQS HCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH MSIQDRSRAEQALSYPEETAGGIMNTDTVTIRPDVNVDVILRYLRQLGSLPEATDMLYVV CCCCHHHHHHHHHCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEE DRHDVLLGAVKLTALLTCSPSTPIRELIDADIEGIPATMSDTEAAALFERHDWVSAPVID ECCHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEC AEGKLLGRITIDDVVDVIREDAEHSMMGMAGMDDDEDTFGPVLKSSFRRSLWLTVNLFAA CCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLAASVSNLFESTLEQFATIAILMTIVPSMGGVAGNQTLALVIRGMALGHIGQSNSRWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE GKELAIGFLNGLLWSVLVFVAIWLWKGDLALGALIGGAMLINMTVAGLAGASIPLLLKRL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KIDPALAGGMVLTTVTDVIGLFAFLGLATAFLMR HCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVELLDNEQTELLLNQLNEALGSGMFVHVRQMLLNMAASDIALVLESSPPRTRQVLWQL EEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHH IDPELAGEVLEELGEEMKDKFIRQMSPERLARAAAGLDTDDLAYILRSLPDSLYKQVLQS HCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH MSIQDRSRAEQALSYPEETAGGIMNTDTVTIRPDVNVDVILRYLRQLGSLPEATDMLYVV CCCCHHHHHHHHHCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEE DRHDVLLGAVKLTALLTCSPSTPIRELIDADIEGIPATMSDTEAAALFERHDWVSAPVID ECCHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEC AEGKLLGRITIDDVVDVIREDAEHSMMGMAGMDDDEDTFGPVLKSSFRRSLWLTVNLFAA CCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLAASVSNLFESTLEQFATIAILMTIVPSMGGVAGNQTLALVIRGMALGHIGQSNSRWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE GKELAIGFLNGLLWSVLVFVAIWLWKGDLALGALIGGAMLINMTVAGLAGASIPLLLKRL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KIDPALAGGMVLTTVTDVIGLFAFLGLATAFLMR HCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]