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The map label for this gene is yjeF [H]

Identifier: 119776162

GI number: 119776162

Start: 3604771

End: 3606261

Strand: Reverse

Name: yjeF [H]

Synonym: Sama_3030

Alternate gene names: 119776162

Gene position: 3606261-3604771 (Counterclockwise)

Preceding gene: 119776163

Following gene: 119776161

Centisome position: 83.75

GC content: 57.61

Gene sequence:

>1491_bases
ATGAGTGATTCTTGCCTGTCCTTGCCTCAAACACTGTATTCGGCCGCCCAGGTGAAGGCTGCTGAAGTCAATGCAGTCAA
TTCAGGGGCTTGTAGCCTGTACGAGCTGGTCGAGCAGGCTGGCAGTGCTGCTATGGCGATTTTAGAGTCGTCCGAGCACT
GTAATCTCCCCACAGTGATTTTGGTGGGCAAGGGGAATAATGGCGCTGATGCGCTGGTGGTCGCCAGGTTGCTGCTGACC
AAGGGCAATCGTGCCCGGGTGCTGCTGCTTGGGCAAGGCAAAACCCAGGAATATGTCACAGCCATGGCCGCCTTTGTCGA
GGCTGGTGGTGTCTCAGAAGCATTTACCGAATCTGCCCTGGAAGGTGCTGACGTCATCATTGATGGGGTACTGGGTACCG
GAAGCTGCGGCGAACTGAGCGATGACTTGCAGCAGTGTTTCAACGCGGTAAACGCGACGCCAGCCTGGGTGCTCAGCCTG
GATATGCCTTCCGGTGTGAATGCGGATACCGGCAACGTGAATCCGGTTGCGATTCAAGCCGATGTCACCCTGTGTTTTGG
CGGGCTAAAGCAAGGGTTGTTTACTTCCAGAGCACGGCATTTTGCTGGGCTTATTCGCTACGCATCCCTCGGACTTACTG
ATTTTCTCGCCCAGCTCCCGGCAGAGGCCCTGCGGGTTGATGCAGGGTATCTGAAGGATCTGCTCGGACGTCGTCCACGC
GACAGCCACAAGGGGAAATCCGGCAAGGTTACCATCATGGGGGGCAACTATGGCATGGCCGGTGCTGTGCGGTTGGCTGG
GGAGGCCTGTCTTCGCGCCGGTGCGGGGTTGGTAACGGTTATCAGCCGACCGGAACATCAGCTGACCGTGAATGCCAACC
GGCCAGAGCTGATGTTTTGGGGGTGCGAATTGGTGGACATGGAGGTGTATCTGCGTTTGGGTTGGGCTGATGTGCTGGTG
CTTGGCCCCGGCCTTGGCAAGGATGACTGGGGATATAACCTGTACAAGGCGGTTGGTTTATCGGATAAACCCTGTGTGCT
CGATGCCGATGCGCTGAACCTGTTATCAAAAGAGCCCTGTCGTCAGGTCAATCGCGTTTTGACGCCCCACCCCGGCGAAG
CGGCAAGGCTGCTGGGGGTGTCCACTGCCCAGATAGAGGTCGACAGGTTTGCTGCTGTCAGGCAGTTACAGGAGAGATTC
GGGGGCGTTGTCTTGCTCAAAGGTGCAGGTACGCTTATCTATGACGGCGATAGTCTGGTGGTGGCTCCCGTTGGCAACCC
GGGCCTGGCCAGTGGTGGGTGCGGAGATGTTTTATCTGGTATAATCGCCGCCCTTATGGCTCAGGGGCTCGATACCATGA
CGGCGACTATCGCTGGTGTGGTGGTCCACGGTGAGGCGGCAGACCTCGCAGCACTCGCCGGGGAGCGGGGCATGCTCGCC
AGTGACCTGATGCCTTTTATTCGCCAATTGGTCAATAGTGATTTAATCTAG

Upstream 100 bases:

>100_bases
CCCGCAAGGGTGTTCACTGTGTAAGTGTATAAAGTCATCCGCAGCGCCGCCAGTAGACACCGTTATTTGATTGCATCCGA
TGTGAAATGGAGTTGAAGGT

Downstream 100 bases:

>100_bases
GCAACATTGATATAGCCAGTGCCAGCAAAGGGTGTTGGCGCTGTTGCTGACTATTCAAGAGCCGAGATGACAGACGTTAA
GATTTTTCTCGAGACCGACG

Product: YjeF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MSDSCLSLPQTLYSAAQVKAAEVNAVNSGACSLYELVEQAGSAAMAILESSEHCNLPTVILVGKGNNGADALVVARLLLT
KGNRARVLLLGQGKTQEYVTAMAAFVEAGGVSEAFTESALEGADVIIDGVLGTGSCGELSDDLQQCFNAVNATPAWVLSL
DMPSGVNADTGNVNPVAIQADVTLCFGGLKQGLFTSRARHFAGLIRYASLGLTDFLAQLPAEALRVDAGYLKDLLGRRPR
DSHKGKSGKVTIMGGNYGMAGAVRLAGEACLRAGAGLVTVISRPEHQLTVNANRPELMFWGCELVDMEVYLRLGWADVLV
LGPGLGKDDWGYNLYKAVGLSDKPCVLDADALNLLSKEPCRQVNRVLTPHPGEAARLLGVSTAQIEVDRFAAVRQLQERF
GGVVLLKGAGTLIYDGDSLVVAPVGNPGLASGGCGDVLSGIIAALMAQGLDTMTATIAGVVVHGEAADLAALAGERGMLA
SDLMPFIRQLVNSDLI

Sequences:

>Translated_496_residues
MSDSCLSLPQTLYSAAQVKAAEVNAVNSGACSLYELVEQAGSAAMAILESSEHCNLPTVILVGKGNNGADALVVARLLLT
KGNRARVLLLGQGKTQEYVTAMAAFVEAGGVSEAFTESALEGADVIIDGVLGTGSCGELSDDLQQCFNAVNATPAWVLSL
DMPSGVNADTGNVNPVAIQADVTLCFGGLKQGLFTSRARHFAGLIRYASLGLTDFLAQLPAEALRVDAGYLKDLLGRRPR
DSHKGKSGKVTIMGGNYGMAGAVRLAGEACLRAGAGLVTVISRPEHQLTVNANRPELMFWGCELVDMEVYLRLGWADVLV
LGPGLGKDDWGYNLYKAVGLSDKPCVLDADALNLLSKEPCRQVNRVLTPHPGEAARLLGVSTAQIEVDRFAAVRQLQERF
GGVVLLKGAGTLIYDGDSLVVAPVGNPGLASGGCGDVLSGIIAALMAQGLDTMTATIAGVVVHGEAADLAALAGERGMLA
SDLMPFIRQLVNSDLI
>Mature_495_residues
SDSCLSLPQTLYSAAQVKAAEVNAVNSGACSLYELVEQAGSAAMAILESSEHCNLPTVILVGKGNNGADALVVARLLLTK
GNRARVLLLGQGKTQEYVTAMAAFVEAGGVSEAFTESALEGADVIIDGVLGTGSCGELSDDLQQCFNAVNATPAWVLSLD
MPSGVNADTGNVNPVAIQADVTLCFGGLKQGLFTSRARHFAGLIRYASLGLTDFLAQLPAEALRVDAGYLKDLLGRRPRD
SHKGKSGKVTIMGGNYGMAGAVRLAGEACLRAGAGLVTVISRPEHQLTVNANRPELMFWGCELVDMEVYLRLGWADVLVL
GPGLGKDDWGYNLYKAVGLSDKPCVLDADALNLLSKEPCRQVNRVLTPHPGEAARLLGVSTAQIEVDRFAAVRQLQERFG
GVVLLKGAGTLIYDGDSLVVAPVGNPGLASGGCGDVLSGIIAALMAQGLDTMTATIAGVVVHGEAADLAALAGERGMLAS
DLMPFIRQLVNSDLI

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=501, Percent_Identity=43.313373253493, Blast_Score=355, Evalue=3e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 51593; Mature: 51462

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSCLSLPQTLYSAAQVKAAEVNAVNSGACSLYELVEQAGSAAMAILESSEHCNLPTVI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEE
LVGKGNNGADALVVARLLLTKGNRARVLLLGQGKTQEYVTAMAAFVEAGGVSEAFTESAL
EEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHH
EGADVIIDGVLGTGSCGELSDDLQQCFNAVNATPAWVLSLDMPSGVNADTGNVNPVAIQA
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEE
DVTLCFGGLKQGLFTSRARHFAGLIRYASLGLTDFLAQLPAEALRVDAGYLKDLLGRRPR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHCCHHHHHHHHCCCCC
DSHKGKSGKVTIMGGNYGMAGAVRLAGEACLRAGAGLVTVISRPEHQLTVNANRPELMFW
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEEEEE
GCELVDMEVYLRLGWADVLVLGPGLGKDDWGYNLYKAVGLSDKPCVLDADALNLLSKEPC
CCEEEEEEEEEEECCEEEEEECCCCCCCCCCCCHHEECCCCCCCCEEEHHHHHHHHHHHH
RQVNRVLTPHPGEAARLLGVSTAQIEVDRFAAVRQLQERFGGVVLLKGAGTLIYDGDSLV
HHHHHCCCCCCCCHHHHEECCHHEEEHHHHHHHHHHHHHHCCEEEEECCCEEEECCCEEE
VAPVGNPGLASGGCGDVLSGIIAALMAQGLDTMTATIAGVVVHGEAADLAALAGERGMLA
EEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCHHHHHHHCCCCCCHH
SDLMPFIRQLVNSDLI
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDSCLSLPQTLYSAAQVKAAEVNAVNSGACSLYELVEQAGSAAMAILESSEHCNLPTVI
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEE
LVGKGNNGADALVVARLLLTKGNRARVLLLGQGKTQEYVTAMAAFVEAGGVSEAFTESAL
EEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHH
EGADVIIDGVLGTGSCGELSDDLQQCFNAVNATPAWVLSLDMPSGVNADTGNVNPVAIQA
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEE
DVTLCFGGLKQGLFTSRARHFAGLIRYASLGLTDFLAQLPAEALRVDAGYLKDLLGRRPR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHCCHHHHHHHHCCCCC
DSHKGKSGKVTIMGGNYGMAGAVRLAGEACLRAGAGLVTVISRPEHQLTVNANRPELMFW
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEEEEE
GCELVDMEVYLRLGWADVLVLGPGLGKDDWGYNLYKAVGLSDKPCVLDADALNLLSKEPC
CCEEEEEEEEEEECCEEEEEECCCCCCCCCCCCHHEECCCCCCCCEEEHHHHHHHHHHHH
RQVNRVLTPHPGEAARLLGVSTAQIEVDRFAAVRQLQERFGGVVLLKGAGTLIYDGDSLV
HHHHHCCCCCCCCHHHHEECCHHEEEHHHHHHHHHHHHHHCCEEEEECCCEEEECCCEEE
VAPVGNPGLASGGCGDVLSGIIAALMAQGLDTMTATIAGVVVHGEAADLAALAGERGMLA
EEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCHHHHHHHCCCCCCHH
SDLMPFIRQLVNSDLI
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]