The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775562

Identifier: 119775562

GI number: 119775562

Start: 2922458

End: 2923141

Strand: Reverse

Name: 119775562

Synonym: Sama_2428

Alternate gene names: NA

Gene position: 2923141-2922458 (Counterclockwise)

Preceding gene: 119775563

Following gene: 119775561

Centisome position: 67.88

GC content: 54.68

Gene sequence:

>684_bases
GTGAACTCTTGCCCGCCTGAAGTGAACAACAACCCACAAACCCCTCTGCCATCCTGGCTTAAACTCGATGGCGTGCCGGG
GGATGTGATGGTGCTCTTTGCCCACGGCGCGGGTGCCGATATGGATTCTGACTTTATGGCGGCCATGGCGTCAAGGCTTG
CCAGCCAGGGTGTGGCTGTGGTGCGTTTTAACTTTCCTTATATGGAACAGCGCAAGTTGGATGGTAAGCGCCGTCCTCCC
AATCGAGCCCCTGCGCTGCTCGAGTGCTTTCGCGAAGCCATTGCCATAGTTGATGCAAACTATAGACCCAAGCAACTGTT
TCTCATGGGTAAGTCCATGGGAGGGCGTATGGCTGCCATTCTGGGCGCCGAGTTTGATGTGGCACAAATTGCAGGGATCC
TTTGTTTGGGTTACCCCTTTTTACCGCCCAAGGGGAAAGAAGTTCGCCTTGAGCCTTTGGCTAATTGCCAACTGCCACTG
TTGATAGTGCAGGGTGAGCGCGACAGCTTTGGCACCAGGGCGCAGGTTGCTGCCTGGAATGTGCCTTCAGCCGTGAAATT
CTGCTGGATTGCCGATGGTGATCACAGCCTGACTCCGCGCAAGTCGTCAGGACTTACCGAAGCGGATAACCTGATAGCTG
CTGCCTCGGCCTGCCTTGAATTTATGGGAGAAATGAATGAATAG

Upstream 100 bases:

>100_bases
GATGCCTATTATCTGGTGTGCCAGCAAAACCATGCCGAGCTTGGCAAAATTGTGGCGTTCCGCGAATGGATGCTGGACAT
GTTTGCCGAGGAGTCACGCA

Downstream 100 bases:

>100_bases
AGGTTTGTTTTTATTCGCATCTGTGACCGGGTTTCTCGCCGTTGCCCTCGGTGCTTTTGGTGCCCATGGCCTTAAAAATC
TGGTGAGTGCCGAGATGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MNSCPPEVNNNPQTPLPSWLKLDGVPGDVMVLFAHGAGADMDSDFMAAMASRLASQGVAVVRFNFPYMEQRKLDGKRRPP
NRAPALLECFREAIAIVDANYRPKQLFLMGKSMGGRMAAILGAEFDVAQIAGILCLGYPFLPPKGKEVRLEPLANCQLPL
LIVQGERDSFGTRAQVAAWNVPSAVKFCWIADGDHSLTPRKSSGLTEADNLIAAASACLEFMGEMNE

Sequences:

>Translated_227_residues
MNSCPPEVNNNPQTPLPSWLKLDGVPGDVMVLFAHGAGADMDSDFMAAMASRLASQGVAVVRFNFPYMEQRKLDGKRRPP
NRAPALLECFREAIAIVDANYRPKQLFLMGKSMGGRMAAILGAEFDVAQIAGILCLGYPFLPPKGKEVRLEPLANCQLPL
LIVQGERDSFGTRAQVAAWNVPSAVKFCWIADGDHSLTPRKSSGLTEADNLIAAASACLEFMGEMNE
>Mature_227_residues
MNSCPPEVNNNPQTPLPSWLKLDGVPGDVMVLFAHGAGADMDSDFMAAMASRLASQGVAVVRFNFPYMEQRKLDGKRRPP
NRAPALLECFREAIAIVDANYRPKQLFLMGKSMGGRMAAILGAEFDVAQIAGILCLGYPFLPPKGKEVRLEPLANCQLPL
LIVQGERDSFGTRAQVAAWNVPSAVKFCWIADGDHSLTPRKSSGLTEADNLIAAASACLEFMGEMNE

Specific function: Unknown

COG id: COG3571

COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24598; Mature: 24598

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSCPPEVNNNPQTPLPSWLKLDGVPGDVMVLFAHGAGADMDSDFMAAMASRLASQGVAV
CCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEE
VRFNFPYMEQRKLDGKRRPPNRAPALLECFREAIAIVDANYRPKQLFLMGKSMGGRMAAI
EEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEE
LGAEFDVAQIAGILCLGYPFLPPKGKEVRLEPLANCQLPLLIVQGERDSFGTRAQVAAWN
CCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECC
VPSAVKFCWIADGDHSLTPRKSSGLTEADNLIAAASACLEFMGEMNE
CCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSCPPEVNNNPQTPLPSWLKLDGVPGDVMVLFAHGAGADMDSDFMAAMASRLASQGVAV
CCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEE
VRFNFPYMEQRKLDGKRRPPNRAPALLECFREAIAIVDANYRPKQLFLMGKSMGGRMAAI
EEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEE
LGAEFDVAQIAGILCLGYPFLPPKGKEVRLEPLANCQLPLLIVQGERDSFGTRAQVAAWN
CCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECC
VPSAVKFCWIADGDHSLTPRKSSGLTEADNLIAAASACLEFMGEMNE
CCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA