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The map label for this gene is epsN [H]

Identifier: 119775464

GI number: 119775464

Start: 2794887

End: 2796044

Strand: Direct

Name: epsN [H]

Synonym: Sama_2329

Alternate gene names: 119775464

Gene position: 2794887-2796044 (Clockwise)

Preceding gene: 119775463

Following gene: 119775465

Centisome position: 64.9

GC content: 50.0

Gene sequence:

>1158_bases
ATGAAGCCTGAAACGCTCGTTGAGTTTGTACGAGACATATACCAAAGCAATGAGCAAATCCCTTTGCATGTGCCGAGCTT
CGACGGCAATGAAAAGTCGTATGTACTCAACTGCATAGACAGCACTTTTGTGTCGAGTGTCGGCCAATATGTCAACAGGT
TTGAACGCCAGATAGCGGACTTTACCGGTTGTGCCGGCGCCGTCGCAACCGTCAATGGTACTGCTGCTCTGCATACAGCT
CTTCACCTCGCAGGGGTTGAGCGTAACGACTTGGTGATCACTCAGGCCCTGACATTTGTCGCAACGGCAAATGCGTTGTT
TCATATGGGCGCGCAGCCGATATTTGTCGATATCTCACCACTGAGCTTGGGGCTGTGCCCAAAAGCGGTAGCGTGTTATC
TGCAGGAAAACGCGAAACTGACAGAGTTTGGCCCCGTTCATAAGCAAACTGGGCAAAGAATTAAGGCTGTGGTGCCAATG
CACACATTTGGGCATCCGGTGGAACTTGACGAACTGGTCAGTGTTTGCGCCAAATGGCAACTCACCCTGGTCGAGGATGC
AGCAGAAAGTCTTGGATCCTATTACAAGGGGCACCATACCGGAACCGTAGGAAAATTCGGTGCCATCAGCTTTAACGGTA
ATAAAATCATCACCACAGGAGGCGGCGGTATGCTGCTTTGCAGCGATGAGCAAAGCGCATTGCATGCAAAACATGTGACC
ACCACAGCCAAAGTACCCCACCCCTATGAGTTTTATCATGATGAGCCGGGATTTAATTACCGAATGCCTAATATCAATGC
TGCATTGGGTTGTGCTCAGATGGAATGTTTACCGCAATATCTCGCTCAAAAACGGCAGCTTGCCCATCAGTACGAAGCAT
TATTTGCGTCGAGTGACCTTAAATTCGTCACAGAGCCGGCATATGCCCAATCTAACTACTGGCTCAATGCCATCGTTTGT
GCTGATCGTCAACAGCGTGACCAGTTACTGCAATTTACCAATGTTGCAGGTGTTATGACCCGGCCTGTTTGGCAGCTGAT
GCACCGTTTGCCCATGTATCAATACAGTCTTCGGGGTGAATTGACCAACGCCGAGTTCTTTGAAGCCCGCTTGATTAACC
TGCCCAGCACGCCGGTAGCCGAGGTGGTCAATGATTGA

Upstream 100 bases:

>100_bases
AGTAAGGCTGAACTGGTCGAAGTGTTCACCAGGATGATACCTGACTTTGGACACAAGGAAACCGGTAAGTACCTTGACAG
TAAGATGTGAGACCAACGAC

Downstream 100 bases:

>100_bases
ACTGGATGTTAATGCATTAGCCTCAGATATTTACTACCGGCGAAGCTATATTTCCTTGTATGAGAATGACGCTGAATACT
TTGAGTATACTTATCAAGAA

Product: pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKPETLVEFVRDIYQSNEQIPLHVPSFDGNEKSYVLNCIDSTFVSSVGQYVNRFERQIADFTGCAGAVATVNGTAALHTA
LHLAGVERNDLVITQALTFVATANALFHMGAQPIFVDISPLSLGLCPKAVACYLQENAKLTEFGPVHKQTGQRIKAVVPM
HTFGHPVELDELVSVCAKWQLTLVEDAAESLGSYYKGHHTGTVGKFGAISFNGNKIITTGGGGMLLCSDEQSALHAKHVT
TTAKVPHPYEFYHDEPGFNYRMPNINAALGCAQMECLPQYLAQKRQLAHQYEALFASSDLKFVTEPAYAQSNYWLNAIVC
ADRQQRDQLLQFTNVAGVMTRPVWQLMHRLPMYQYSLRGELTNAEFFEARLINLPSTPVAEVVND

Sequences:

>Translated_385_residues
MKPETLVEFVRDIYQSNEQIPLHVPSFDGNEKSYVLNCIDSTFVSSVGQYVNRFERQIADFTGCAGAVATVNGTAALHTA
LHLAGVERNDLVITQALTFVATANALFHMGAQPIFVDISPLSLGLCPKAVACYLQENAKLTEFGPVHKQTGQRIKAVVPM
HTFGHPVELDELVSVCAKWQLTLVEDAAESLGSYYKGHHTGTVGKFGAISFNGNKIITTGGGGMLLCSDEQSALHAKHVT
TTAKVPHPYEFYHDEPGFNYRMPNINAALGCAQMECLPQYLAQKRQLAHQYEALFASSDLKFVTEPAYAQSNYWLNAIVC
ADRQQRDQLLQFTNVAGVMTRPVWQLMHRLPMYQYSLRGELTNAEFFEARLINLPSTPVAEVVND
>Mature_385_residues
MKPETLVEFVRDIYQSNEQIPLHVPSFDGNEKSYVLNCIDSTFVSSVGQYVNRFERQIADFTGCAGAVATVNGTAALHTA
LHLAGVERNDLVITQALTFVATANALFHMGAQPIFVDISPLSLGLCPKAVACYLQENAKLTEFGPVHKQTGQRIKAVVPM
HTFGHPVELDELVSVCAKWQLTLVEDAAESLGSYYKGHHTGTVGKFGAISFNGNKIITTGGGGMLLCSDEQSALHAKHVT
TTAKVPHPYEFYHDEPGFNYRMPNINAALGCAQMECLPQYLAQKRQLAHQYEALFASSDLKFVTEPAYAQSNYWLNAIVC
ADRQQRDQLLQFTNVAGVMTRPVWQLMHRLPMYQYSLRGELTNAEFFEARLINLPSTPVAEVVND

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=379, Percent_Identity=25.8575197889182, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI2367285, Length=371, Percent_Identity=26.6846361185984, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42548; Mature: 42548

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPETLVEFVRDIYQSNEQIPLHVPSFDGNEKSYVLNCIDSTFVSSVGQYVNRFERQIAD
CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
FTGCAGAVATVNGTAALHTALHLAGVERNDLVITQALTFVATANALFHMGAQPIFVDISP
HCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEECC
LSLGLCPKAVACYLQENAKLTEFGPVHKQTGQRIKAVVPMHTFGHPVELDELVSVCAKWQ
CCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECHHHCCCCCCHHHHHHHHHHHH
LTLVEDAAESLGSYYKGHHTGTVGKFGAISFNGNKIITTGGGGMLLCSDEQSALHAKHVT
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCCCHHHHHHHCE
TTAKVPHPYEFYHDEPGFNYRMPNINAALGCAQMECLPQYLAQKRQLAHQYEALFASSDL
EECCCCCCHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KFVTEPAYAQSNYWLNAIVCADRQQRDQLLQFTNVAGVMTRPVWQLMHRLPMYQYSLRGE
CEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCC
LTNAEFFEARLINLPSTPVAEVVND
CCCCHHHHHEEECCCCCCHHHHHCC
>Mature Secondary Structure
MKPETLVEFVRDIYQSNEQIPLHVPSFDGNEKSYVLNCIDSTFVSSVGQYVNRFERQIAD
CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
FTGCAGAVATVNGTAALHTALHLAGVERNDLVITQALTFVATANALFHMGAQPIFVDISP
HCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEECC
LSLGLCPKAVACYLQENAKLTEFGPVHKQTGQRIKAVVPMHTFGHPVELDELVSVCAKWQ
CCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECHHHCCCCCCHHHHHHHHHHHH
LTLVEDAAESLGSYYKGHHTGTVGKFGAISFNGNKIITTGGGGMLLCSDEQSALHAKHVT
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCCCHHHHHHHCE
TTAKVPHPYEFYHDEPGFNYRMPNINAALGCAQMECLPQYLAQKRQLAHQYEALFASSDL
EECCCCCCHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KFVTEPAYAQSNYWLNAIVCADRQQRDQLLQFTNVAGVMTRPVWQLMHRLPMYQYSLRGE
CEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCC
LTNAEFFEARLINLPSTPVAEVVND
CCCCHHHHHEEECCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]