BacMap

Definition	Shewanella amazonensis SB2B chromosome, complete genome.
Accession	NC_008700
Length	4,306,142

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The map label for this gene is rhlE [H]

Identifier: 119775538

GI number: 119775538

Start: 2887909

End: 2889132

Strand: Reverse

Name: rhlE [H]

Synonym: Sama_2404

Alternate gene names: 119775538

Gene position: 2889132-2887909 (Counterclockwise)

Preceding gene: 119775539

Following gene: 119775534

Centisome position: 67.09

GC content: 58.17

Gene sequence:

>1224_bases
GTGTCTTTTGCTGCTTTTACTCTGCCGTCTCCCTTGGCTAACAATCTCGCTAAACTGGGCTTTGTCGAGCCCACCGAGGT
ACAGGCCGGTGCCATCCCCATGATGTTGGCCGGGGATGACCTGATGGTGAAAGCGGCTACCGGGACGGGTAAAACCGCCG
CTTTTTTGCTGCCGATACTTGCCCGGCTGCTTGCTGACGAGGTGGCAAGCCGCAACCTGCCTGCGCCCAGAGCCCTGGTA
CTGGTGCCCACCAGGGAGCTGTGCCAACAGGTTTATGATGCCGCCAAAGCGCTGGCGAAAGGCAGCGCCGTGCGTATTGC
CCAGGTTTATGGTGGTGTGCCCCTGGAAAGCCAGCTCAATGCCATCAAGGGCGGCGTGGACTTGATGGTTGCAACGCCGG
GGCGTTTGCTCGACCACCTGAAAAAACGCACCCTCAGAATCGATACCGTCAGTCAGTTGGTGTTTGACGAGGCCGACCGT
ATGCTCGATATGGGCTTTGAGGATGAGATCCGCGCGCTGGTGAAAAAGCTCGCCAAAACCCGGCAAACTGCGCTGTTCTC
AGCCACCTTGGGGGACAATGTCTGGCAGTTGGCCAAGAGCCTGATGGATTCGCCCAAGCTGCTGGAAATCGCCGCGGCGA
AAGATGCCAAGCCACTGATTGAAGAGCAGGTTTATCAGCTCGACAGCGAGCGCAAGTTCGAATTTATCTGCCACTTGCTG
GGTAAAAACAGCTGGTCTCAGGTGCTTATTTTCAGCCGTACCAAAGAAGGGGCCGATAAGCTTACGGCCAAACTGGTAGA
GGCTGGTCACAGCGCCGTTGCCATGCACGCCGACCTGAGCCAGCGTCAGCGGGAGCAAAACCTTGCCGACTTCAAGGCGG
CCGATGCGCGGGTATTGGTGGCAACTGACGTGGCCGCTCGGGGGTTGGATATACAGGCGCTGCCCTGCATCATCAATGTC
GAACTGCCCTTTAAAAAAGAAGATTACGTACATCGCATCGGGCGCACTGGCCGGGCTGGCAGCGCCGGGCTTGCCATCAG
TTTGCTGGATGTTGCCGACGAGCCTTTGCTGGTGGCGCTTGAGCACTACCTCGACCGGCGCTTGCCTCAGCAGTGGTATC
CGGGCTTTGAACCGGATTTGTCCATCCGTCATGAGCGTCCCCACAGCCTCAGTAAAGCGGCACAAAAACAAAAAGCCCGG
AAGCGGGCTTTGGCGAAGCGCTGA

Upstream 100 bases:

>100_bases
ATTATTGGCATCAGAGCTGAAGCAGCTGCTGCAAGGCGGGTGATCCTGCGATTAAGCCTTGCTACTATAGCGCCCTTTAG
TTTGTGCTCCGGAGTTTCCC

Downstream 100 bases:

>100_bases
GTCGCCCATTACAGCGGCGACCTCAGCAGATAATCAGCCAGATCGTCAGATCCGGCCGCGAAGATACTCAGCCACCGGAC
CTGAGCCTGGATAGCACAGC

Product: DEAD-box ATP dependent DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSFAAFTLPSPLANNLAKLGFVEPTEVQAGAIPMMLAGDDLMVKAATGTGKTAAFLLPILARLLADEVASRNLPAPRALV
LVPTRELCQQVYDAAKALAKGSAVRIAQVYGGVPLESQLNAIKGGVDLMVATPGRLLDHLKKRTLRIDTVSQLVFDEADR
MLDMGFEDEIRALVKKLAKTRQTALFSATLGDNVWQLAKSLMDSPKLLEIAAAKDAKPLIEEQVYQLDSERKFEFICHLL
GKNSWSQVLIFSRTKEGADKLTAKLVEAGHSAVAMHADLSQRQREQNLADFKAADARVLVATDVAARGLDIQALPCIINV
ELPFKKEDYVHRIGRTGRAGSAGLAISLLDVADEPLLVALEHYLDRRLPQQWYPGFEPDLSIRHERPHSLSKAAQKQKAR
KRALAKR

Sequences:

>Translated_407_residues
MSFAAFTLPSPLANNLAKLGFVEPTEVQAGAIPMMLAGDDLMVKAATGTGKTAAFLLPILARLLADEVASRNLPAPRALV
LVPTRELCQQVYDAAKALAKGSAVRIAQVYGGVPLESQLNAIKGGVDLMVATPGRLLDHLKKRTLRIDTVSQLVFDEADR
MLDMGFEDEIRALVKKLAKTRQTALFSATLGDNVWQLAKSLMDSPKLLEIAAAKDAKPLIEEQVYQLDSERKFEFICHLL
GKNSWSQVLIFSRTKEGADKLTAKLVEAGHSAVAMHADLSQRQREQNLADFKAADARVLVATDVAARGLDIQALPCIINV
ELPFKKEDYVHRIGRTGRAGSAGLAISLLDVADEPLLVALEHYLDRRLPQQWYPGFEPDLSIRHERPHSLSKAAQKQKAR
KRALAKR
>Mature_406_residues
SFAAFTLPSPLANNLAKLGFVEPTEVQAGAIPMMLAGDDLMVKAATGTGKTAAFLLPILARLLADEVASRNLPAPRALVL
VPTRELCQQVYDAAKALAKGSAVRIAQVYGGVPLESQLNAIKGGVDLMVATPGRLLDHLKKRTLRIDTVSQLVFDEADRM
LDMGFEDEIRALVKKLAKTRQTALFSATLGDNVWQLAKSLMDSPKLLEIAAAKDAKPLIEEQVYQLDSERKFEFICHLLG
KNSWSQVLIFSRTKEGADKLTAKLVEAGHSAVAMHADLSQRQREQNLADFKAADARVLVATDVAARGLDIQALPCIINVE
LPFKKEDYVHRIGRTGRAGSAGLAISLLDVADEPLLVALEHYLDRRLPQQWYPGFEPDLSIRHERPHSLSKAAQKQKARK
RALAKR

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI262118318, Length=396, Percent_Identity=38.1313131313131, Blast_Score=261, Evalue=6e-70,
Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=40.5479452054795, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI216548263, Length=365, Percent_Identity=40.5479452054795, Blast_Score=260, Evalue=1e-69,
Organism=Homo sapiens, GI13518015, Length=365, Percent_Identity=40.5479452054795, Blast_Score=260, Evalue=2e-69,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=39.945652173913, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=39.945652173913, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=39.945652173913, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI169881239, Length=366, Percent_Identity=39.6174863387978, Blast_Score=252, Evalue=5e-67,
Organism=Homo sapiens, GI13514809, Length=366, Percent_Identity=39.6174863387978, Blast_Score=252, Evalue=5e-67,
Organism=Homo sapiens, GI45446747, Length=356, Percent_Identity=39.0449438202247, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI45446743, Length=356, Percent_Identity=39.0449438202247, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=38.2271468144044, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI41327771, Length=391, Percent_Identity=34.2710997442455, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI21071032, Length=403, Percent_Identity=36.4764267990074, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=35.6940509915014, Blast_Score=229, Evalue=5e-60,
Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=37.2159090909091, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=35.8757062146893, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI38201710, Length=354, Percent_Identity=35.8757062146893, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI222352149, Length=368, Percent_Identity=37.2282608695652, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI20149629, Length=386, Percent_Identity=34.1968911917098, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI7661920, Length=372, Percent_Identity=33.3333333333333, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI51094101, Length=368, Percent_Identity=34.5108695652174, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI164419743, Length=368, Percent_Identity=34.5108695652174, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI31542656, Length=375, Percent_Identity=35.7333333333333, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI55749865, Length=412, Percent_Identity=32.7669902912621, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI188035877, Length=356, Percent_Identity=34.5505617977528, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=32.967032967033, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI13129006, Length=357, Percent_Identity=34.1736694677871, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI50659095, Length=360, Percent_Identity=34.1666666666667, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=33.2439678284182, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI164419732, Length=369, Percent_Identity=31.9783197831978, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI41327776, Length=386, Percent_Identity=32.6424870466321, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=32.6086956521739, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI38569503, Length=376, Percent_Identity=33.5106382978723, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI38569505, Length=376, Percent_Identity=33.5106382978723, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI8922886, Length=362, Percent_Identity=33.4254143646409, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI6005743, Length=362, Percent_Identity=32.8729281767956, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI62241022, Length=345, Percent_Identity=33.3333333333333, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI38327634, Length=370, Percent_Identity=33.7837837837838, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=32.4468085106383, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=29.608938547486, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI4758112, Length=360, Percent_Identity=29.7222222222222, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI18375623, Length=360, Percent_Identity=29.7222222222222, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI62241024, Length=322, Percent_Identity=32.9192546583851, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI4826686, Length=346, Percent_Identity=32.6589595375723, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI41327779, Length=364, Percent_Identity=31.5934065934066, Blast_Score=158, Evalue=9e-39,
Organism=Homo sapiens, GI256223453, Length=368, Percent_Identity=28.5326086956522, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI9506931, Length=383, Percent_Identity=30.5483028720627, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI154759257, Length=434, Percent_Identity=29.7235023041475, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI256773275, Length=356, Percent_Identity=30.6179775280899, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI17505907, Length=186, Percent_Identity=38.7096774193548, Blast_Score=128, Evalue=7e-30,
Organism=Homo sapiens, GI20336298, Length=186, Percent_Identity=38.7096774193548, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=30.8441558441558, Blast_Score=125, Evalue=5e-29,
Organism=Escherichia coli, GI1787016, Length=385, Percent_Identity=46.2337662337662, Blast_Score=345, Evalue=3e-96,
Organism=Escherichia coli, GI1787605, Length=342, Percent_Identity=44.7368421052632, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=37.9310344827586, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1790214, Length=374, Percent_Identity=37.7005347593583, Blast_Score=248, Evalue=7e-67,
Organism=Escherichia coli, GI1788930, Length=348, Percent_Identity=39.0804597701149, Blast_Score=221, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI17510307, Length=351, Percent_Identity=40.1709401709402, Blast_Score=235, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17510309, Length=351, Percent_Identity=40.1709401709402, Blast_Score=235, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI71995514, Length=351, Percent_Identity=40.1709401709402, Blast_Score=235, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI32565321, Length=386, Percent_Identity=34.7150259067358, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI86570094, Length=343, Percent_Identity=37.9008746355685, Blast_Score=232, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17507945, Length=365, Percent_Identity=37.5342465753425, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI17510559, Length=400, Percent_Identity=34, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI71995718, Length=398, Percent_Identity=35.427135678392, Blast_Score=224, Evalue=5e-59,
Organism=Caenorhabditis elegans, GI17555296, Length=398, Percent_Identity=33.1658291457286, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI71987143, Length=374, Percent_Identity=32.8877005347594, Blast_Score=221, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=37.125748502994, Blast_Score=221, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI71995724, Length=372, Percent_Identity=32.7956989247312, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI71999646, Length=353, Percent_Identity=34.5609065155807, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=33.8753387533875, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17507879, Length=398, Percent_Identity=34.4221105527638, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17507121, Length=372, Percent_Identity=32.5268817204301, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI17552642, Length=358, Percent_Identity=36.3128491620112, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI71999644, Length=351, Percent_Identity=34.7578347578348, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI17552114, Length=369, Percent_Identity=32.520325203252, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=33.1550802139037, Blast_Score=208, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI17537549, Length=379, Percent_Identity=33.245382585752, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI71990816, Length=400, Percent_Identity=30.5, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=31.3984168865435, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=31.3984168865435, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17509811, Length=368, Percent_Identity=30.9782608695652, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17505370, Length=342, Percent_Identity=33.9181286549708, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI193208216, Length=400, Percent_Identity=32.5, Blast_Score=164, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI71982858, Length=372, Percent_Identity=29.3010752688172, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17507641, Length=416, Percent_Identity=30.0480769230769, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17536099, Length=397, Percent_Identity=29.2191435768262, Blast_Score=157, Evalue=9e-39,
Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=29.2191435768262, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI32564046, Length=401, Percent_Identity=30.4239401496259, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17536103, Length=390, Percent_Identity=29.2307692307692, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17508543, Length=370, Percent_Identity=29.1891891891892, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17553716, Length=366, Percent_Identity=27.8688524590164, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=28.2857142857143, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI17556951, Length=352, Percent_Identity=30.6818181818182, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI25148203, Length=421, Percent_Identity=24.4655581947743, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI25148291, Length=344, Percent_Identity=28.4883720930233, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71997889, Length=369, Percent_Identity=27.9132791327913, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17565430, Length=390, Percent_Identity=24.3589743589744, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI25148205, Length=348, Percent_Identity=22.9885057471264, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71982862, Length=212, Percent_Identity=27.8301886792453, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=37.3737373737374, Blast_Score=88, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6325138, Length=395, Percent_Identity=39.4936708860759, Blast_Score=259, Evalue=5e-70,
Organism=Saccharomyces cerevisiae, GI6324778, Length=375, Percent_Identity=38.9333333333333, Blast_Score=251, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6324217, Length=376, Percent_Identity=36.7021276595745, Blast_Score=244, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6321360, Length=373, Percent_Identity=39.142091152815, Blast_Score=236, Evalue=5e-63,
Organism=Saccharomyces cerevisiae, GI6320224, Length=368, Percent_Identity=34.5108695652174, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6321856, Length=372, Percent_Identity=35.2150537634409, Blast_Score=221, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6323021, Length=355, Percent_Identity=34.9295774647887, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6320449, Length=381, Percent_Identity=35.1706036745407, Blast_Score=217, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6320041, Length=364, Percent_Identity=32.6923076923077, Blast_Score=200, Evalue=4e-52,
Organism=Saccharomyces cerevisiae, GI6323947, Length=352, Percent_Identity=34.6590909090909, Blast_Score=199, Evalue=8e-52,
Organism=Saccharomyces cerevisiae, GI6322912, Length=373, Percent_Identity=32.171581769437, Blast_Score=192, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6322323, Length=373, Percent_Identity=32.171581769437, Blast_Score=192, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6324620, Length=376, Percent_Identity=31.3829787234043, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=31.5642458100559, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6320119, Length=387, Percent_Identity=29.9741602067183, Blast_Score=176, Evalue=6e-45,
Organism=Saccharomyces cerevisiae, GI6319714, Length=363, Percent_Identity=30.5785123966942, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6321963, Length=394, Percent_Identity=31.2182741116751, Blast_Score=166, Evalue=9e-42,
Organism=Saccharomyces cerevisiae, GI6319618, Length=398, Percent_Identity=30.9045226130653, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321111, Length=375, Percent_Identity=26.9333333333333, Blast_Score=156, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6320173, Length=212, Percent_Identity=39.622641509434, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6320400, Length=401, Percent_Identity=28.6783042394015, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=27.1844660194175, Blast_Score=147, Evalue=4e-36,
Organism=Saccharomyces cerevisiae, GI6321267, Length=377, Percent_Identity=30.2387267904509, Blast_Score=146, Evalue=6e-36,
Organism=Saccharomyces cerevisiae, GI6324366, Length=362, Percent_Identity=28.4530386740331, Blast_Score=132, Evalue=7e-32,
Organism=Saccharomyces cerevisiae, GI6322876, Length=236, Percent_Identity=30.0847457627119, Blast_Score=109, Evalue=8e-25,
Organism=Saccharomyces cerevisiae, GI6321374, Length=390, Percent_Identity=22.8205128205128, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=38.2857142857143, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI17985987, Length=400, Percent_Identity=38, Blast_Score=245, Evalue=4e-65,
Organism=Drosophila melanogaster, GI21356161, Length=351, Percent_Identity=37.8917378917379, Blast_Score=245, Evalue=4e-65,
Organism=Drosophila melanogaster, GI17977678, Length=397, Percent_Identity=35.7682619647355, Blast_Score=238, Evalue=5e-63,
Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=37.6770538243626, Blast_Score=234, Evalue=7e-62,
Organism=Drosophila melanogaster, GI24642151, Length=338, Percent_Identity=36.3905325443787, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24644479, Length=353, Percent_Identity=36.2606232294618, Blast_Score=228, Evalue=8e-60,
Organism=Drosophila melanogaster, GI24644487, Length=353, Percent_Identity=36.2606232294618, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI45551833, Length=353, Percent_Identity=36.2606232294618, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644485, Length=353, Percent_Identity=36.2606232294618, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI281361218, Length=353, Percent_Identity=36.2606232294618, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644481, Length=353, Percent_Identity=36.2606232294618, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644483, Length=353, Percent_Identity=36.2606232294618, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24584994, Length=396, Percent_Identity=33.3333333333333, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=35.7746478873239, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI21355075, Length=345, Percent_Identity=38.5507246376812, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=33.8709677419355, Blast_Score=222, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24585582, Length=369, Percent_Identity=34.4173441734417, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI18857967, Length=361, Percent_Identity=33.5180055401662, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI28575014, Length=366, Percent_Identity=33.6065573770492, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24583281, Length=354, Percent_Identity=33.3333333333333, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24583279, Length=354, Percent_Identity=33.3333333333333, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=36.4217252396166, Blast_Score=192, Evalue=2e-49,
Organism=Drosophila melanogaster, GI17136814, Length=381, Percent_Identity=34.9081364829396, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI24582080, Length=363, Percent_Identity=32.2314049586777, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24582078, Length=363, Percent_Identity=32.2314049586777, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI17136248, Length=363, Percent_Identity=32.2314049586777, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24582075, Length=363, Percent_Identity=32.2314049586777, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI28571808, Length=339, Percent_Identity=31.5634218289086, Blast_Score=170, Evalue=1e-42,
Organism=Drosophila melanogaster, GI28571809, Length=339, Percent_Identity=31.5634218289086, Blast_Score=170, Evalue=1e-42,
Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=29.608938547486, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=29.608938547486, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=29.608938547486, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=29.1005291005291, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI17647335, Length=363, Percent_Identity=30.0275482093664, Blast_Score=162, Evalue=3e-40,
Organism=Drosophila melanogaster, GI20130173, Length=458, Percent_Identity=27.7292576419214, Blast_Score=158, Evalue=5e-39,
Organism=Drosophila melanogaster, GI24666101, Length=356, Percent_Identity=32.0224719101124, Blast_Score=158, Evalue=6e-39,
Organism=Drosophila melanogaster, GI24668515, Length=411, Percent_Identity=30.9002433090024, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI19920478, Length=348, Percent_Identity=28.735632183908, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24643725, Length=410, Percent_Identity=27.5609756097561, Blast_Score=141, Evalue=9e-34,
Organism=Drosophila melanogaster, GI21355559, Length=351, Percent_Identity=30.4843304843305, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI17136666, Length=424, Percent_Identity=27.5943396226415, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI28571338, Length=200, Percent_Identity=34.5, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI18859659, Length=200, Percent_Identity=34.5, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24640164, Length=357, Percent_Identity=22.96918767507, Blast_Score=97, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 44562; Mature: 44431

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAAFTLPSPLANNLAKLGFVEPTEVQAGAIPMMLAGDDLMVKAATGTGKTAAFLLPIL
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHH
ARLLADEVASRNLPAPRALVLVPTRELCQQVYDAAKALAKGSAVRIAQVYGGVPLESQLN
HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCHHHHH
AIKGGVDLMVATPGRLLDHLKKRTLRIDTVSQLVFDEADRMLDMGFEDEIRALVKKLAKT
HHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RQTALFSATLGDNVWQLAKSLMDSPKLLEIAAAKDAKPLIEEQVYQLDSERKFEFICHLL
HHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
GKNSWSQVLIFSRTKEGADKLTAKLVEAGHSAVAMHADLSQRQREQNLADFKAADARVLV
CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEE
ATDVAARGLDIQALPCIINVELPFKKEDYVHRIGRTGRAGSAGLAISLLDVADEPLLVAL
EECHHHCCCCEEECCEEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEHHCCCHHHHHH
EHYLDRRLPQQWYPGFEPDLSIRHERPHSLSKAAQKQKARKRALAKR
HHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFAAFTLPSPLANNLAKLGFVEPTEVQAGAIPMMLAGDDLMVKAATGTGKTAAFLLPIL
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHH
ARLLADEVASRNLPAPRALVLVPTRELCQQVYDAAKALAKGSAVRIAQVYGGVPLESQLN
HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCHHHHH
AIKGGVDLMVATPGRLLDHLKKRTLRIDTVSQLVFDEADRMLDMGFEDEIRALVKKLAKT
HHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RQTALFSATLGDNVWQLAKSLMDSPKLLEIAAAKDAKPLIEEQVYQLDSERKFEFICHLL
HHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
GKNSWSQVLIFSRTKEGADKLTAKLVEAGHSAVAMHADLSQRQREQNLADFKAADARVLV
CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEE
ATDVAARGLDIQALPCIINVELPFKKEDYVHRIGRTGRAGSAGLAISLLDVADEPLLVAL
EECHHHCCCCEEECCEEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEHHCCCHHHHHH
EHYLDRRLPQQWYPGFEPDLSIRHERPHSLSKAAQKQKARKRALAKR
HHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]