Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775999

Identifier: 119775999

GI number: 119775999

Start: 3405679

End: 3406347

Strand: Direct

Name: 119775999

Synonym: Sama_2867

Alternate gene names: NA

Gene position: 3405679-3406347 (Clockwise)

Preceding gene: 119775988

Following gene: 119776002

Centisome position: 79.09

GC content: 58.15

Gene sequence:

>669_bases
ATGCATGCCATCTTCGTCCATGGATTGGGTCGAACCCCGGTATCCGGGTTTCCGATGCTCGCCACCTTAAGACGGGCAGG
TATTCGCTGCCAGACCCTCGGCTATCTGGCCGCCGTTGAGCCCGTGGATGCGATTGTCAGGCGCCTTGGTAAACACTTAG
CCCGGCTGCCTGCCGATGAGCCCTATGTTCTCATAGGTCATTCTCTGGGTGGGGTTATCATCCGCACTCTGCTGAGTACT
TCACCGCCACCATCCCAGTTGCCCGCTCATGTCTTTTTGCTCGGCTCACCGGTGCAACCGGCAAGGCTTGCCATAAAGCT
TAAAACCAATCCGCTGTTTCGATTATTCAGTGGCGATGCCGGACAACTACTTGGCAGCGCGCCGCGCATGGCCGCCATAG
ACGAGCCCACCTCACTCGGCATTCCCTGCACTGTTATCAAAGGCACAGGGGGGATGCCCACCGGCACCAAGGGCCGTAAA
CTGCCGCCCTTTTACGGCGAAGAAAACGACGGCGTGGTTGCGGTATCGGAAGTGACAGCACCCTGGCAGTACAATAATCC
CCTGTGTGAGCGGGTTTCACTGCCATTGCCCCACACTCTGCTGCCATCAAGCCCTGCCGTGGGAAGGGTGATCGTAGCGC
TGCTGCGAAGCAAAGGCCTGATAACTTGA

Upstream 100 bases:

>100_bases
ATGTAAGCTCCCGCTTAAAATATGAAGAAGGTTTAATTTGTCATCGATGATTTAGCCAGCTAAAAACAAAGGCTTCAAGG
GAATATTCAGGAGTCGGGCC

Downstream 100 bases:

>100_bases
GGCTAATCAATCAACTATTGAAAAATCCACTCAAGATTGAACAAATGCTTCGCACTGCTTTCGAAAATCTGCTTTGTTTT
TTGCGTCCTTAATTTCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MHAIFVHGLGRTPVSGFPMLATLRRAGIRCQTLGYLAAVEPVDAIVRRLGKHLARLPADEPYVLIGHSLGGVIIRTLLST
SPPPSQLPAHVFLLGSPVQPARLAIKLKTNPLFRLFSGDAGQLLGSAPRMAAIDEPTSLGIPCTVIKGTGGMPTGTKGRK
LPPFYGEENDGVVAVSEVTAPWQYNNPLCERVSLPLPHTLLPSSPAVGRVIVALLRSKGLIT

Sequences:

>Translated_222_residues
MHAIFVHGLGRTPVSGFPMLATLRRAGIRCQTLGYLAAVEPVDAIVRRLGKHLARLPADEPYVLIGHSLGGVIIRTLLST
SPPPSQLPAHVFLLGSPVQPARLAIKLKTNPLFRLFSGDAGQLLGSAPRMAAIDEPTSLGIPCTVIKGTGGMPTGTKGRK
LPPFYGEENDGVVAVSEVTAPWQYNNPLCERVSLPLPHTLLPSSPAVGRVIVALLRSKGLIT
>Mature_222_residues
MHAIFVHGLGRTPVSGFPMLATLRRAGIRCQTLGYLAAVEPVDAIVRRLGKHLARLPADEPYVLIGHSLGGVIIRTLLST
SPPPSQLPAHVFLLGSPVQPARLAIKLKTNPLFRLFSGDAGQLLGSAPRMAAIDEPTSLGIPCTVIKGTGGMPTGTKGRK
LPPFYGEENDGVVAVSEVTAPWQYNNPLCERVSLPLPHTLLPSSPAVGRVIVALLRSKGLIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23492; Mature: 23492

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAIFVHGLGRTPVSGFPMLATLRRAGIRCQTLGYLAAVEPVDAIVRRLGKHLARLPADE
CCEEEEECCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
PYVLIGHSLGGVIIRTLLSTSPPPSQLPAHVFLLGSPVQPARLAIKLKTNPLFRLFSGDA
CEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEECCCH
GQLLGSAPRMAAIDEPTSLGIPCTVIKGTGGMPTGTKGRKLPPFYGEENDGVVAVSEVTA
HHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
PWQYNNPLCERVSLPLPHTLLPSSPAVGRVIVALLRSKGLIT
CCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHAIFVHGLGRTPVSGFPMLATLRRAGIRCQTLGYLAAVEPVDAIVRRLGKHLARLPADE
CCEEEEECCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
PYVLIGHSLGGVIIRTLLSTSPPPSQLPAHVFLLGSPVQPARLAIKLKTNPLFRLFSGDA
CEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEECCCH
GQLLGSAPRMAAIDEPTSLGIPCTVIKGTGGMPTGTKGRKLPPFYGEENDGVVAVSEVTA
HHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
PWQYNNPLCERVSLPLPHTLLPSSPAVGRVIVALLRSKGLIT
CCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA