Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776133

Identifier: 119776133

GI number: 119776133

Start: 3574539

End: 3574790

Strand: Direct

Name: 119776133

Synonym: Sama_3001

Alternate gene names: NA

Gene position: 3574539-3574790 (Clockwise)

Preceding gene: 119776132

Following gene: 119776134

Centisome position: 83.01

GC content: 51.98

Gene sequence:

>252_bases
ATGCTCATTCCCTACGACGCCTTAAGCCAATTGCCATCCGATACCCTGAATAACCTTATCCGTGAATACCTGCTGACTCA
GGTGGAAGATGGCGGATTTGACAGTTTGGCAGAAGGTCATCTCGACGAGGCGATTGCCCGCTGCAAAGTGCTGCTAAAGC
GCGGTGAGTTGGTGGTGGAGTATTCCGAAGACAACGACAGCGTTGGGATTCGTCATAAAAGCAGCCTGCCGTCACAGCAA
TCCCAAGACTGA

Upstream 100 bases:

>100_bases
CTTTATCAATGGTGGCAGCCCGTGGCGGCCACAGTTTTACCTCGAGCGGCGTATCCTGGATTTTTTGCAGGCCGTGCCTG
CTGCAAAATAAGGACCGCAG

Downstream 100 bases:

>100_bases
CAGCCGACTATTGACCCGAAGCAGTCCGAGCCCGTATAACTAACGGGCCCGCATTTTTATCAAAATTTTTTAACATTTCA
GGAAGTGCCATGTCTGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MLIPYDALSQLPSDTLNNLIREYLLTQVEDGGFDSLAEGHLDEAIARCKVLLKRGELVVEYSEDNDSVGIRHKSSLPSQQ
SQD

Sequences:

>Translated_83_residues
MLIPYDALSQLPSDTLNNLIREYLLTQVEDGGFDSLAEGHLDEAIARCKVLLKRGELVVEYSEDNDSVGIRHKSSLPSQQ
SQD
>Mature_83_residues
MLIPYDALSQLPSDTLNNLIREYLLTQVEDGGFDSLAEGHLDEAIARCKVLLKRGELVVEYSEDNDSVGIRHKSSLPSQQ
SQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9246; Mature: 9246

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIPYDALSQLPSDTLNNLIREYLLTQVEDGGFDSLAEGHLDEAIARCKVLLKRGELVVE
CCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
YSEDNDSVGIRHKSSLPSQQSQD
ECCCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure
MLIPYDALSQLPSDTLNNLIREYLLTQVEDGGFDSLAEGHLDEAIARCKVLLKRGELVVE
CCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
YSEDNDSVGIRHKSSLPSQQSQD
ECCCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA