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The map label for this gene is yggA [C]

Identifier: 119776120

GI number: 119776120

Start: 3559083

End: 3559709

Strand: Direct

Name: yggA [C]

Synonym: Sama_2988

Alternate gene names: 119776120

Gene position: 3559083-3559709 (Clockwise)

Preceding gene: 119776118

Following gene: 119776121

Centisome position: 82.65

GC content: 59.33

Gene sequence:

>627_bases
GTGGAAACCGCATTCGTTCAGGGGCTGGCCATAGGCGCCAGCCTGATCATCGCCGTCGGCGCCCAAAACGCCTTTGTCCT
CAAGCAGGGGATCATGCGCGCCCACAGCCTGCCCATTGCTTTGACCTGCTCGCTGATTGATGCGCTGATGATTGCTGCCG
GTGTGGCCGGGCTGGGCTCACTTATCCTGGCGTTTCCCGCCCTGAAACATGGGGCAACCTTCGGCGGCGCTGCCTTCCTG
CTGTGGTATGGCACCAATGCCCTGAAGGCCTCCTTCAGCGATAAGGAAATGGACTTGTCCAAGGCGACAGGCGCAGGCAG
TCTCAAGGCGGCGTTGATGACCACTCTGGCCATCAGTTTTTTGAACCCGCACCTGTATCTGGATACCGTGGTGCTGCTGG
GCTCCATCAGCACCCAGTTCAGCGGTGAAGCCCGGCAATGGTTTGGCGCAGGCGCCATTCTGGCATCCTTTCTGTGGTTC
TTTACCTTAAGCTTTGGCGCCAGACTCATGGCCCCTATGTTTGCCAGGCCCGCAGCCTGGCGCTATCTGGATCGCTTTAT
TTTTGTGACCATGTACGCCATTGCCATCGCGCTGCTATGGCCCTACGCCAAGGCGCTGCTGGTCTGA

Upstream 100 bases:

>100_bases
ATCATAAGAGTTACTAATATCACATAAAAAACATTAGTTATCTTAATTATTTTGTCTTGGTTAAGCTTCGCACAATTGCT
ACCGATTTGAGGAAAACCCA

Downstream 100 bases:

>100_bases
ATCCCATCATATTTTGTGACCATGTACGCCATTGCCATCGCGCTGCTATGGCCCTACGCCAGGGCGCTGCTGGTCTGAAT
CCCGTCATCCGCTGCCGCAT

Product: L-lysine exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
METAFVQGLAIGASLIIAVGAQNAFVLKQGIMRAHSLPIALTCSLIDALMIAAGVAGLGSLILAFPALKHGATFGGAAFL
LWYGTNALKASFSDKEMDLSKATGAGSLKAALMTTLAISFLNPHLYLDTVVLLGSISTQFSGEARQWFGAGAILASFLWF
FTLSFGARLMAPMFARPAAWRYLDRFIFVTMYAIAIALLWPYAKALLV

Sequences:

>Translated_208_residues
METAFVQGLAIGASLIIAVGAQNAFVLKQGIMRAHSLPIALTCSLIDALMIAAGVAGLGSLILAFPALKHGATFGGAAFL
LWYGTNALKASFSDKEMDLSKATGAGSLKAALMTTLAISFLNPHLYLDTVVLLGSISTQFSGEARQWFGAGAILASFLWF
FTLSFGARLMAPMFARPAAWRYLDRFIFVTMYAIAIALLWPYAKALLV
>Mature_208_residues
METAFVQGLAIGASLIIAVGAQNAFVLKQGIMRAHSLPIALTCSLIDALMIAAGVAGLGSLILAFPALKHGATFGGAAFL
LWYGTNALKASFSDKEMDLSKATGAGSLKAALMTTLAISFLNPHLYLDTVVLLGSISTQFSGEARQWFGAGAILASFLWF
FTLSFGARLMAPMFARPAAWRYLDRFIFVTMYAIAIALLWPYAKALLV

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=199, Percent_Identity=42.2110552763819, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22104; Mature: 22104

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METAFVQGLAIGASLIIAVGAQNAFVLKQGIMRAHSLPIALTCSLIDALMIAAGVAGLGS
CCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LILAFPALKHGATFGGAAFLLWYGTNALKASFSDKEMDLSKATGAGSLKAALMTTLAISF
HHHHHHHHHHCCCCCHHEEEEEECCHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH
LNPHLYLDTVVLLGSISTQFSGEARQWFGAGAILASFLWFFTLSFGARLMAPMFARPAAW
HCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RYLDRFIFVTMYAIAIALLWPYAKALLV
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METAFVQGLAIGASLIIAVGAQNAFVLKQGIMRAHSLPIALTCSLIDALMIAAGVAGLGS
CCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LILAFPALKHGATFGGAAFLLWYGTNALKASFSDKEMDLSKATGAGSLKAALMTTLAISF
HHHHHHHHHHCCCCCHHEEEEEECCHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH
LNPHLYLDTVVLLGSISTQFSGEARQWFGAGAILASFLWFFTLSFGARLMAPMFARPAAW
HCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RYLDRFIFVTMYAIAIALLWPYAKALLV
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]