Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776163

Identifier: 119776163

GI number: 119776163

Start: 3606713

End: 3607168

Strand: Reverse

Name: 119776163

Synonym: Sama_3031

Alternate gene names: NA

Gene position: 3607168-3606713 (Counterclockwise)

Preceding gene: 119776164

Following gene: 119776162

Centisome position: 83.77

GC content: 44.52

Gene sequence:

>456_bases
ATGCGTATTCAACAATTGCGTGAGCTTCTGGAGTACCTGGCAACATGCCGGCTGGAAATGGCTCAACTTTACAAAAGGCT
GCATGCCCAAGCTGACTCTTCCAGGGTGAAATTGATGCTTGAGTACTTTCAGCAGCAACAAAAGCATATTGCAAAAAAAC
TGGAAGACTATGTGGACGATGCGCCATCAAGACTTCTGGATACTTGGTATAAAGACCTTATTTTTGAAGACTTTATTAAA
CGTTGTCAAAGCACTATGTTGCCAGCCAATATGCAGGAAGACGATGTGCTGAGTCTGCACCTGGATTTGGAAAACCGTTT
GATTGCATTGCTGGAAAAAACCGCTGAAACATCGCAAACCGAAGAAATTCGCAGTGCCTTGGCCGATTTGGTCAGGGTAG
AAAAGATTCAGCAGCAAAGACTCGTCCACAGTACCATCCGGATGGATGATATCTAG

Upstream 100 bases:

>100_bases
ATGATGCAATTCAAATAATCCACCGATAAATGCTTCCATAATGGCACCAGACAGAATTGAAATTGGCCTTAACAGGGTCA
TTGATGATGGAGGCAGTCCT

Downstream 100 bases:

>100_bases
TGATGATTCCATCTTAAAAGACCGGCCTCATAGGCCGGTTTTTTTATGGATAACGCCAGAAGGGTCAATCACTTTGCATG
ATTTACGTCAAAGTTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRIQQLRELLEYLATCRLEMAQLYKRLHAQADSSRVKLMLEYFQQQQKHIAKKLEDYVDDAPSRLLDTWYKDLIFEDFIK
RCQSTMLPANMQEDDVLSLHLDLENRLIALLEKTAETSQTEEIRSALADLVRVEKIQQQRLVHSTIRMDDI

Sequences:

>Translated_151_residues
MRIQQLRELLEYLATCRLEMAQLYKRLHAQADSSRVKLMLEYFQQQQKHIAKKLEDYVDDAPSRLLDTWYKDLIFEDFIK
RCQSTMLPANMQEDDVLSLHLDLENRLIALLEKTAETSQTEEIRSALADLVRVEKIQQQRLVHSTIRMDDI
>Mature_151_residues
MRIQQLRELLEYLATCRLEMAQLYKRLHAQADSSRVKLMLEYFQQQQKHIAKKLEDYVDDAPSRLLDTWYKDLIFEDFIK
RCQSTMLPANMQEDDVLSLHLDLENRLIALLEKTAETSQTEEIRSALADLVRVEKIQQQRLVHSTIRMDDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17938; Mature: 17938

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIQQLRELLEYLATCRLEMAQLYKRLHAQADSSRVKLMLEYFQQQQKHIAKKLEDYVDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APSRLLDTWYKDLIFEDFIKRCQSTMLPANMQEDDVLSLHLDLENRLIALLEKTAETSQT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EEIRSALADLVRVEKIQQQRLVHSTIRMDDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIQQLRELLEYLATCRLEMAQLYKRLHAQADSSRVKLMLEYFQQQQKHIAKKLEDYVDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APSRLLDTWYKDLIFEDFIKRCQSTMLPANMQEDDVLSLHLDLENRLIALLEKTAETSQT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EEIRSALADLVRVEKIQQQRLVHSTIRMDDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA