The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775465

Identifier: 119775465

GI number: 119775465

Start: 2796037

End: 2797044

Strand: Direct

Name: 119775465

Synonym: Sama_2330

Alternate gene names: NA

Gene position: 2796037-2797044 (Clockwise)

Preceding gene: 119775464

Following gene: 119775466

Centisome position: 64.93

GC content: 39.98

Gene sequence:

>1008_bases
ATGATTGAACTGGATGTTAATGCATTAGCCTCAGATATTTACTACCGGCGAAGCTATATTTCCTTGTATGAGAATGACGC
TGAATACTTTGAGTATACTTATCAAGAAGGTCAGTCTCGCATCAGGTTTTGCTCTCTCAAGCGCAGAATCGACAATGTAT
TGGGCGTTCCTATAAGTGACGAGTTATACGACTTGGAAACCCCTTATGGTTATGGAGGCCCCTTAAGTAACTCTGAGGAT
CAAGGCTTTCTCAATCGTGCTTTTGCTGCCTATAAAAGTCACTGTAAACAGCATAATATTGTTTGTGAGTTTATCCGGTT
TCACCCGCTTAACCCGTTAGCCAAACACAGCTTTCTTTTTAATATGTGCCGTATTGAGCGACACGTGGTCGCAGTAGAGC
TTACCGAAAAAGACACTCGTCGAAGCCAGTATTCAAAAACGACAAGAAACATCATAAAAAAAGCGGAGTCGCAGTTAGAT
ATTGAGCATAACGCGCTAGAAATAGATCAATTCTCTCAATTTTACTTCCATACCATGGAAAGAAACAAAGCCGAGAAATT
TTATTTCTTTGACAACAGTTATTTTCATGCGTTGTTAGCAACTGGATGGACAGAATTACTGGCGGTAAAATATCAGGGTA
CTTACGCGTCCTTAGGTTTGTTTATGATAGGTAATGAGTTGGCCCACTATCATTTATCTGCCAACAATCATGAACTAATG
CACAAAAATGGGAACTACCTGTTACTTGATGCAGCATTCGAACTTGCTCGTTCCCATGGATGTCAATACATGCTTTTGGG
TGGTGGAAGAACCGCTCAAAAAGAAGATAGTTTATTTCTCTTTAAGTCTAAATTCTCAAAGAAAACCTTACCTTTCTATA
TTGCTGGTATCGACTTTATGCCCGAAAAGCGTATAGAACTGAACAAACTTTGGTGCGAATTGAGTACCACAGCAGAGATA
CCGGCAAGATTTCAGCTTTATAGAGCTTTGGAGCCCAATCATGGTTAA

Upstream 100 bases:

>100_bases
CCCATGTATCAATACAGTCTTCGGGGTGAATTGACCAACGCCGAGTTCTTTGAAGCCCGCTTGATTAACCTGCCCAGCAC
GCCGGTAGCCGAGGTGGTCA

Downstream 100 bases:

>100_bases
GACTTTTATCATCGCCGAAGCGGGCGTAAATCATAATGGCAATATTGCTCTGGCAAAGCAGCTAATTGACTCTGCAGTGG
AAGCCGGCGTTGATGCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIELDVNALASDIYYRRSYISLYENDAEYFEYTYQEGQSRIRFCSLKRRIDNVLGVPISDELYDLETPYGYGGPLSNSED
QGFLNRAFAAYKSHCKQHNIVCEFIRFHPLNPLAKHSFLFNMCRIERHVVAVELTEKDTRRSQYSKTTRNIIKKAESQLD
IEHNALEIDQFSQFYFHTMERNKAEKFYFFDNSYFHALLATGWTELLAVKYQGTYASLGLFMIGNELAHYHLSANNHELM
HKNGNYLLLDAAFELARSHGCQYMLLGGGRTAQKEDSLFLFKSKFSKKTLPFYIAGIDFMPEKRIELNKLWCELSTTAEI
PARFQLYRALEPNHG

Sequences:

>Translated_335_residues
MIELDVNALASDIYYRRSYISLYENDAEYFEYTYQEGQSRIRFCSLKRRIDNVLGVPISDELYDLETPYGYGGPLSNSED
QGFLNRAFAAYKSHCKQHNIVCEFIRFHPLNPLAKHSFLFNMCRIERHVVAVELTEKDTRRSQYSKTTRNIIKKAESQLD
IEHNALEIDQFSQFYFHTMERNKAEKFYFFDNSYFHALLATGWTELLAVKYQGTYASLGLFMIGNELAHYHLSANNHELM
HKNGNYLLLDAAFELARSHGCQYMLLGGGRTAQKEDSLFLFKSKFSKKTLPFYIAGIDFMPEKRIELNKLWCELSTTAEI
PARFQLYRALEPNHG
>Mature_335_residues
MIELDVNALASDIYYRRSYISLYENDAEYFEYTYQEGQSRIRFCSLKRRIDNVLGVPISDELYDLETPYGYGGPLSNSED
QGFLNRAFAAYKSHCKQHNIVCEFIRFHPLNPLAKHSFLFNMCRIERHVVAVELTEKDTRRSQYSKTTRNIIKKAESQLD
IEHNALEIDQFSQFYFHTMERNKAEKFYFFDNSYFHALLATGWTELLAVKYQGTYASLGLFMIGNELAHYHLSANNHELM
HKNGNYLLLDAAFELARSHGCQYMLLGGGRTAQKEDSLFLFKSKFSKKTLPFYIAGIDFMPEKRIELNKLWCELSTTAEI
PARFQLYRALEPNHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39111; Mature: 39111

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELDVNALASDIYYRRSYISLYENDAEYFEYTYQEGQSRIRFCSLKRRIDNVLGVPISD
CEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ELYDLETPYGYGGPLSNSEDQGFLNRAFAAYKSHCKQHNIVCEFIRFHPLNPLAKHSFLF
CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHH
NMCRIERHVVAVELTEKDTRRSQYSKTTRNIIKKAESQLDIEHNALEIDQFSQFYFHTME
HHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
RNKAEKFYFFDNSYFHALLATGWTELLAVKYQGTYASLGLFMIGNELAHYHLSANNHELM
CCCCCEEEEECCCHHHHHHHHCHHHEEEEEECCCHHHHHHEEECCHHEEEEECCCCCEEE
HKNGNYLLLDAAFELARSHGCQYMLLGGGRTAQKEDSLFLFKSKFSKKTLPFYIAGIDFM
ECCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEECCCCC
PEKRIELNKLWCELSTTAEIPARFQLYRALEPNHG
CCCCCCHHHHEEEECCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MIELDVNALASDIYYRRSYISLYENDAEYFEYTYQEGQSRIRFCSLKRRIDNVLGVPISD
CEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ELYDLETPYGYGGPLSNSEDQGFLNRAFAAYKSHCKQHNIVCEFIRFHPLNPLAKHSFLF
CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHH
NMCRIERHVVAVELTEKDTRRSQYSKTTRNIIKKAESQLDIEHNALEIDQFSQFYFHTME
HHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
RNKAEKFYFFDNSYFHALLATGWTELLAVKYQGTYASLGLFMIGNELAHYHLSANNHELM
CCCCCEEEEECCCHHHHHHHHCHHHEEEEEECCCHHHHHHEEECCHHEEEEECCCCCEEE
HKNGNYLLLDAAFELARSHGCQYMLLGGGRTAQKEDSLFLFKSKFSKKTLPFYIAGIDFM
ECCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEECCCCC
PEKRIELNKLWCELSTTAEIPARFQLYRALEPNHG
CCCCCCHHHHEEEECCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA